RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 FAM166AQ6J272 317 aa6.91□□□□□ -1.3
APOB-201ENST00000233242 TMEM238C9JI98 176 aa6.91□□□□□ -1.3
APOB-201ENST00000233242 MOSP00540 346 aa6.91□□□□□ -1.3
APOB-201ENST00000233242 MAJINQ3KP22 176 aa6.91□□□□□ -1.3
APOB-201ENST00000233242 LINC01565O15544 149 aa6.91□□□□□ -1.3
APOB-201ENST00000233242 RNASE1P07998 156 aaKnown RBP6.91□□□□□ -1.3
APOB-201ENST00000233242 OR9G9P0C7N8 305 aa6.91□□□□□ -1.3
APOB-201ENST00000233242 TMEM95Q3KNT9 176 aa6.91□□□□□ -1.3
APOB-201ENST00000233242 C15orf61A6NNL5 157 aa6.91□□□□□ -1.3
APOB-201ENST00000233242 VKORC1Q9BQB6 163 aa6.91□□□□□ -1.3
APOB-201ENST00000233242 A0A1W2PQF6 199 aa6.91□□□□□ -1.3
APOB-201ENST00000233242 CCL8P80075 99 aa6.91□□□□□ -1.3
APOB-201ENST00000233242 RPL39P5Q59GN2 51 aa6.91□□□□□ -1.3
APOB-201ENST00000233242 LDLRAD4O15165 306 aa6.91□□□□□ -1.3
APOB-201ENST00000233242 SSBP2P81877 361 aaPredicted RBP6.91□□□□□ -1.3
APOB-201ENST00000233242 SLC50A1Q9BRV3 221 aa6.91□□□□□ -1.3
APOB-201ENST00000233242 SEMA5BQ9P283 1151 aa6.91□□□□□ -1.3
APOB-201ENST00000233242 FABP5P3A8MUU1 101 aa6.91□□□□□ -1.3
APOB-201ENST00000233242 OVOL2Q9BRP0 275 aa6.91□□□□□ -1.3
APOB-201ENST00000233242 TNFRSF18Q9Y5U5 241 aa6.91□□□□□ -1.3
APOB-201ENST00000233242 FAM90A27PA6NNH2 459 aa6.91□□□□□ -1.3
APOB-201ENST00000233242 Q0VG73 95 aa6.91□□□□□ -1.3
APOB-201ENST00000233242 FAM74A4Q5TZK3 123 aa6.91□□□□□ -1.3
APOB-201ENST00000233242 TMEM101Q96IK0 257 aa6.9□□□□□ -1.3
APOB-201ENST00000233242 SRXN1Q9BYN0 137 aa6.9□□□□□ -1.3
APOB-201ENST00000233242 NEUROG3Q9Y4Z2 214 aa6.9□□□□□ -1.3
APOB-201ENST00000233242 EFNB3Q15768 340 aa6.9□□□□□ -1.3
APOB-201ENST00000233242 RPRMLQ8N4K4 120 aa6.9□□□□□ -1.3
APOB-201ENST00000233242 YPEL1O60688 119 aa6.9□□□□□ -1.3
APOB-201ENST00000233242 YPEL2Q96QA6 119 aa6.9□□□□□ -1.3
APOB-201ENST00000233242 YLPM1P49750 1951 aaKnown RBP6.9□□□□□ -1.3
APOB-201ENST00000233242 CGB1A6NKQ9 187 aa6.9□□□□□ -1.3
APOB-201ENST00000233242 GFI1Q99684 422 aa6.9□□□□□ -1.3
APOB-201ENST00000233242 ZNF815PA8K554 130 aa6.9□□□□□ -1.3
APOB-201ENST00000233242 C21orf62Q9NYP8 219 aa6.9□□□□□ -1.3
APOB-201ENST00000233242 ERG28Q9UKR5 140 aa6.9□□□□□ -1.3
APOB-201ENST00000233242 MYLKQ15746 1914 aa6.9□□□□□ -1.3
APOB-201ENST00000233242 SYS1-DBNDD2H3BUS1 97 aa6.9□□□□□ -1.31
APOB-201ENST00000233242 KLK10O43240 276 aa6.9□□□□□ -1.31
APOB-201ENST00000233242 CFPP27918 469 aa6.9□□□□□ -1.31
APOB-201ENST00000233242 RPP25Q9BUL9 199 aaKnown RBP6.9□□□□□ -1.31
APOB-201ENST00000233242 H3BTX0 84 aa6.9□□□□□ -1.31
APOB-201ENST00000233242 C1orf162Q8NEQ5 155 aaPredicted RBP6.9□□□□□ -1.31
APOB-201ENST00000233242 TMEM74BQ9NUR3 256 aa6.9□□□□□ -1.31
APOB-201ENST00000233242 KIR3DL3Q8N743 410 aa6.9□□□□□ -1.31
APOB-201ENST00000233242 TRBV7-9A0A0J9YWB2 115 aa6.9□□□□□ -1.31
APOB-201ENST00000233242 BCL6BQ8N143 479 aaPredicted RBP6.9□□□□□ -1.31
APOB-201ENST00000233242 LOXL4Q96JB6 756 aa6.9□□□□□ -1.31
APOB-201ENST00000233242 A0A1W2PRD5 423 aa6.9□□□□□ -1.31
APOB-201ENST00000233242 A0A1W2PRF3 423 aa6.9□□□□□ -1.31
APOB-201ENST00000233242 A0A1W2PRM7 423 aa6.9□□□□□ -1.31
APOB-201ENST00000233242 GUSBP1Q15486 140 aa6.9□□□□□ -1.31
APOB-201ENST00000233242 GTSF1LQ9H1H1 148 aa6.9□□□□□ -1.31
APOB-201ENST00000233242 IGHV3-72A0A0B4J1Y9 119 aa6.89□□□□□ -1.31
APOB-201ENST00000233242 NMSQ5H8A3 153 aa6.89□□□□□ -1.31
APOB-201ENST00000233242 ZNF497Q6ZNH5 498 aa6.89□□□□□ -1.31
APOB-201ENST00000233242 LTBP4Q8N2S1 1624 aa6.89□□□□□ -1.31
APOB-201ENST00000233242 CCL4P13236 92 aa6.89□□□□□ -1.31
APOB-201ENST00000233242 IFI27P40305 119 aaPredicted RBP6.89□□□□□ -1.31
APOB-201ENST00000233242 LAGE3Q14657 143 aa6.89□□□□□ -1.31
APOB-201ENST00000233242 TCRBV4S1A1TA0A5B7 111 aa6.89□□□□□ -1.31
APOB-201ENST00000233242 SUPT4H1P63272 117 aaKnown RBP6.89□□□□□ -1.31
APOB-201ENST00000233242 KIR3DS1Q14943 382 aa6.89□□□□□ -1.31
APOB-201ENST00000233242 NHSL1Q5SYE7 1610 aa6.89□□□□□ -1.31
APOB-201ENST00000233242 IGKV3D-11A0A0A0MRZ8 115 aa6.89□□□□□ -1.31
APOB-201ENST00000233242 SRSF6Q13247 344 aaKnown RBP6.89□□□□□ -1.31
APOB-201ENST00000233242 RTN4RL2Q86UN3 420 aa6.89□□□□□ -1.31
APOB-201ENST00000233242 WFDC3Q8IUB2 231 aa6.89□□□□□ -1.31
APOB-201ENST00000233242 C10orf91Q5T1B1 145 aa6.89□□□□□ -1.31
APOB-201ENST00000233242 CHTOPQ9Y3Y2 248 aaKnown RBP6.89□□□□□ -1.31
APOB-201ENST00000233242 TRAV5A0A0B4J249 113 aa6.89□□□□□ -1.31
APOB-201ENST00000233242 Q6ZT83 130 aa6.89□□□□□ -1.31
APOB-201ENST00000233242 UPK2O00526 184 aa6.89□□□□□ -1.31
APOB-201ENST00000233242 SPINK8P0C7L1 97 aa6.89□□□□□ -1.31
APOB-201ENST00000233242 PAQR4Q8N4S7 273 aaPredicted RBP6.89□□□□□ -1.31
APOB-201ENST00000233242 CST9LQ9H4G1 147 aa6.89□□□□□ -1.31
APOB-201ENST00000233242 SLC25A15Q9Y619 301 aa6.89□□□□□ -1.31
APOB-201ENST00000233242 M0R381 172 aa6.89□□□□□ -1.31
APOB-201ENST00000233242 LINC00312Q9Y6C7 94 aa6.88□□□□□ -1.31
APOB-201ENST00000233242 TAF1LQ8IZX4 1826 aa6.88□□□□□ -1.31
APOB-201ENST00000233242 IGKV3-7A0A075B6H7 116 aa6.88□□□□□ -1.31
APOB-201ENST00000233242 REG1AP05451 166 aa6.88□□□□□ -1.31
APOB-201ENST00000233242 C3orf79P0CE67 100 aa6.88□□□□□ -1.31
APOB-201ENST00000233242 TRIP6Q15654 476 aaKnown RBP6.88□□□□□ -1.31
APOB-201ENST00000233242 MPV17L2Q567V2 206 aa6.88□□□□□ -1.31
APOB-201ENST00000233242 EREGO14944 169 aa6.88□□□□□ -1.31
APOB-201ENST00000233242 LYPD3O95274 346 aa6.88□□□□□ -1.31
APOB-201ENST00000233242 CT83Q5H943 113 aa6.88□□□□□ -1.31
APOB-201ENST00000233242 TMEM14EPQ6UXP3 125 aa6.88□□□□□ -1.31
APOB-201ENST00000233242 PPIAL4CA0A0B4J2A2 164 aa6.88□□□□□ -1.31
APOB-201ENST00000233242 PPIAL4GP0DN37 164 aa6.88□□□□□ -1.31
APOB-201ENST00000233242 CD69Q07108 199 aa6.88□□□□□ -1.31
APOB-201ENST00000233242 FAM90A2PQ658T7 463 aa6.88□□□□□ -1.31
APOB-201ENST00000233242 PTPRDP23468 1912 aa6.88□□□□□ -1.31
APOB-201ENST00000233242 IGKV1D-13A0A0B4J2D9 117 aa6.88□□□□□ -1.31
APOB-201ENST00000233242 M0R2P5 195 aa6.88□□□□□ -1.31
APOB-201ENST00000233242 IGHV2-5P01817 119 aa6.88□□□□□ -1.31
APOB-201ENST00000233242 IGKV1-13P0DP09 117 aa6.88□□□□□ -1.31
APOB-201ENST00000233242 PSG1P11464 419 aa6.88□□□□□ -1.31
APOB-201ENST00000233242 MORN3Q6PF18 240 aaPredicted RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms