RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 ACTR3CQ9C0K3 210 aaPredicted RBP12.02□□□□□ -0.49
HDHD3-201ENST00000238379 SLC39A9Q9NUM3 307 aa12.02□□□□□ -0.49
HDHD3-201ENST00000238379 CTXND1A0A1B0GTU2 59 aa12.01□□□□□ -0.49
HDHD3-201ENST00000238379 TMEM218A2RU14 115 aa12.01□□□□□ -0.49
HDHD3-201ENST00000238379 SEC14L6B5MCN3 397 aa12.01□□□□□ -0.49
HDHD3-201ENST00000238379 CYB5BO43169 146 aa12.01□□□□□ -0.49
HDHD3-201ENST00000238379 EIF3GO75821 320 aaKnown RBP eCLIP12.01□□□□□ -0.49
HDHD3-201ENST00000238379 MT-CO2P00403 227 aa12.01□□□□□ -0.49
HDHD3-201ENST00000238379 FSHBP01225 129 aa12.01□□□□□ -0.49
HDHD3-201ENST00000238379 DEFA4P12838 97 aa12.01□□□□□ -0.49
HDHD3-201ENST00000238379 B2MP61769 119 aa12.01□□□□□ -0.49
HDHD3-201ENST00000238379 GUK1Q16774 197 aa12.01□□□□□ -0.49
HDHD3-201ENST00000238379 FAM122CQ6P4D5 195 aa12.01□□□□□ -0.49
HDHD3-201ENST00000238379 TTC9CQ8N5M4 171 aa12.01□□□□□ -0.49
HDHD3-201ENST00000238379 THAP8Q8NA92 274 aa12.01□□□□□ -0.49
HDHD3-201ENST00000238379 OR1L6Q8NGR2 347 aa12.01□□□□□ -0.49
HDHD3-201ENST00000238379 RAB24Q969Q5 203 aa12.01□□□□□ -0.49
HDHD3-201ENST00000238379 SLC25A22Q9H936 323 aa12.01□□□□□ -0.49
HDHD3-201ENST00000238379 MOB4Q9Y3A3 225 aa12.01□□□□□ -0.49
HDHD3-201ENST00000238379 HECTD1Q9ULT8 2610 aa12.01□□□□□ -0.49
HDHD3-201ENST00000238379 IGKV1D-37A0A075B6S9 117 aa12□□□□□ -0.49
HDHD3-201ENST00000238379 MAP1LC3B2A6NCE7 125 aa12□□□□□ -0.49
HDHD3-201ENST00000238379 C9JQL5 133 aa12□□□□□ -0.49
HDHD3-201ENST00000238379 H3BUX3 64 aa12□□□□□ -0.49
HDHD3-201ENST00000238379 I3L2K1 104 aa12□□□□□ -0.49
HDHD3-201ENST00000238379 AMY1AP04745 511 aa12□□□□□ -0.49
HDHD3-201ENST00000238379 RND2P52198 227 aa12□□□□□ -0.49
HDHD3-201ENST00000238379 FGF8P55075 233 aaPredicted RBP12□□□□□ -0.49
HDHD3-201ENST00000238379 CYB5R2Q6BCY4 276 aa12□□□□□ -0.49
HDHD3-201ENST00000238379 CIARTQ8N365 385 aaPredicted RBP12□□□□□ -0.49
HDHD3-201ENST00000238379 TMEM116Q8NCL8 245 aa12□□□□□ -0.49
HDHD3-201ENST00000238379 NARS2Q96I59 477 aaKnown RBP12□□□□□ -0.49
HDHD3-201ENST00000238379 MAP1LC3BQ9GZQ8 125 aa12□□□□□ -0.49
HDHD3-201ENST00000238379 TREM1Q9NP99 234 aa12□□□□□ -0.49
HDHD3-201ENST00000238379 TEX15Q9BXT5 2789 aa12□□□□□ -0.49
HDHD3-201ENST00000238379 NBPF19A0A087WUL8 3843 aa12□□□□□ -0.49
HDHD3-201ENST00000238379 A6NDX4 124 aa12□□□□□ -0.49
HDHD3-201ENST00000238379 BCL6BQ8N143 479 aaPredicted RBP12□□□□□ -0.49
HDHD3-201ENST00000238379 PBDC1Q9BVG4 233 aa12□□□□□ -0.49
HDHD3-201ENST00000238379 IGHV3-21A0A0B4J1V1 117 aa11.99□□□□□ -0.49
HDHD3-201ENST00000238379 SH2D7A6NKC9 451 aaPredicted RBP11.99□□□□□ -0.49
HDHD3-201ENST00000238379 K7EIM0 57 aa11.99□□□□□ -0.49
HDHD3-201ENST00000238379 HMGB3O15347 200 aaKnown RBP11.99□□□□□ -0.49
HDHD3-201ENST00000238379 GATA2P23769 480 aaPredicted RBP11.99□□□□□ -0.49
HDHD3-201ENST00000238379 CDC34P49427 236 aaPredicted RBP11.99□□□□□ -0.49
HDHD3-201ENST00000238379 CYP2G1PQ6ZSU1 146 aa11.99□□□□□ -0.49
HDHD3-201ENST00000238379 SGMS2Q8NHU3 365 aa11.99□□□□□ -0.49
HDHD3-201ENST00000238379 NANPQ8TBE9 248 aa11.99□□□□□ -0.49
HDHD3-201ENST00000238379 FANCD2OSQ96PS1 177 aa11.99□□□□□ -0.49
HDHD3-201ENST00000238379 FOXC2Q99958 501 aa11.99□□□□□ -0.49
HDHD3-201ENST00000238379 EIF5A2Q9GZV4 153 aaKnown RBP11.99□□□□□ -0.49
HDHD3-201ENST00000238379 IGLV11-55A0A075B6I3 123 aa11.98□□□□□ -0.49
HDHD3-201ENST00000238379 MDFIC2A0A1B0GVS7 189 aa11.98□□□□□ -0.49
HDHD3-201ENST00000238379 RBFOX3A6NFN3 312 aa11.98□□□□□ -0.49
HDHD3-201ENST00000238379 LINC01548A6NM66 108 aa11.98□□□□□ -0.49
HDHD3-201ENST00000238379 ATP6V0E1O15342 81 aa11.98□□□□□ -0.49
HDHD3-201ENST00000238379 TSPAN9O75954 239 aa11.98□□□□□ -0.49
HDHD3-201ENST00000238379 PEA15Q15121 130 aa11.98□□□□□ -0.49
HDHD3-201ENST00000238379 LY6EQ16553 131 aa11.98□□□□□ -0.49
HDHD3-201ENST00000238379 DEFB112Q30KQ8 113 aa11.98□□□□□ -0.49
HDHD3-201ENST00000238379 RARRES2Q99969 163 aa11.98□□□□□ -0.49
HDHD3-201ENST00000238379 A0A1W2PPV4 95 aa11.97□□□□□ -0.49
HDHD3-201ENST00000238379 TCRBV4S1A1TA0A5B7 111 aa11.97□□□□□ -0.49
HDHD3-201ENST00000238379 ZFP92A6NM28 416 aa11.97□□□□□ -0.49
HDHD3-201ENST00000238379 ADCYAP1P18509 176 aa11.97□□□□□ -0.49
HDHD3-201ENST00000238379 ZNF90Q03938 601 aa11.97□□□□□ -0.49
HDHD3-201ENST00000238379 HAGHQ16775 308 aa11.97□□□□□ -0.49
HDHD3-201ENST00000238379 C22orf15Q8WYQ4 148 aa11.97□□□□□ -0.49
HDHD3-201ENST00000238379 CSMD1Q96PZ7 3565 aa11.97□□□□□ -0.49
HDHD3-201ENST00000238379 PMS2P11Q13670 270 aa11.97□□□□□ -0.49
HDHD3-201ENST00000238379 C9orf139Q6ZV77 190 aa11.97□□□□□ -0.49
HDHD3-201ENST00000238379 OR5T1Q8NG75 326 aa11.97□□□□□ -0.49
HDHD3-201ENST00000238379 TRGV9Q99603 122 aa11.97□□□□□ -0.49
HDHD3-201ENST00000238379 SEPSECSQ9HD40 501 aaKnown RBP11.97□□□□□ -0.49
HDHD3-201ENST00000238379 TNFRSF19Q9NS68 423 aa11.97□□□□□ -0.49
HDHD3-201ENST00000238379 GNG13Q9P2W3 67 aa11.97□□□□□ -0.49
HDHD3-201ENST00000238379 PITPNC1Q9UKF7 332 aa11.97□□□□□ -0.49
HDHD3-201ENST00000238379 SELENOTP62341 195 aa11.96□□□□□ -0.49
HDHD3-201ENST00000238379 C10orf91Q5T1B1 145 aa11.96□□□□□ -0.49
HDHD3-201ENST00000238379 OR4X1Q8NH49 305 aa11.96□□□□□ -0.49
HDHD3-201ENST00000238379 TMUB1Q9BVT8 246 aa11.96□□□□□ -0.49
HDHD3-201ENST00000238379 FLNAP21333 2647 aaKnown RBP11.96□□□□□ -0.5
HDHD3-201ENST00000238379 SFTA3P0C7M3 94 aa11.95□□□□□ -0.5
HDHD3-201ENST00000238379 ICAM4Q14773 271 aa11.95□□□□□ -0.5
HDHD3-201ENST00000238379 ZNF506Q5JVG8 444 aa11.95□□□□□ -0.5
HDHD3-201ENST00000238379 UNQ5815/PRO19632Q6UWF5 114 aa11.95□□□□□ -0.5
HDHD3-201ENST00000238379 FAM110DQ8TAY7 271 aaPredicted RBP11.95□□□□□ -0.5
HDHD3-201ENST00000238379 TMPRSS5Q9H3S3 457 aa11.95□□□□□ -0.5
HDHD3-201ENST00000238379 SMDT1Q9H4I9 107 aa11.95□□□□□ -0.5
HDHD3-201ENST00000238379 LOC102723971A0A1B0GUV8 181 aa11.95□□□□□ -0.5
HDHD3-201ENST00000238379 PSMB11A5LHX3 300 aa11.95□□□□□ -0.5
HDHD3-201ENST00000238379 M0QZK8 103 aa11.95□□□□□ -0.5
HDHD3-201ENST00000238379 IGLC1P0CG04 106 aa11.95□□□□□ -0.5
HDHD3-201ENST00000238379 PPT1P50897 306 aa11.95□□□□□ -0.5
HDHD3-201ENST00000238379 RHOBP62745 196 aa11.95□□□□□ -0.5
HDHD3-201ENST00000238379 ECSCRQ19T08 205 aa11.95□□□□□ -0.5
HDHD3-201ENST00000238379 KLK9Q2XQG4 91 aa11.95□□□□□ -0.5
HDHD3-201ENST00000238379 AKIRIN2Q53H80 203 aa11.95□□□□□ -0.5
HDHD3-201ENST00000238379 SPATA31B1PQ5VZV4 182 aa11.95□□□□□ -0.5
HDHD3-201ENST00000238379 TMEM68Q96MH6 324 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms