RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 OR5AC2Q9NZP5 309 aa9.6□□□□□ -0.87
LINC00339-213ENST00000642137 DMRT1Q9Y5R6 373 aa9.6□□□□□ -0.87
LINC00339-213ENST00000642137 TRAV14DV4A0A0A6YYC5 116 aa9.59□□□□□ -0.87
LINC00339-213ENST00000642137 A0A0G2JLM5 398 aa9.59□□□□□ -0.87
LINC00339-213ENST00000642137 FAM223BA6NKX1 122 aa9.59□□□□□ -0.87
LINC00339-213ENST00000642137 C15orf62A8K5M9 175 aa9.59□□□□□ -0.87
LINC00339-213ENST00000642137 OR2J3O76001 311 aa9.59□□□□□ -0.87
LINC00339-213ENST00000642137 NDUFB8O95169 186 aa9.59□□□□□ -0.87
LINC00339-213ENST00000642137 SLC25A4P12235 298 aa9.59□□□□□ -0.87
LINC00339-213ENST00000642137 Q5BKY6 102 aa9.59□□□□□ -0.87
LINC00339-213ENST00000642137 C19orf35Q6ZS72 473 aa9.59□□□□□ -0.87
LINC00339-213ENST00000642137 FAM223AQ8IWN6 122 aa9.59□□□□□ -0.87
LINC00339-213ENST00000642137 ZNF491Q8N8L2 437 aa9.59□□□□□ -0.87
LINC00339-213ENST00000642137 MYOZ3Q8TDC0 251 aa9.59□□□□□ -0.87
LINC00339-213ENST00000642137 OR4C12Q96R67 309 aa9.59□□□□□ -0.87
LINC00339-213ENST00000642137 RANGRFQ9HD47 186 aaPredicted RBP9.59□□□□□ -0.87
LINC00339-213ENST00000642137 LYRM2Q9NU23 88 aaPredicted RBP9.59□□□□□ -0.87
LINC00339-213ENST00000642137 FBXL7Q9UJT9 491 aa9.59□□□□□ -0.87
LINC00339-213ENST00000642137 JMJD1CQ15652 2540 aa9.59□□□□□ -0.87
LINC00339-213ENST00000642137 FAM24AA6NFZ4 105 aa9.58□□□□□ -0.88
LINC00339-213ENST00000642137 PMS2P5A8MQ11 134 aa9.58□□□□□ -0.88
LINC00339-213ENST00000642137 SCAF4O95104 1147 aaKnown RBP9.58□□□□□ -0.88
LINC00339-213ENST00000642137 IFNA4P05014 189 aa9.58□□□□□ -0.88
LINC00339-213ENST00000642137 RPLP1P05386 114 aaKnown RBP9.58□□□□□ -0.88
LINC00339-213ENST00000642137 OR8U8P0C7N1 319 aa9.58□□□□□ -0.88
LINC00339-213ENST00000642137 CD28P10747 220 aa9.58□□□□□ -0.88
LINC00339-213ENST00000642137 GPX4P36969 197 aaPredicted RBP9.58□□□□□ -0.88
LINC00339-213ENST00000642137 CDX1P47902 265 aaPredicted RBP9.58□□□□□ -0.88
LINC00339-213ENST00000642137 TPPP2P59282 170 aa9.58□□□□□ -0.88
LINC00339-213ENST00000642137 KRTAP10-3P60369 221 aa9.58□□□□□ -0.88
LINC00339-213ENST00000642137 RHOGP84095 191 aa9.58□□□□□ -0.88
LINC00339-213ENST00000642137 ATP5G2Q06055 141 aa9.58□□□□□ -0.88
LINC00339-213ENST00000642137 EXOSC2Q13868 293 aaKnown RBP9.58□□□□□ -0.88
LINC00339-213ENST00000642137 TCTEX1D4Q5JR98 221 aa9.58□□□□□ -0.88
LINC00339-213ENST00000642137 ETFRF1Q6IPR1 90 aa9.58□□□□□ -0.88
LINC00339-213ENST00000642137 ETV3LQ6ZN32 361 aa9.58□□□□□ -0.88
LINC00339-213ENST00000642137 TCTE3Q8IZS6 198 aa9.58□□□□□ -0.88
LINC00339-213ENST00000642137 TMEM252Q8N6L7 170 aa9.58□□□□□ -0.88
LINC00339-213ENST00000642137 VN1R17PQ8TDU5 208 aa9.58□□□□□ -0.88
LINC00339-213ENST00000642137 CXorf58Q96LI9 332 aa9.58□□□□□ -0.88
LINC00339-213ENST00000642137 UBE2E2Q96LR5 201 aa9.58□□□□□ -0.88
LINC00339-213ENST00000642137 SLC25A31Q9H0C2 315 aa9.58□□□□□ -0.88
LINC00339-213ENST00000642137 MBD2Q9UBB5 411 aa9.58□□□□□ -0.88
LINC00339-213ENST00000642137 RPS10-NUDT3A0A1W2PQS6 291 aa9.57□□□□□ -0.88
LINC00339-213ENST00000642137 TCRBV4S1A1TA0A5B7 111 aa9.57□□□□□ -0.88
LINC00339-213ENST00000642137 H3BP45 60 aa9.57□□□□□ -0.88
LINC00339-213ENST00000642137 I3L2K1 104 aa9.57□□□□□ -0.88
LINC00339-213ENST00000642137 CAV2P51636 162 aa9.57□□□□□ -0.88
LINC00339-213ENST00000642137 CD69Q07108 199 aa9.57□□□□□ -0.88
LINC00339-213ENST00000642137 LCNL1Q6ZST4 164 aa9.57□□□□□ -0.88
LINC00339-213ENST00000642137 AKAP14Q86UN6 197 aa9.57□□□□□ -0.88
LINC00339-213ENST00000642137 OR10P1Q8NGE3 313 aa9.57□□□□□ -0.88
LINC00339-213ENST00000642137 SCARB1Q8WTV0 552 aa9.57□□□□□ -0.88
LINC00339-213ENST00000642137 CACNG8Q8WXS5 425 aa9.57□□□□□ -0.88
LINC00339-213ENST00000642137 MISP3Q96FF7 219 aa9.57□□□□□ -0.88
LINC00339-213ENST00000642137 PAIP2BQ9ULR5 123 aaKnown RBP9.57□□□□□ -0.88
LINC00339-213ENST00000642137 TRBV7-1A0A0A6YYK4 115 aa9.56□□□□□ -0.88
LINC00339-213ENST00000642137 PRSS46E5RG02 174 aa9.56□□□□□ -0.88
LINC00339-213ENST00000642137 G3V3Q6 166 aa9.56□□□□□ -0.88
LINC00339-213ENST00000642137 K7EIM0 57 aa9.56□□□□□ -0.88
LINC00339-213ENST00000642137 MT-CO2P00403 227 aa9.56□□□□□ -0.88
LINC00339-213ENST00000642137 METTL15P1P0C7V9 234 aa9.56□□□□□ -0.88
LINC00339-213ENST00000642137 SULT1A1P50225 295 aa9.56□□□□□ -0.88
LINC00339-213ENST00000642137 MLANAQ16655 118 aa9.56□□□□□ -0.88
LINC00339-213ENST00000642137 C15orf32Q32M92 178 aa9.56□□□□□ -0.88
LINC00339-213ENST00000642137 FAM209BQ5JX69 171 aa9.56□□□□□ -0.88
LINC00339-213ENST00000642137 DCUN1D4Q92564 292 aa9.56□□□□□ -0.88
LINC00339-213ENST00000642137 EEF1AKMT3Q96AZ1 226 aa9.56□□□□□ -0.88
LINC00339-213ENST00000642137 PINX1Q96BK5 328 aaKnown RBP9.56□□□□□ -0.88
LINC00339-213ENST00000642137 ATP6V0BQ99437 205 aa9.56□□□□□ -0.88
LINC00339-213ENST00000642137 TXN2Q99757 166 aa9.56□□□□□ -0.88
LINC00339-213ENST00000642137 ZNF747Q9BV97 191 aa9.56□□□□□ -0.88
LINC00339-213ENST00000642137 FNDC4Q9H6D8 234 aaPredicted RBP9.56□□□□□ -0.88
LINC00339-213ENST00000642137 TSSC4Q9Y5U2 329 aaPredicted RBP9.56□□□□□ -0.88
LINC00339-213ENST00000642137 NF1P21359 2839 aa9.56□□□□□ -0.88
LINC00339-213ENST00000642137 IGSF23A1L1A6 192 aa9.55□□□□□ -0.88
LINC00339-213ENST00000642137 RPL12P30050 165 aaKnown RBP9.55□□□□□ -0.88
LINC00339-213ENST00000642137 S100A11P31949 105 aa9.55□□□□□ -0.88
LINC00339-213ENST00000642137 FCGR2BP31994 310 aaPredicted RBP9.55□□□□□ -0.88
LINC00339-213ENST00000642137 NUP62P37198 522 aaPredicted RBP9.55□□□□□ -0.88
LINC00339-213ENST00000642137 OPRK1P41145 380 aa9.55□□□□□ -0.88
LINC00339-213ENST00000642137 MFAP4P55083 255 aa9.55□□□□□ -0.88
LINC00339-213ENST00000642137 ZNF343Q6P1L6 599 aa9.55□□□□□ -0.88
LINC00339-213ENST00000642137 C12orf54Q6X4T0 127 aa9.55□□□□□ -0.88
LINC00339-213ENST00000642137 ZNF546Q86UE3 836 aa9.55□□□□□ -0.88
LINC00339-213ENST00000642137 STX12Q86Y82 276 aa9.55□□□□□ -0.88
LINC00339-213ENST00000642137 CITED1Q99966 193 aa9.55□□□□□ -0.88
LINC00339-213ENST00000642137 CITED2Q99967 270 aaPredicted RBP9.55□□□□□ -0.88
LINC00339-213ENST00000642137 NEURL2Q9BR09 285 aa9.55□□□□□ -0.88
LINC00339-213ENST00000642137 GGACTQ9BVM4 153 aa9.55□□□□□ -0.88
LINC00339-213ENST00000642137 C21orf62Q9NYP8 219 aa9.55□□□□□ -0.88
LINC00339-213ENST00000642137 SETD2Q9BYW2 2564 aaPredicted RBP9.54□□□□□ -0.88
LINC00339-213ENST00000642137 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.54□□□□□ -0.88
LINC00339-213ENST00000642137 MFSD2BA6NFX1 497 aa9.54□□□□□ -0.88
LINC00339-213ENST00000642137 HMSDA8MTL9 139 aa9.54□□□□□ -0.88
LINC00339-213ENST00000642137 FNDC10F2Z333 226 aa9.54□□□□□ -0.88
LINC00339-213ENST00000642137 SMLR1H3BR10 107 aa9.54□□□□□ -0.88
LINC00339-213ENST00000642137 DLK1P80370 383 aa9.54□□□□□ -0.88
LINC00339-213ENST00000642137 RUNX1Q01196 453 aa9.54□□□□□ -0.88
LINC00339-213ENST00000642137 EWSR1Q01844 656 aaKnown RBP eCLIP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms