RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 IGHV3-49A0A0A0MS15 119 aa15.55■□□□□ 0.08
NEDD8-201ENST00000250495 LYRM1O43325 122 aa15.55■□□□□ 0.08
NEDD8-201ENST00000250495 IGHV3-48P01763 117 aa15.55■□□□□ 0.08
NEDD8-201ENST00000250495 SNCAP37840 140 aa15.55■□□□□ 0.08
NEDD8-201ENST00000250495 TFPI2P48307 235 aa15.55■□□□□ 0.08
NEDD8-201ENST00000250495 EWSR1Q01844 656 aaKnown RBP eCLIP15.55■□□□□ 0.08
NEDD8-201ENST00000250495 CEMP1Q6PRD7 247 aaPredicted RBP15.55■□□□□ 0.08
NEDD8-201ENST00000250495 DUSP18Q8NEJ0 188 aa15.55■□□□□ 0.08
NEDD8-201ENST00000250495 ENKURQ8TC29 256 aa15.55■□□□□ 0.08
NEDD8-201ENST00000250495 SMIM4Q8WVI0 70 aa15.55■□□□□ 0.08
NEDD8-201ENST00000250495 ABHD1Q96SE0 405 aa15.55■□□□□ 0.08
NEDD8-201ENST00000250495 CSTL1Q9H114 145 aa15.55■□□□□ 0.08
NEDD8-201ENST00000250495 BIRC6Q9NR09 4857 aa15.55■□□□□ 0.08
NEDD8-201ENST00000250495 ALMS1Q8TCU4 4167 aa15.55■□□□□ 0.08
NEDD8-201ENST00000250495 IGKV3-7A0A075B6H7 116 aa15.54■□□□□ 0.08
NEDD8-201ENST00000250495 LY6G6CO95867 125 aa15.54■□□□□ 0.08
NEDD8-201ENST00000250495 PIGPP57054 158 aa15.54■□□□□ 0.08
NEDD8-201ENST00000250495 RNASE10Q5GAN6 216 aaKnown RBP15.54■□□□□ 0.08
NEDD8-201ENST00000250495 FAM90A2PQ658T7 463 aa15.54■□□□□ 0.08
NEDD8-201ENST00000250495 ARRDC1Q8N5I2 433 aa15.54■□□□□ 0.08
NEDD8-201ENST00000250495 KLK11Q9UBX7 282 aa15.54■□□□□ 0.08
NEDD8-201ENST00000250495 KLK5Q9Y337 293 aaPredicted RBP15.54■□□□□ 0.08
NEDD8-201ENST00000250495 MPTX1A8MV57 137 aa15.53■□□□□ 0.08
NEDD8-201ENST00000250495 INS-IGF2F8WCM5 200 aa15.53■□□□□ 0.08
NEDD8-201ENST00000250495 SUB1P53999 127 aaKnown RBP eCLIP15.53■□□□□ 0.086e-8■■■■□ 23
NEDD8-201ENST00000250495 TOMM20LQ6UXN7 152 aa15.53■□□□□ 0.08
NEDD8-201ENST00000250495 LHFPL1Q86WI0 220 aa15.53■□□□□ 0.08
NEDD8-201ENST00000250495 SLC35G3Q8N808 338 aa15.53■□□□□ 0.08
NEDD8-201ENST00000250495 PDCD10Q9BUL8 212 aa15.53■□□□□ 0.08
NEDD8-201ENST00000250495 IGHV3OR16-13A0A075B7E8 117 aa15.52■□□□□ 0.08
NEDD8-201ENST00000250495 IGHV3-74A0A0B4J1X5 117 aa15.52■□□□□ 0.08
NEDD8-201ENST00000250495 IFNA17P01571 189 aa15.52■□□□□ 0.08
NEDD8-201ENST00000250495 IGKV1-5P01602 117 aa15.52■□□□□ 0.08
NEDD8-201ENST00000250495 PI3P19957 117 aa15.52■□□□□ 0.08
NEDD8-201ENST00000250495 TBPP20226 339 aa15.52■□□□□ 0.08
NEDD8-201ENST00000250495 AKR1C2P52895 323 aa15.52■□□□□ 0.08
NEDD8-201ENST00000250495 IZUMO4Q1ZYL8 232 aa15.52■□□□□ 0.08
NEDD8-201ENST00000250495 SPINK9Q5DT21 86 aa15.52■□□□□ 0.08
NEDD8-201ENST00000250495 TCF24Q7RTU0 167 aa15.52■□□□□ 0.08
NEDD8-201ENST00000250495 GBGT1Q8N5D6 347 aa15.52■□□□□ 0.08
NEDD8-201ENST00000250495 GATAD1Q8WUU5 269 aa15.52■□□□□ 0.08
NEDD8-201ENST00000250495 A0A0B4J293 547 aa15.51■□□□□ 0.07
NEDD8-201ENST00000250495 C3orf85A0A1B0GTC6 90 aa15.51■□□□□ 0.07
NEDD8-201ENST00000250495 CENPXA8MT69 81 aa15.51■□□□□ 0.07
NEDD8-201ENST00000250495 GABARAPH6UMI1 98 aa15.51■□□□□ 0.07
NEDD8-201ENST00000250495 CORTO00230 105 aa15.51■□□□□ 0.07
NEDD8-201ENST00000250495 CD3DP04234 171 aa15.51■□□□□ 0.07
NEDD8-201ENST00000250495 ZNF124Q15973 351 aa15.51■□□□□ 0.07
NEDD8-201ENST00000250495 RNASE12Q5GAN4 147 aaKnown RBP15.51■□□□□ 0.07
NEDD8-201ENST00000250495 ZNF600Q6ZNG1 722 aa15.51■□□□□ 0.07
NEDD8-201ENST00000250495 OR52I2Q8NH67 350 aa15.51■□□□□ 0.07
NEDD8-201ENST00000250495 ZFAND1Q8TCF1 268 aa15.51■□□□□ 0.07
NEDD8-201ENST00000250495 DEDD2Q8WXF8 326 aa15.51■□□□□ 0.07
NEDD8-201ENST00000250495 TP53RKQ96S44 253 aa15.51■□□□□ 0.07
NEDD8-201ENST00000250495 VSIRQ9H7M9 311 aa15.51■□□□□ 0.07
NEDD8-201ENST00000250495 COPZ2Q9P299 210 aa15.51■□□□□ 0.07
NEDD8-201ENST00000250495 MTFP1Q9UDX5 166 aa15.51■□□□□ 0.07
NEDD8-201ENST00000250495 LINC00854A0A1B0GVQ3 168 aa15.5■□□□□ 0.07
NEDD8-201ENST00000250495 FAM240BA0A1B0GVZ2 78 aa15.5■□□□□ 0.07
NEDD8-201ENST00000250495 DNASE2O00115 360 aaPredicted RBP15.5■□□□□ 0.07
NEDD8-201ENST00000250495 ST8SIA3O43173 380 aa15.5■□□□□ 0.07
NEDD8-201ENST00000250495 TMEM50AO95807 157 aa15.5■□□□□ 0.07
NEDD8-201ENST00000250495 P0C879 139 aa15.5■□□□□ 0.07
NEDD8-201ENST00000250495 AP3S2P59780 193 aa15.5■□□□□ 0.07
NEDD8-201ENST00000250495 CCDC71LQ8N9Z2 235 aa15.5■□□□□ 0.07
NEDD8-201ENST00000250495 TERB2Q8NHR7 220 aa15.5■□□□□ 0.07
NEDD8-201ENST00000250495 RARRES2Q99969 163 aa15.5■□□□□ 0.07
NEDD8-201ENST00000250495 ENY2Q9NPA8 101 aa15.5■□□□□ 0.07
NEDD8-201ENST00000250495 PUS1Q9Y606 427 aaKnown RBP eCLIP15.5■□□□□ 0.07
NEDD8-201ENST00000250495 PVRIGQ6DKI7 326 aa15.49■□□□□ 0.07
NEDD8-201ENST00000250495 TOMM5Q8N4H5 51 aa15.49■□□□□ 0.07
NEDD8-201ENST00000250495 ST8SIA2Q92186 375 aa15.49■□□□□ 0.07
NEDD8-201ENST00000250495 RRNAD1Q96FB5 475 aaKnown RBP15.49■□□□□ 0.07
NEDD8-201ENST00000250495 TMEM231Q9H6L2 316 aa15.49■□□□□ 0.07
NEDD8-201ENST00000250495 B3GALNT1O75752 331 aa15.48■□□□□ 0.07
NEDD8-201ENST00000250495 DFFBO76075 338 aa15.48■□□□□ 0.07
NEDD8-201ENST00000250495 RPL11P62913 178 aaKnown RBP15.48■□□□□ 0.07
NEDD8-201ENST00000250495 AKAP14Q86UN6 197 aa15.48■□□□□ 0.07
NEDD8-201ENST00000250495 TMEM229BQ8NBD8 167 aa15.48■□□□□ 0.07
NEDD8-201ENST00000250495 MARVELD1Q9BSK0 173 aa15.48■□□□□ 0.07
NEDD8-201ENST00000250495 MS4A6AQ9H2W1 248 aa15.48■□□□□ 0.07
NEDD8-201ENST00000250495 ZFAND3Q9H8U3 227 aa15.48■□□□□ 0.07
NEDD8-201ENST00000250495 TRAV2A0A0B4J234 112 aa15.47■□□□□ 0.07
NEDD8-201ENST00000250495 A0A1W2PS18 150 aa15.47■□□□□ 0.07
NEDD8-201ENST00000250495 NAP1L6A6NFF2 107 aa15.47■□□□□ 0.07
NEDD8-201ENST00000250495 SCGB2A1O75556 95 aa15.47■□□□□ 0.07
NEDD8-201ENST00000250495 APOHP02749 345 aaPredicted RBP15.47■□□□□ 0.07
NEDD8-201ENST00000250495 RNASE2P10153 161 aaKnown RBP15.47■□□□□ 0.07
NEDD8-201ENST00000250495 NPPCP23582 126 aa15.47■□□□□ 0.07
NEDD8-201ENST00000250495 UCP1P25874 307 aa15.47■□□□□ 0.07
NEDD8-201ENST00000250495 HOXA1P49639 335 aaPredicted RBP15.47■□□□□ 0.07
NEDD8-201ENST00000250495 TAS2R19P59542 299 aa15.47■□□□□ 0.07
NEDD8-201ENST00000250495 KLF9Q13886 244 aaPredicted RBP15.47■□□□□ 0.07
NEDD8-201ENST00000250495 SP6Q3SY56 376 aa15.47■□□□□ 0.07
NEDD8-201ENST00000250495 LILRB2Q8N423 598 aa15.47■□□□□ 0.07
NEDD8-201ENST00000250495 RNASE11Q8TAA1 199 aaKnown RBP15.47■□□□□ 0.07
NEDD8-201ENST00000250495 PHLDA1Q8WV24 401 aaPredicted RBP15.47■□□□□ 0.07
NEDD8-201ENST00000250495 BOLA2-SMG1P6H3BVE0 249 aa15.46■□□□□ 0.07
NEDD8-201ENST00000250495 CLN5O75503 358 aa15.46■□□□□ 0.07
NEDD8-201ENST00000250495 RAB3DO95716 219 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms