RNA–Protein interactions for RNA: ENSMUST00000160369.7

Ercc1-203, Transcript of DNA excision repair protein ERCC-1, mousemouse

TSL 1 (best) BASIC

Gene Ercc1, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-203ENSMUST00000160369 PlpbpQ9Z2Y8 274 aa11.16□□□□□ -0.62
Ercc1-203ENSMUST00000160369 Nsd1O88491 2588 aaKnown RBP11.16□□□□□ -0.62
Ercc1-203ENSMUST00000160369 BsnO88737 3942 aa11.15□□□□□ -0.62
Ercc1-203ENSMUST00000160369 Olfr1458A0A1L1SSD5 307 aa11.15□□□□□ -0.62
Ercc1-203ENSMUST00000160369 Gm44501A8R0T9 150 aa11.15□□□□□ -0.62
Ercc1-203ENSMUST00000160369 Olfr243E9PV96 316 aa11.15□□□□□ -0.62
Ercc1-203ENSMUST00000160369 JtbO88824 146 aa11.15□□□□□ -0.62
Ercc1-203ENSMUST00000160369 B4galt1P15535 399 aa11.15□□□□□ -0.62
Ercc1-203ENSMUST00000160369 OsmP53347 263 aa11.15□□□□□ -0.62
Ercc1-203ENSMUST00000160369 Rab3cP62823 227 aa11.15□□□□□ -0.62
Ercc1-203ENSMUST00000160369 Uba52P62984 128 aa11.15□□□□□ -0.62
Ercc1-203ENSMUST00000160369 Kat7Q5SVQ0 613 aaKnown RBP11.15□□□□□ -0.62
Ercc1-203ENSMUST00000160369 Olfr1000Q7TR99 314 aa11.15□□□□□ -0.62
Ercc1-203ENSMUST00000160369 Gm17334Q8C6U3 126 aa11.15□□□□□ -0.62
Ercc1-203ENSMUST00000160369 Vmn1r36Q8R2E3 305 aa11.15□□□□□ -0.62
Ercc1-203ENSMUST00000160369 St3gal6Q8VIB3 329 aa11.15□□□□□ -0.62
Ercc1-203ENSMUST00000160369 FrkQ922K9 512 aa11.15□□□□□ -0.62
Ercc1-203ENSMUST00000160369 H2afb1Q9CQ70 111 aa11.15□□□□□ -0.62
Ercc1-203ENSMUST00000160369 ManfQ9CXI5 179 aaKnown RBP11.15□□□□□ -0.62
Ercc1-203ENSMUST00000160369 Rpl15Q9CZM2 204 aaKnown RBP11.15□□□□□ -0.62
Ercc1-203ENSMUST00000160369 Iqcf5Q9DAL7 148 aa11.15□□□□□ -0.62
Ercc1-203ENSMUST00000160369 Vmn1r48Q9EQ52 302 aa11.15□□□□□ -0.62
Ercc1-203ENSMUST00000160369 Herpud1Q9JJK5 391 aa11.15□□□□□ -0.62
Ercc1-203ENSMUST00000160369 Sh2d2aQ9QXK9 374 aa11.15□□□□□ -0.62
Ercc1-203ENSMUST00000160369 Pla2g2dQ9WVF6 144 aa11.15□□□□□ -0.62
Ercc1-203ENSMUST00000160369 Cx3cr1Q9Z0D9 354 aa11.15□□□□□ -0.62
Ercc1-203ENSMUST00000160369 Fn1P11276 2477 aaKnown RBP11.15□□□□□ -0.62
Ercc1-203ENSMUST00000160369 Fbn1Q61554 2873 aaKnown RBP11.14□□□□□ -0.63
Ercc1-203ENSMUST00000160369 Trbv23A0A0A6YWQ1 115 aa11.14□□□□□ -0.63
Ercc1-203ENSMUST00000160369 Tomm5B1AXP6 51 aa11.14□□□□□ -0.63
Ercc1-203ENSMUST00000160369 Olfr427E9Q7E7 315 aa11.14□□□□□ -0.63
Ercc1-203ENSMUST00000160369 Gm20767O70517 169 aa11.14□□□□□ -0.63
Ercc1-203ENSMUST00000160369 Ccl2P10148 148 aa11.14□□□□□ -0.63
Ercc1-203ENSMUST00000160369 Fitm2P59266 262 aa11.14□□□□□ -0.63
Ercc1-203ENSMUST00000160369 Ucp2P70406 309 aa11.14□□□□□ -0.63
Ercc1-203ENSMUST00000160369 Defb30Q30KN4 75 aa11.14□□□□□ -0.63
Ercc1-203ENSMUST00000160369 Gm4792Q569Q2 183 aa11.14□□□□□ -0.63
Ercc1-203ENSMUST00000160369 Lin54Q571G4 749 aa11.14□□□□□ -0.63
Ercc1-203ENSMUST00000160369 Dyrk1aQ61214 763 aa11.14□□□□□ -0.63
Ercc1-203ENSMUST00000160369 Slc25a47Q6IS41 310 aa11.14□□□□□ -0.63
Ercc1-203ENSMUST00000160369 Dtx3Q80V91 347 aa11.14□□□□□ -0.63
Ercc1-203ENSMUST00000160369 Cd200r5Q8BTP3 270 aa11.14□□□□□ -0.63
Ercc1-203ENSMUST00000160369 Olfr1501Q8VFQ3 315 aa11.14□□□□□ -0.63
Ercc1-203ENSMUST00000160369 Ccdc107Q9DCC3 242 aa11.14□□□□□ -0.63
Ercc1-203ENSMUST00000160369 Znf22Q9ERU3 237 aa11.14□□□□□ -0.63
Ercc1-203ENSMUST00000160369 PbkQ9JJ78 330 aa11.14□□□□□ -0.63
Ercc1-203ENSMUST00000160369 Opn3Q9WUK7 400 aa11.14□□□□□ -0.63
Ercc1-203ENSMUST00000160369 Trbv29A0A0G2LB96 114 aa11.13□□□□□ -0.63
Ercc1-203ENSMUST00000160369 Olfr1192-ps1A0A1L1SRD7 309 aa11.13□□□□□ -0.63
Ercc1-203ENSMUST00000160369 Olfr571E9Q407 322 aa11.13□□□□□ -0.63
Ercc1-203ENSMUST00000160369 Gm21818J3KMS6 170 aa11.13□□□□□ -0.63
Ercc1-203ENSMUST00000160369 Ca11O70354 328 aa11.13□□□□□ -0.63
Ercc1-203ENSMUST00000160369 H2-Ab1P01921 265 aa11.13□□□□□ -0.63
Ercc1-203ENSMUST00000160369 RrasP10833 218 aa11.13□□□□□ -0.63
Ercc1-203ENSMUST00000160369 Tcte3P11985 191 aa11.13□□□□□ -0.63
Ercc1-203ENSMUST00000160369 Crisp2P16563 243 aa11.13□□□□□ -0.63
Ercc1-203ENSMUST00000160369 KrasP32883 189 aa11.13□□□□□ -0.63
Ercc1-203ENSMUST00000160369 Tspan5P62080 268 aa11.13□□□□□ -0.63
Ercc1-203ENSMUST00000160369 Fabp5Q05816 135 aaKnown RBP11.13□□□□□ -0.63
Ercc1-203ENSMUST00000160369 Shisa3Q3UPR0 238 aa11.13□□□□□ -0.63
Ercc1-203ENSMUST00000160369 Olfr147Q60886 317 aa11.13□□□□□ -0.63
Ercc1-203ENSMUST00000160369 Olfr876Q7TRE4 310 aa11.13□□□□□ -0.63
Ercc1-203ENSMUST00000160369 Galnt14Q8BVG5 550 aa11.13□□□□□ -0.63
Ercc1-203ENSMUST00000160369 Actrt3Q8BXF8 369 aa11.13□□□□□ -0.63
Ercc1-203ENSMUST00000160369 D630044L22RikQ8C701 164 aa11.13□□□□□ -0.63
Ercc1-203ENSMUST00000160369 Agpat2Q8K3K7 278 aa11.13□□□□□ -0.63
Ercc1-203ENSMUST00000160369 Olfr129Q8VEY1 330 aa11.13□□□□□ -0.63
Ercc1-203ENSMUST00000160369 Pbp2Q8VIN1 187 aa11.13□□□□□ -0.63
Ercc1-203ENSMUST00000160369 GhitmQ91VC9 346 aa11.13□□□□□ -0.63
Ercc1-203ENSMUST00000160369 Mrps14Q9CR88 128 aa11.13□□□□□ -0.63
Ercc1-203ENSMUST00000160369 Myoz1Q9JK37 296 aa11.13□□□□□ -0.63
Ercc1-203ENSMUST00000160369 LitafQ9JLJ0 161 aa11.13□□□□□ -0.63
Ercc1-203ENSMUST00000160369 GlrxQ9QUH0 107 aa11.13□□□□□ -0.63
Ercc1-203ENSMUST00000160369 Timm23Q9WTQ8 209 aa11.13□□□□□ -0.63
Ercc1-203ENSMUST00000160369 Hnf4gQ9WUU6 408 aa11.13□□□□□ -0.63
Ercc1-203ENSMUST00000160369 PkdrejQ9Z0T6 2126 aa11.13□□□□□ -0.63
Ercc1-203ENSMUST00000160369 Creb3l1Q9Z125 519 aa11.13□□□□□ -0.63
Ercc1-203ENSMUST00000160369 Mbd2Q9Z2E1 414 aa11.13□□□□□ -0.63
Ercc1-203ENSMUST00000160369 Rpl7a-ps5A0A140T8L3 268 aa11.12□□□□□ -0.63
Ercc1-203ENSMUST00000160369 Tmem156A0A1D5RLR8 321 aa11.12□□□□□ -0.63
Ercc1-203ENSMUST00000160369 Vmn2r83E9Q0G7 864 aa11.12□□□□□ -0.63
Ercc1-203ENSMUST00000160369 Vmn2r80E9Q1L0 863 aa11.12□□□□□ -0.63
Ercc1-203ENSMUST00000160369 Gm3250E9Q1M3 230 aa11.12□□□□□ -0.63
Ercc1-203ENSMUST00000160369 Ifna1P01572 189 aa11.12□□□□□ -0.63
Ercc1-203ENSMUST00000160369 CapgP24452 352 aaKnown RBP11.12□□□□□ -0.63
Ercc1-203ENSMUST00000160369 Slc6a9P28571 692 aa11.12□□□□□ -0.63
Ercc1-203ENSMUST00000160369 S100a9P31725 113 aa11.12□□□□□ -0.63
Ercc1-203ENSMUST00000160369 Hes1P35428 282 aa11.12□□□□□ -0.63
Ercc1-203ENSMUST00000160369 Cks2P56390 79 aa11.12□□□□□ -0.63
Ercc1-203ENSMUST00000160369 Pax6P63015 422 aa11.12□□□□□ -0.63
Ercc1-203ENSMUST00000160369 CluQ06890 448 aa11.12□□□□□ -0.63
Ercc1-203ENSMUST00000160369 Vmn1r15Q14C10 299 aa11.12□□□□□ -0.63
Ercc1-203ENSMUST00000160369 Mfsd4b3Q3UN21 355 aa11.12□□□□□ -0.63
Ercc1-203ENSMUST00000160369 Ms4a13Q5FWC3 203 aa11.12□□□□□ -0.63
Ercc1-203ENSMUST00000160369 CrhbpQ60571 322 aa11.12□□□□□ -0.63
Ercc1-203ENSMUST00000160369 DbpQ60925 325 aa11.12□□□□□ -0.63
Ercc1-203ENSMUST00000160369 Wipf2Q6PEV3 440 aa11.12□□□□□ -0.63
Ercc1-203ENSMUST00000160369 Olfr1042Q7TR81 313 aa11.12□□□□□ -0.63
Ercc1-203ENSMUST00000160369 Olfr504Q7TRU7 318 aa11.12□□□□□ -0.63
Ercc1-203ENSMUST00000160369 Ap3s2Q8BSZ2 193 aa11.12□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 56.5 ms