RNA–Protein interactions for RNA: ENST00000245544.8

NUP85-201, Transcript of nucleoporin 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP85, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-201ENST00000245544 A0A096LNT2 108 aa10.64□□□□□ -0.71
NUP85-201ENST00000245544 A0A1W2PPV4 95 aa10.64□□□□□ -0.71
NUP85-201ENST00000245544 HSPB1P04792 205 aaKnown RBP10.64□□□□□ -0.71
NUP85-201ENST00000245544 PLA2G2AP14555 144 aa10.64□□□□□ -0.71
NUP85-201ENST00000245544 ZNF90Q03938 601 aa10.64□□□□□ -0.71
NUP85-201ENST00000245544 WNT10AQ9GZT5 417 aa10.64□□□□□ -0.71
NUP85-201ENST00000245544 TMA7Q9Y2S6 64 aaKnown RBP10.64□□□□□ -0.71
NUP85-201ENST00000245544 DNASE2O00115 360 aaPredicted RBP10.63□□□□□ -0.71
NUP85-201ENST00000245544 AVPP01185 164 aa10.63□□□□□ -0.71
NUP85-201ENST00000245544 RND2P52198 227 aa10.63□□□□□ -0.71
NUP85-201ENST00000245544 DSCR9P59020 149 aa10.63□□□□□ -0.71
NUP85-201ENST00000245544 KLF17Q5JT82 389 aaPredicted RBP10.63□□□□□ -0.71
NUP85-201ENST00000245544 SMDT1Q9H4I9 107 aa10.63□□□□□ -0.71
NUP85-201ENST00000245544 HIF1ANQ9NWT6 349 aa10.63□□□□□ -0.71
NUP85-201ENST00000245544 IGHV1-69DA0A0B4J2H0 117 aa10.63□□□□□ -0.71
NUP85-201ENST00000245544 SOX15O60248 233 aa10.63□□□□□ -0.71
NUP85-201ENST00000245544 IGHV1-69P01742 117 aa10.63□□□□□ -0.71
NUP85-201ENST00000245544 CRYGCP07315 174 aa10.63□□□□□ -0.71
NUP85-201ENST00000245544 FAM106CPP0CH98 169 aa10.63□□□□□ -0.71
NUP85-201ENST00000245544 CTRB1P17538 263 aa10.63□□□□□ -0.71
NUP85-201ENST00000245544 AKIRIN2Q53H80 203 aa10.63□□□□□ -0.71
NUP85-201ENST00000245544 SOHLH1Q5JUK2 328 aa10.63□□□□□ -0.71
NUP85-201ENST00000245544 ASPHD1Q5U4P2 390 aa10.63□□□□□ -0.71
NUP85-201ENST00000245544 CTRB2Q6GPI1 263 aa10.63□□□□□ -0.71
NUP85-201ENST00000245544 TMEM88Q6PEY1 159 aa10.63□□□□□ -0.71
NUP85-201ENST00000245544 MRPL41Q8IXM3 137 aaKnown RBP10.63□□□□□ -0.71
NUP85-201ENST00000245544 Q8N9W7 124 aa10.63□□□□□ -0.71
NUP85-201ENST00000245544 CLRN3Q8NCR9 226 aa10.63□□□□□ -0.71
NUP85-201ENST00000245544 C20orf24Q9BUV8 137 aa10.63□□□□□ -0.71
NUP85-201ENST00000245544 GSX1Q9H4S2 264 aaPredicted RBP10.63□□□□□ -0.71
NUP85-201ENST00000245544 C7orf69Q9H7B7 122 aa10.63□□□□□ -0.71
NUP85-201ENST00000245544 GCN1Q92616 2671 aaKnown RBP10.62□□□□□ -0.71
NUP85-201ENST00000245544 A0A0U1RQK1 487 aa10.62□□□□□ -0.71
NUP85-201ENST00000245544 SNAPINO95295 136 aa10.62□□□□□ -0.71
NUP85-201ENST00000245544 MT-CO2P00403 227 aa10.62□□□□□ -0.71
NUP85-201ENST00000245544 ARL14EPLP0DKL9 152 aa10.62□□□□□ -0.71
NUP85-201ENST00000245544 AKR1C3P42330 323 aa10.62□□□□□ -0.71
NUP85-201ENST00000245544 CD81P60033 236 aa10.62□□□□□ -0.71
NUP85-201ENST00000245544 ZNF562Q6V9R5 426 aa10.62□□□□□ -0.71
NUP85-201ENST00000245544 CYP2G1PQ6ZSU1 146 aa10.62□□□□□ -0.71
NUP85-201ENST00000245544 SLC35E3Q7Z769 313 aa10.62□□□□□ -0.71
NUP85-201ENST00000245544 KCNIP2Q9NS61 270 aa10.62□□□□□ -0.71
NUP85-201ENST00000245544 TEX15Q9BXT5 2789 aa10.62□□□□□ -0.71
NUP85-201ENST00000245544 CREBBPQ92793 2442 aa10.62□□□□□ -0.71
NUP85-201ENST00000245544 SH2D7A6NKC9 451 aaPredicted RBP10.61□□□□□ -0.71
NUP85-201ENST00000245544 B4DSR2 109 aa10.61□□□□□ -0.71
NUP85-201ENST00000245544 STAG3L2P0CL84 134 aa10.61□□□□□ -0.71
NUP85-201ENST00000245544 STAG3L3P0CL85 134 aa10.61□□□□□ -0.71
NUP85-201ENST00000245544 SLC25A16P16260 332 aa10.61□□□□□ -0.71
NUP85-201ENST00000245544 PMS2P11Q13670 270 aa10.61□□□□□ -0.71
NUP85-201ENST00000245544 FAM78BQ5VT40 261 aa10.61□□□□□ -0.71
NUP85-201ENST00000245544 MIR17HGQ75NE6 70 aa10.61□□□□□ -0.71
NUP85-201ENST00000245544 CBLN2Q8IUK8 224 aa10.61□□□□□ -0.71
NUP85-201ENST00000245544 THAP8Q8NA92 274 aa10.61□□□□□ -0.71
NUP85-201ENST00000245544 TMEM37Q8WXS4 190 aa10.61□□□□□ -0.71
NUP85-201ENST00000245544 HSPB9Q9BQS6 159 aa10.61□□□□□ -0.71
NUP85-201ENST00000245544 VAX2Q9UIW0 290 aa10.61□□□□□ -0.71
NUP85-201ENST00000245544 CCDC168Q8NDH2 2452 aa10.61□□□□□ -0.71
NUP85-201ENST00000245544 IGHV7-81A0A0B4J1V7 117 aa10.61□□□□□ -0.71
NUP85-201ENST00000245544 PAGE4O60829 102 aa10.61□□□□□ -0.71
NUP85-201ENST00000245544 EGR2P11161 476 aaPredicted RBP10.61□□□□□ -0.71
NUP85-201ENST00000245544 BRS3P32247 399 aa10.61□□□□□ -0.71
NUP85-201ENST00000245544 FAM90A2PQ658T7 463 aa10.61□□□□□ -0.71
NUP85-201ENST00000245544 ARPC1AQ92747 370 aa10.61□□□□□ -0.71
NUP85-201ENST00000245544 PUS1Q9Y606 427 aaKnown RBP eCLIP10.61□□□□□ -0.71
NUP85-201ENST00000245544 ITPR2Q14571 2701 aa10.61□□□□□ -0.71
NUP85-201ENST00000245544 TCRBV4S1A1TA0A5B7 111 aa10.6□□□□□ -0.71
NUP85-201ENST00000245544 I3L2K1 104 aa10.6□□□□□ -0.71
NUP85-201ENST00000245544 UBE2G2P60604 165 aa10.6□□□□□ -0.71
NUP85-201ENST00000245544 RHOBP62745 196 aa10.6□□□□□ -0.71
NUP85-201ENST00000245544 MORN5Q5VZ52 161 aa10.6□□□□□ -0.71
NUP85-201ENST00000245544 RBMS3Q6XE24 437 aaKnown RBP10.6□□□□□ -0.71
NUP85-201ENST00000245544 SPNS3Q6ZMD2 512 aa10.6□□□□□ -0.71
NUP85-201ENST00000245544 PIFOQ8TCI5 191 aa10.6□□□□□ -0.71
NUP85-201ENST00000245544 SRSF8Q9BRL6 282 aaKnown RBP10.6□□□□□ -0.71
NUP85-201ENST00000245544 DOK5Q9P104 306 aa10.6□□□□□ -0.71
NUP85-201ENST00000245544 PSMB11A5LHX3 300 aa10.6□□□□□ -0.71
NUP85-201ENST00000245544 J3QKU1 62 aa10.6□□□□□ -0.71
NUP85-201ENST00000245544 IFNA1P01562 189 aa10.6□□□□□ -0.71
NUP85-201ENST00000245544 MEF2BQ02080 365 aaPredicted RBP10.6□□□□□ -0.71
NUP85-201ENST00000245544 KIAA0141Q14154 515 aaPredicted RBP10.6□□□□□ -0.71
NUP85-201ENST00000245544 DEFB113Q30KQ7 82 aa10.6□□□□□ -0.71
NUP85-201ENST00000245544 AWAT1Q58HT5 328 aa10.6□□□□□ -0.71
NUP85-201ENST00000245544 TMEM219Q86XT9 240 aa10.6□□□□□ -0.71
NUP85-201ENST00000245544 MXRA5Q9NR99 2828 aa10.59□□□□□ -0.71
NUP85-201ENST00000245544 LINC01548A6NM66 108 aa10.59□□□□□ -0.71
NUP85-201ENST00000245544 RNF223E7ERA6 249 aa10.59□□□□□ -0.71
NUP85-201ENST00000245544 K7EIM0 57 aa10.59□□□□□ -0.71
NUP85-201ENST00000245544 M0R036 132 aa10.59□□□□□ -0.71
NUP85-201ENST00000245544 PSMB3P49720 205 aa10.59□□□□□ -0.71
NUP85-201ENST00000245544 ETFRF1Q6IPR1 90 aa10.59□□□□□ -0.71
NUP85-201ENST00000245544 PATE2Q6UY27 113 aa10.59□□□□□ -0.71
NUP85-201ENST00000245544 TMEM116Q8NCL8 245 aa10.59□□□□□ -0.71
NUP85-201ENST00000245544 FUT9Q9Y231 359 aa10.59□□□□□ -0.71
NUP85-201ENST00000245544 ITPR3Q14573 2671 aa10.59□□□□□ -0.71
NUP85-201ENST00000245544 CR1P17927 2039 aa10.59□□□□□ -0.71
NUP85-201ENST00000245544 TRAV5A0A0B4J249 113 aa10.58□□□□□ -0.72
NUP85-201ENST00000245544 H3BQ15 152 aa10.58□□□□□ -0.72
NUP85-201ENST00000245544 ATP5G3P48201 142 aa10.58□□□□□ -0.72
NUP85-201ENST00000245544 TMEM249Q2WGJ8 235 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms