RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 SMG1Q96Q15 3661 aaKnown RBP9.6□□□□□ -0.87
SOX9-201ENST00000245479 J3QR06 171 aa9.6□□□□□ -0.87
SOX9-201ENST00000245479 CECR9P0C854 216 aa9.6□□□□□ -0.87
SOX9-201ENST00000245479 ZADH2Q8N4Q0 377 aa9.6□□□□□ -0.87
SOX9-201ENST00000245479 ADTRPQ96IZ2 230 aa9.6□□□□□ -0.87
SOX9-201ENST00000245479 PGLYRP4Q96LB8 373 aa9.6□□□□□ -0.87
SOX9-201ENST00000245479 RNF115Q9Y4L5 304 aa9.6□□□□□ -0.87
SOX9-201ENST00000245479 AMMECR1Q9Y4X0 333 aaPredicted RBP9.6□□□□□ -0.87
SOX9-201ENST00000245479 H3BTX0 84 aa9.6□□□□□ -0.87
SOX9-201ENST00000245479 ACP1P24666 158 aa9.6□□□□□ -0.87
SOX9-201ENST00000245479 MUC15Q8N387 334 aa9.6□□□□□ -0.87
SOX9-201ENST00000245479 SARAFQ96BY9 339 aa9.6□□□□□ -0.87
SOX9-201ENST00000245479 FLYWCH2Q96CP2 140 aaKnown RBP9.6□□□□□ -0.87
SOX9-201ENST00000245479 ARHGAP32A7KAX9 2087 aa9.59□□□□□ -0.87
SOX9-201ENST00000245479 DNPH1O43598 174 aa9.59□□□□□ -0.87
SOX9-201ENST00000245479 OR10J3Q5JRS4 329 aa9.59□□□□□ -0.87
SOX9-201ENST00000245479 TEX43Q6ZNM6 134 aa9.59□□□□□ -0.87
SOX9-201ENST00000245479 ITLN1Q8WWA0 313 aa9.59□□□□□ -0.87
SOX9-201ENST00000245479 PYGO2Q9BRQ0 406 aa9.59□□□□□ -0.87
SOX9-201ENST00000245479 ZPBPQ9BS86 351 aa9.59□□□□□ -0.87
SOX9-201ENST00000245479 TCF19Q9Y242 345 aa9.59□□□□□ -0.87
SOX9-201ENST00000245479 CEP192Q8TEP8 1941 aa9.59□□□□□ -0.87
SOX9-201ENST00000245479 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.59□□□□□ -0.87
SOX9-201ENST00000245479 LOC389332A0A1B0GUA5 103 aa9.59□□□□□ -0.87
SOX9-201ENST00000245479 CCL25O15444 150 aa9.59□□□□□ -0.87
SOX9-201ENST00000245479 GNG7O60262 68 aa9.59□□□□□ -0.87
SOX9-201ENST00000245479 DUX4L9Q6RFH8 374 aaPredicted RBP9.59□□□□□ -0.87
SOX9-201ENST00000245479 TMEM14EPQ6UXP3 125 aa9.59□□□□□ -0.87
SOX9-201ENST00000245479 PAXXQ9BUH6 204 aa9.59□□□□□ -0.87
SOX9-201ENST00000245479 CST9LQ9H4G1 147 aa9.59□□□□□ -0.87
SOX9-201ENST00000245479 WDR83OSQ9Y284 106 aa9.59□□□□□ -0.87
SOX9-201ENST00000245479 IGHV1-69-2A0A0G2JMI3 117 aa9.59□□□□□ -0.87
SOX9-201ENST00000245479 H3BUT2 72 aa9.59□□□□□ -0.87
SOX9-201ENST00000245479 GCSHP23434 173 aa9.59□□□□□ -0.87
SOX9-201ENST00000245479 ARF6P62330 175 aa9.59□□□□□ -0.87
SOX9-201ENST00000245479 MRPS11P82912 194 aaKnown RBP9.59□□□□□ -0.87
SOX9-201ENST00000245479 NAA38Q9BRA0 125 aaKnown RBP9.59□□□□□ -0.87
SOX9-201ENST00000245479 DYNLRB1Q9NP97 96 aa9.59□□□□□ -0.87
SOX9-201ENST00000245479 A0A1W2PN81 502 aa9.58□□□□□ -0.88
SOX9-201ENST00000245479 CIDEAO60543 219 aa9.58□□□□□ -0.88
SOX9-201ENST00000245479 PRSS1P07477 247 aa9.58□□□□□ -0.88
SOX9-201ENST00000245479 OCIAD2Q56VL3 154 aa9.58□□□□□ -0.88
SOX9-201ENST00000245479 TMEM140Q9NV12 185 aa9.58□□□□□ -0.88
SOX9-201ENST00000245479 SONP18583 2426 aaKnown RBP9.58□□□□□ -0.88
SOX9-201ENST00000245479 TMEM265A0A087WTH1 108 aa9.58□□□□□ -0.88
SOX9-201ENST00000245479 RBFOX2O43251 390 aaKnown RBP eCLIP9.58□□□□□ -0.88
SOX9-201ENST00000245479 PRDX2P32119 198 aa9.58□□□□□ -0.88
SOX9-201ENST00000245479 SAMD13Q5VXD3 122 aa9.58□□□□□ -0.88
SOX9-201ENST00000245479 MIR17HGQ75NE6 70 aa9.58□□□□□ -0.88
SOX9-201ENST00000245479 WDR86Q86TI4 376 aa9.58□□□□□ -0.88
SOX9-201ENST00000245479 OR1B1Q8NGR6 318 aa9.58□□□□□ -0.88
SOX9-201ENST00000245479 F11RQ9Y624 299 aaKnown RBP9.58□□□□□ -0.88
SOX9-201ENST00000245479 TRAV17A0A0B4J275 112 aa9.58□□□□□ -0.88
SOX9-201ENST00000245479 GAGE12BA1L429 117 aa9.58□□□□□ -0.88
SOX9-201ENST00000245479 C7orf71A4D174 169 aa9.58□□□□□ -0.88
SOX9-201ENST00000245479 C8orf88P0DMB2 117 aa9.58□□□□□ -0.88
SOX9-201ENST00000245479 C10orf113Q5VZT2 155 aa9.58□□□□□ -0.88
SOX9-201ENST00000245479 KIR3DL3Q8N743 410 aa9.58□□□□□ -0.88
SOX9-201ENST00000245479 ZNF114Q8NC26 417 aa9.58□□□□□ -0.88
SOX9-201ENST00000245479 CLEC7AQ9BXN2 247 aa9.58□□□□□ -0.88
SOX9-201ENST00000245479 HILPDAQ9Y5L2 63 aa9.58□□□□□ -0.88
SOX9-201ENST00000245479 A0A1B0GV72 72 aa9.57□□□□□ -0.88
SOX9-201ENST00000245479 ADH4P08319 380 aa9.57□□□□□ -0.88
SOX9-201ENST00000245479 IGFBPL1Q8WX77 278 aa9.57□□□□□ -0.88
SOX9-201ENST00000245479 COL25A1Q9BXS0 654 aaPredicted RBP9.57□□□□□ -0.88
SOX9-201ENST00000245479 DYSFO75923 2080 aa9.57□□□□□ -0.88
SOX9-201ENST00000245479 C21orf140B9A014 251 aa9.57□□□□□ -0.88
SOX9-201ENST00000245479 LIPFP07098 398 aa9.57□□□□□ -0.88
SOX9-201ENST00000245479 IGFBP2P18065 325 aa9.57□□□□□ -0.88
SOX9-201ENST00000245479 LMO1P25800 156 aa9.57□□□□□ -0.88
SOX9-201ENST00000245479 TM4SF20Q53R12 229 aa9.57□□□□□ -0.88
SOX9-201ENST00000245479 YPEL4Q96NS1 127 aa9.57□□□□□ -0.88
SOX9-201ENST00000245479 NAV3Q8IVL0 2385 aa9.57□□□□□ -0.88
SOX9-201ENST00000245479 TRGV10A0A0A0MS01 117 aa9.57□□□□□ -0.88
SOX9-201ENST00000245479 REG1AP05451 166 aa9.57□□□□□ -0.88
SOX9-201ENST00000245479 GPR183P32249 361 aa9.57□□□□□ -0.88
SOX9-201ENST00000245479 MRPS18CQ9Y3D5 142 aaKnown RBP9.57□□□□□ -0.88
SOX9-201ENST00000245479 ASH1LQ9NR48 2969 aaKnown RBP9.56□□□□□ -0.88
SOX9-201ENST00000245479 A0A1W2PS18 150 aa9.56□□□□□ -0.88
SOX9-201ENST00000245479 IZUMO1RA6ND01 250 aa9.56□□□□□ -0.88
SOX9-201ENST00000245479 F2Z2F3 143 aa9.56□□□□□ -0.88
SOX9-201ENST00000245479 PDLIM4P50479 330 aa9.56□□□□□ -0.88
SOX9-201ENST00000245479 TNXAQ16473 311 aa9.56□□□□□ -0.88
SOX9-201ENST00000245479 TMEM177Q53S58 311 aa9.56□□□□□ -0.88
SOX9-201ENST00000245479 SPRNQ5BIV9 151 aa9.56□□□□□ -0.88
SOX9-201ENST00000245479 TMEM97Q5BJF2 176 aa9.56□□□□□ -0.88
SOX9-201ENST00000245479 FAM216BQ8N7L0 139 aa9.56□□□□□ -0.88
SOX9-201ENST00000245479 PKIBQ9C010 78 aa9.56□□□□□ -0.88
SOX9-201ENST00000245479 HIF1ANQ9NWT6 349 aa9.56□□□□□ -0.88
SOX9-201ENST00000245479 ABCA2Q9BZC7 2435 aa9.56□□□□□ -0.88
SOX9-201ENST00000245479 TRAV3A0A0B4J244 114 aa9.56□□□□□ -0.88
SOX9-201ENST00000245479 hDV102S1A0JD36 115 aa9.56□□□□□ -0.88
SOX9-201ENST00000245479 PGPA6NDG6 321 aa9.56□□□□□ -0.88
SOX9-201ENST00000245479 LYNX1G3V0Z9 82 aa9.56□□□□□ -0.88
SOX9-201ENST00000245479 ETV2O00321 342 aaPredicted RBP9.56□□□□□ -0.88
SOX9-201ENST00000245479 STAG3L2P0CL84 134 aa9.56□□□□□ -0.88
SOX9-201ENST00000245479 STAG3L3P0CL85 134 aa9.56□□□□□ -0.88
SOX9-201ENST00000245479 LYNX1P0DP58 116 aa9.56□□□□□ -0.88
SOX9-201ENST00000245479 OSTCQ9NRP0 149 aa9.56□□□□□ -0.88
SOX9-201ENST00000245479 MRPS16Q9Y3D3 137 aaKnown RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms