RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 CXCL2P19875 107 aa5.15□□□□□ -1.59
VPS13D-201ENST00000011700 GLCCI1Q86VQ1 547 aa5.15□□□□□ -1.59
VPS13D-201ENST00000011700 CCL4L1Q8NHW4 92 aa5.15□□□□□ -1.59
VPS13D-201ENST00000011700 TCRBV4S1A1TA0A5B7 111 aa5.15□□□□□ -1.59
VPS13D-201ENST00000011700 FAM157AC9JC47 383 aa5.15□□□□□ -1.59
VPS13D-201ENST00000011700 F8W1H4 67 aa5.15□□□□□ -1.59
VPS13D-201ENST00000011700 MINOS1Q5TGZ0 78 aa5.15□□□□□ -1.59
VPS13D-201ENST00000011700 RPRMLQ8N4K4 120 aa5.15□□□□□ -1.59
VPS13D-201ENST00000011700 ZNF784Q8NCA9 323 aaPredicted RBP5.15□□□□□ -1.59
VPS13D-201ENST00000011700 KLF14Q8TD94 323 aaPredicted RBP5.15□□□□□ -1.59
VPS13D-201ENST00000011700 LINC00477Q96M19 166 aa5.15□□□□□ -1.59
VPS13D-201ENST00000011700 MINOS1-NBL1R4GNA1 71 aa5.15□□□□□ -1.59
VPS13D-201ENST00000011700 ZNF362Q5T0B9 420 aaPredicted RBP5.14□□□□□ -1.59
VPS13D-201ENST00000011700 PRADC1Q9BSG0 188 aa5.14□□□□□ -1.59
VPS13D-201ENST00000011700 SSTR5P35346 364 aa5.14□□□□□ -1.59
VPS13D-201ENST00000011700 WNT5AP41221 380 aa5.14□□□□□ -1.59
VPS13D-201ENST00000011700 PSG4Q00888 419 aa5.14□□□□□ -1.59
VPS13D-201ENST00000011700 ABHD12Q8N2K0 398 aa5.14□□□□□ -1.59
VPS13D-201ENST00000011700 ERG28Q9UKR5 140 aa5.14□□□□□ -1.59
VPS13D-201ENST00000011700 FAM90A27PA6NNH2 459 aa5.14□□□□□ -1.59
VPS13D-201ENST00000011700 PRR32B1ATL7 298 aa5.14□□□□□ -1.59
VPS13D-201ENST00000011700 MMP23AO75900 390 aa5.14□□□□□ -1.59
VPS13D-201ENST00000011700 IGKCP01834 107 aa5.14□□□□□ -1.59
VPS13D-201ENST00000011700 ACYP1P07311 99 aa5.14□□□□□ -1.59
VPS13D-201ENST00000011700 PDCD1Q15116 288 aa5.14□□□□□ -1.59
VPS13D-201ENST00000011700 SAMD5Q5TGI4 173 aa5.14□□□□□ -1.59
VPS13D-201ENST00000011700 ANKRD17O75179 2603 aaKnown RBP5.14□□□□□ -1.59
VPS13D-201ENST00000011700 TNFRSF6BO95407 300 aa5.14□□□□□ -1.59
VPS13D-201ENST00000011700 ZNF137PP52743 207 aa5.14□□□□□ -1.59
VPS13D-201ENST00000011700 H2BFSP57053 126 aa5.14□□□□□ -1.59
VPS13D-201ENST00000011700 F8VVB4 439 aa5.14□□□□□ -1.59
VPS13D-201ENST00000011700 F8VWA3 439 aa5.14□□□□□ -1.59
VPS13D-201ENST00000011700 EFEMP2O95967 443 aa5.14□□□□□ -1.59
VPS13D-201ENST00000011700 C8orf46Q8TAG6 207 aa5.14□□□□□ -1.59
VPS13D-201ENST00000011700 PRR7Q8TB68 274 aa5.14□□□□□ -1.59
VPS13D-201ENST00000011700 IL18BPO95998 194 aa5.14□□□□□ -1.59
VPS13D-201ENST00000011700 HTN1P15515 57 aa5.14□□□□□ -1.59
VPS13D-201ENST00000011700 ZNF562Q6V9R5 426 aa5.14□□□□□ -1.59
VPS13D-201ENST00000011700 ACP7Q6ZNF0 438 aa5.14□□□□□ -1.59
VPS13D-201ENST00000011700 SMIM20Q8N5G0 67 aa5.14□□□□□ -1.59
VPS13D-201ENST00000011700 TNFRSF12AQ9NP84 129 aa5.14□□□□□ -1.59
VPS13D-201ENST00000011700 RHODO00212 210 aa5.14□□□□□ -1.59
VPS13D-201ENST00000011700 PLAUP00749 431 aa5.14□□□□□ -1.59
VPS13D-201ENST00000011700 RPS27P42677 84 aaKnown RBP5.14□□□□□ -1.59
VPS13D-201ENST00000011700 IFI27L2Q9H2X8 130 aa5.14□□□□□ -1.59
VPS13D-201ENST00000011700 GSN-AS1Q9NRJ2 163 aa5.14□□□□□ -1.59
VPS13D-201ENST00000011700 LHFPL6Q9Y693 200 aa5.14□□□□□ -1.59
VPS13D-201ENST00000011700 ACANP16112 2415 aa5.14□□□□□ -1.59
VPS13D-201ENST00000011700 NDUFB8O95169 186 aa5.14□□□□□ -1.59
VPS13D-201ENST00000011700 APOHP02749 345 aaPredicted RBP5.14□□□□□ -1.59
VPS13D-201ENST00000011700 CRYBB3P26998 211 aa5.14□□□□□ -1.59
VPS13D-201ENST00000011700 GZMMP51124 257 aa5.14□□□□□ -1.59
VPS13D-201ENST00000011700 IGLV3-21P80748 117 aaPredicted RBP5.14□□□□□ -1.59
VPS13D-201ENST00000011700 SSBP3Q9BWW4 388 aaPredicted RBP5.14□□□□□ -1.59
VPS13D-201ENST00000011700 IGHV3-43A0A0B4J1X8 118 aa5.13□□□□□ -1.59
VPS13D-201ENST00000011700 THY1P04216 161 aa5.13□□□□□ -1.59
VPS13D-201ENST00000011700 IGHV3-43DP0DP04 118 aa5.13□□□□□ -1.59
VPS13D-201ENST00000011700 CTAG1AP78358 180 aa5.13□□□□□ -1.59
VPS13D-201ENST00000011700 C19orf48Q6RUI8 117 aa5.13□□□□□ -1.59
VPS13D-201ENST00000011700 Q6ZS49 121 aa5.13□□□□□ -1.59
VPS13D-201ENST00000011700 JPT2Q9H910 190 aa5.13□□□□□ -1.59
VPS13D-201ENST00000011700 C9orf172C9J069 976 aa5.13□□□□□ -1.59
VPS13D-201ENST00000011700 NBR2O15453 112 aa5.13□□□□□ -1.59
VPS13D-201ENST00000011700 UPK3AO75631 287 aa5.13□□□□□ -1.59
VPS13D-201ENST00000011700 UNC119Q13432 240 aa5.13□□□□□ -1.59
VPS13D-201ENST00000011700 TEX45Q8NA69 505 aa5.13□□□□□ -1.59
VPS13D-201ENST00000011700 DPH3Q96FX2 82 aa5.13□□□□□ -1.59
VPS13D-201ENST00000011700 PILRBQ9UKJ0 227 aa5.13□□□□□ -1.59
VPS13D-201ENST00000011700 TRAV8-6A0A0B4J262 113 aa5.13□□□□□ -1.59
VPS13D-201ENST00000011700 ZP1P60852 638 aa5.13□□□□□ -1.59
VPS13D-201ENST00000011700 SLC25A53Q5H9E4 307 aa5.13□□□□□ -1.59
VPS13D-201ENST00000011700 ZNF501Q96CX3 271 aaPredicted RBP5.13□□□□□ -1.59
VPS13D-201ENST00000011700 A0A1W2PPV9 198 aa5.13□□□□□ -1.59
VPS13D-201ENST00000011700 MIC13Q5XKP0 118 aa5.13□□□□□ -1.59
VPS13D-201ENST00000011700 LHFPL4Q7Z7J7 247 aa5.13□□□□□ -1.59
VPS13D-201ENST00000011700 SETD2Q9BYW2 2564 aaPredicted RBP5.13□□□□□ -1.59
VPS13D-201ENST00000011700 RNASE1P07998 156 aaKnown RBP5.13□□□□□ -1.59
VPS13D-201ENST00000011700 CCL1P22362 96 aa5.13□□□□□ -1.59
VPS13D-201ENST00000011700 FXYD3Q14802 87 aa5.13□□□□□ -1.59
VPS13D-201ENST00000011700 FOXA2Q9Y261 457 aaPredicted RBP5.13□□□□□ -1.59
VPS13D-201ENST00000011700 ITGB1BP1O14713 200 aa5.13□□□□□ -1.59
VPS13D-201ENST00000011700 TNFSF13O75888 250 aa5.13□□□□□ -1.59
VPS13D-201ENST00000011700 IGFBP3P17936 291 aaPredicted RBP5.13□□□□□ -1.59
VPS13D-201ENST00000011700 NANOS3P60323 173 aaKnown RBP5.13□□□□□ -1.59
VPS13D-201ENST00000011700 TRGV9Q99603 122 aa5.13□□□□□ -1.59
VPS13D-201ENST00000011700 VCYO14598 125 aa5.13□□□□□ -1.59
VPS13D-201ENST00000011700 CFPP27918 469 aa5.13□□□□□ -1.59
VPS13D-201ENST00000011700 TMEM258P61165 79 aa5.13□□□□□ -1.59
VPS13D-201ENST00000011700 UTF1Q5T230 341 aa5.13□□□□□ -1.59
VPS13D-201ENST00000011700 FAM90A2PQ658T7 463 aa5.13□□□□□ -1.59
VPS13D-201ENST00000011700 IGLV1-36A0A0B4J1U3 117 aa5.13□□□□□ -1.59
VPS13D-201ENST00000011700 REPIN1Q9BWE0 567 aaKnown RBP5.13□□□□□ -1.59
VPS13D-201ENST00000011700 IGLV3-32A0A0A0MS00 114 aa5.13□□□□□ -1.59
VPS13D-201ENST00000011700 RNF152Q8N8N0 203 aa5.13□□□□□ -1.59
VPS13D-201ENST00000011700 DUX3Q96PT4 197 aa5.13□□□□□ -1.59
VPS13D-201ENST00000011700 CST9LQ9H4G1 147 aa5.13□□□□□ -1.59
VPS13D-201ENST00000011700 COL5A1P20908 1838 aaPredicted RBP5.12□□□□□ -1.59
VPS13D-201ENST00000011700 A0A0U1RQS6 177 aa5.12□□□□□ -1.59
VPS13D-201ENST00000011700 FAM223BA6NKX1 122 aa5.12□□□□□ -1.59
VPS13D-201ENST00000011700 CBLN1P23435 193 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms