RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 NKX2-1P43699 371 aaPredicted RBP10.36□□□□□ -0.75
DDX39A-201ENST00000242776 HOXA1P49639 335 aaPredicted RBP10.36□□□□□ -0.75
DDX39A-201ENST00000242776 PRCDQ00LT1 54 aa10.36□□□□□ -0.75
DDX39A-201ENST00000242776 FCN2Q15485 313 aa10.36□□□□□ -0.75
DDX39A-201ENST00000242776 C10orf55Q5SWW7 151 aa10.36□□□□□ -0.75
DDX39A-201ENST00000242776 HSD17B13Q7Z5P4 300 aaPredicted RBP10.36□□□□□ -0.75
DDX39A-201ENST00000242776 OR4D5Q8NGN0 318 aa10.36□□□□□ -0.75
DDX39A-201ENST00000242776 TMEM68Q96MH6 324 aa10.36□□□□□ -0.75
DDX39A-201ENST00000242776 FYTTD1Q96QD9 318 aaKnown RBP10.36□□□□□ -0.75
DDX39A-201ENST00000242776 SRSF8Q9BRL6 282 aaKnown RBP10.36□□□□□ -0.75
DDX39A-201ENST00000242776 OVOL2Q9BRP0 275 aa10.36□□□□□ -0.75
DDX39A-201ENST00000242776 HINT2Q9BX68 163 aa10.36□□□□□ -0.75
DDX39A-201ENST00000242776 NMES1Q9C002 83 aa10.36□□□□□ -0.75
DDX39A-201ENST00000242776 hCG_2014768A0A024R1R8 64 aa10.35□□□□□ -0.75
DDX39A-201ENST00000242776 CEBPZOSA8MTT3 80 aa10.35□□□□□ -0.75
DDX39A-201ENST00000242776 BMPR1BO00238 502 aa10.35□□□□□ -0.75
DDX39A-201ENST00000242776 SIX6O95475 246 aa10.35□□□□□ -0.75
DDX39A-201ENST00000242776 SCGB1D2O95969 90 aa10.35□□□□□ -0.75
DDX39A-201ENST00000242776 TNFRSF9Q07011 255 aa10.35□□□□□ -0.75
DDX39A-201ENST00000242776 OR11H7Q8NGC8 314 aa10.35□□□□□ -0.75
DDX39A-201ENST00000242776 OR2K2Q8NGT1 345 aa10.35□□□□□ -0.75
DDX39A-201ENST00000242776 NDUFA4L2Q9NRX3 87 aa10.35□□□□□ -0.75
DDX39A-201ENST00000242776 HSPB7Q9UBY9 170 aa10.35□□□□□ -0.75
DDX39A-201ENST00000242776 NUPR2A6NF83 97 aa10.34□□□□□ -0.75
DDX39A-201ENST00000242776 HMX3A6NHT5 357 aa10.34□□□□□ -0.75
DDX39A-201ENST00000242776 PPP5D1E7EU14 171 aa10.34□□□□□ -0.75
DDX39A-201ENST00000242776 NXPH3O95157 252 aa10.34□□□□□ -0.75
DDX39A-201ENST00000242776 MYOD1P15172 320 aa10.34□□□□□ -0.75
DDX39A-201ENST00000242776 EXOSC2Q13868 293 aaKnown RBP10.34□□□□□ -0.75
DDX39A-201ENST00000242776 DEFB114Q30KQ6 69 aa10.34□□□□□ -0.75
DDX39A-201ENST00000242776 CACNG8Q8WXS5 425 aa10.34□□□□□ -0.75
DDX39A-201ENST00000242776 MSGN1A6NI15 193 aa10.33□□□□□ -0.76
DDX39A-201ENST00000242776 GIPP09681 153 aaPredicted RBP10.33□□□□□ -0.76
DDX39A-201ENST00000242776 PET100P0DJ07 73 aa10.33□□□□□ -0.76
DDX39A-201ENST00000242776 CXCL3P19876 107 aa10.33□□□□□ -0.76
DDX39A-201ENST00000242776 H2BFSP57053 126 aa10.33□□□□□ -0.76
DDX39A-201ENST00000242776 S100A10P60903 97 aa10.33□□□□□ -0.76
DDX39A-201ENST00000242776 ERHP84090 104 aaKnown RBP10.33□□□□□ -0.76
DDX39A-201ENST00000242776 RHOGP84095 191 aa10.33□□□□□ -0.76
DDX39A-201ENST00000242776 CEMP1Q6PRD7 247 aaPredicted RBP10.33□□□□□ -0.76
DDX39A-201ENST00000242776 DTD1Q8TEA8 209 aa10.33□□□□□ -0.76
DDX39A-201ENST00000242776 USMG5Q96IX5 58 aa10.33□□□□□ -0.76
DDX39A-201ENST00000242776 CIB3Q96Q77 187 aaPredicted RBP10.33□□□□□ -0.76
DDX39A-201ENST00000242776 GGTLC1Q9BX51 225 aa10.33□□□□□ -0.76
DDX39A-201ENST00000242776 ZNF436Q9C0F3 470 aaPredicted RBP10.33□□□□□ -0.76
DDX39A-201ENST00000242776 HECTD4Q9Y4D8 3996 aa10.33□□□□□ -0.76
DDX39A-201ENST00000242776 TEX22C9J3V5 150 aa10.32□□□□□ -0.76
DDX39A-201ENST00000242776 SYNGR2O43760 224 aa10.32□□□□□ -0.76
DDX39A-201ENST00000242776 FOLR2P14207 255 aa10.32□□□□□ -0.76
DDX39A-201ENST00000242776 PVALBP20472 110 aaPredicted RBP10.32□□□□□ -0.76
DDX39A-201ENST00000242776 ID3Q02535 119 aa10.32□□□□□ -0.76
DDX39A-201ENST00000242776 SPINK9Q5DT21 86 aa10.32□□□□□ -0.76
DDX39A-201ENST00000242776 RBKSQ9H477 322 aa10.32□□□□□ -0.76
DDX39A-201ENST00000242776 LSM5Q9Y4Y9 91 aaKnown RBP10.32□□□□□ -0.76
DDX39A-201ENST00000242776 C2orf70A6NJV1 201 aa10.31□□□□□ -0.76
DDX39A-201ENST00000242776 CGB1A6NKQ9 187 aa10.31□□□□□ -0.76
DDX39A-201ENST00000242776 E7EUB6 86 aa10.31□□□□□ -0.76
DDX39A-201ENST00000242776 INS-IGF2F8WCM5 200 aa10.31□□□□□ -0.76
DDX39A-201ENST00000242776 CYB5BO43169 146 aa10.31□□□□□ -0.76
DDX39A-201ENST00000242776 SCAF4O95104 1147 aaKnown RBP10.31□□□□□ -0.76
DDX39A-201ENST00000242776 IGHV3-23P01764 117 aa10.31□□□□□ -0.76
DDX39A-201ENST00000242776 MBPP02686 304 aaPredicted RBP10.31□□□□□ -0.76
DDX39A-201ENST00000242776 RLN2P04090 185 aa10.31□□□□□ -0.76
DDX39A-201ENST00000242776 BCAP31P51572 246 aa10.31□□□□□ -0.76
DDX39A-201ENST00000242776 RAP2BP61225 183 aa10.31□□□□□ -0.76
DDX39A-201ENST00000242776 RPP30P78346 268 aaKnown RBP10.31□□□□□ -0.76
DDX39A-201ENST00000242776 ATP5G2Q06055 141 aa10.31□□□□□ -0.76
DDX39A-201ENST00000242776 FGL1Q08830 312 aa10.31□□□□□ -0.76
DDX39A-201ENST00000242776 SLC16A13Q7RTY0 426 aa10.31□□□□□ -0.76
DDX39A-201ENST00000242776 CHAC2Q8WUX2 184 aa10.31□□□□□ -0.76
DDX39A-201ENST00000242776 RAB40CQ96S21 281 aa10.31□□□□□ -0.76
DDX39A-201ENST00000242776 MAGT1Q9H0U3 335 aa10.31□□□□□ -0.76
DDX39A-201ENST00000242776 HEYLQ9NQ87 328 aaPredicted RBP10.31□□□□□ -0.76
DDX39A-201ENST00000242776 LOC102724200A0A096LPH7 203 aaPredicted RBP10.3□□□□□ -0.76
DDX39A-201ENST00000242776 IGLC7A0M8Q6 106 aa10.3□□□□□ -0.76
DDX39A-201ENST00000242776 NPIPB5A8MRT5 1133 aa10.3□□□□□ -0.76
DDX39A-201ENST00000242776 K7EPK0 472 aa10.3□□□□□ -0.76
DDX39A-201ENST00000242776 L7N2F9 121 aa10.3□□□□□ -0.76
DDX39A-201ENST00000242776 SSSCA1O60232 199 aa10.3□□□□□ -0.76
DDX39A-201ENST00000242776 OR2C1O95371 312 aa10.3□□□□□ -0.76
DDX39A-201ENST00000242776 OR13C7P0DN81 318 aa10.3□□□□□ -0.76
DDX39A-201ENST00000242776 SNCAP37840 140 aa10.3□□□□□ -0.76
DDX39A-201ENST00000242776 SUB1P53999 127 aaKnown RBP eCLIP10.3□□□□□ -0.76
DDX39A-201ENST00000242776 POLR2GP62487 172 aaKnown RBP eCLIP10.3□□□□□ -0.76
DDX39A-201ENST00000242776 VAMP2P63027 116 aa10.3□□□□□ -0.76
DDX39A-201ENST00000242776 RAB32Q13637 225 aa10.3□□□□□ -0.76
DDX39A-201ENST00000242776 TTC9CQ8N5M4 171 aa10.3□□□□□ -0.76
DDX39A-201ENST00000242776 OR10W1Q8NGF6 305 aa10.3□□□□□ -0.76
DDX39A-201ENST00000242776 OR1L6Q8NGR2 347 aa10.3□□□□□ -0.76
DDX39A-201ENST00000242776 PPP1R1CQ8WVI7 109 aa10.3□□□□□ -0.76
DDX39A-201ENST00000242776 RCL1Q9Y2P8 373 aaKnown RBP10.3□□□□□ -0.76
DDX39A-201ENST00000242776 KLK5Q9Y337 293 aaPredicted RBP10.3□□□□□ -0.76
DDX39A-201ENST00000242776 S4R3C0 116 aa10.3□□□□□ -0.76
DDX39A-201ENST00000242776 A0A1B0GVG6 124 aa10.3□□□□□ -0.76
DDX39A-201ENST00000242776 A0A1B0GW64 132 aa10.3□□□□□ -0.76
DDX39A-201ENST00000242776 OR2J3O76001 311 aa10.3□□□□□ -0.76
DDX39A-201ENST00000242776 IAPPP10997 89 aa10.3□□□□□ -0.76
DDX39A-201ENST00000242776 DEFA4P12838 97 aa10.3□□□□□ -0.76
DDX39A-201ENST00000242776 PSMB6P28072 239 aa10.3□□□□□ -0.76
DDX39A-201ENST00000242776 HTR2BP41595 481 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms