RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 RPL27AP46776 148 aaKnown RBP13.75□□□□□ -0.21
PHGDH-234ENST00000642041 PPT1P50897 306 aa13.75□□□□□ -0.21
PHGDH-234ENST00000642041 PSG5Q15238 335 aa13.75□□□□□ -0.21
PHGDH-234ENST00000642041 ACOT6Q3I5F7 207 aaPredicted RBP13.75□□□□□ -0.21
PHGDH-234ENST00000642041 ZNF114Q8NC26 417 aa13.75□□□□□ -0.21
PHGDH-234ENST00000642041 C22orf15Q8WYQ4 148 aa13.75□□□□□ -0.21
PHGDH-234ENST00000642041 TRAV3A0A0B4J244 114 aa13.74□□□□□ -0.21
PHGDH-234ENST00000642041 RRHO14718 337 aa13.74□□□□□ -0.21
PHGDH-234ENST00000642041 SLC25A17O43808 307 aa13.74□□□□□ -0.21
PHGDH-234ENST00000642041 NDUFA3O95167 84 aa13.74□□□□□ -0.21
PHGDH-234ENST00000642041 MSMBP08118 114 aa13.74□□□□□ -0.21
PHGDH-234ENST00000642041 MDKP21741 143 aaPredicted RBP13.74□□□□□ -0.21
PHGDH-234ENST00000642041 ZP3P21754 424 aa13.74□□□□□ -0.21
PHGDH-234ENST00000642041 TMEM41BQ5BJD5 291 aa13.74□□□□□ -0.21
PHGDH-234ENST00000642041 TEPPQ6URK8 271 aa13.74□□□□□ -0.21
PHGDH-234ENST00000642041 TMEM182Q6ZP80 229 aaPredicted RBP13.74□□□□□ -0.21
PHGDH-234ENST00000642041 BSCL2Q96G97 398 aaPredicted RBP13.74□□□□□ -0.21
PHGDH-234ENST00000642041 HINT2Q9BX68 163 aa13.74□□□□□ -0.21
PHGDH-234ENST00000642041 ZNF430Q9H8G1 570 aaPredicted RBP13.74□□□□□ -0.21
PHGDH-234ENST00000642041 METTL1Q9UBP6 276 aaKnown RBP13.74□□□□□ -0.21
PHGDH-234ENST00000642041 NBR2O15453 112 aa13.73□□□□□ -0.21
PHGDH-234ENST00000642041 FGF7P21781 194 aa13.73□□□□□ -0.21
PHGDH-234ENST00000642041 OPRK1P41145 380 aa13.73□□□□□ -0.21
PHGDH-234ENST00000642041 ZNF616Q08AN1 781 aa13.73□□□□□ -0.21
PHGDH-234ENST00000642041 PLGLAQ15195 96 aa13.73□□□□□ -0.21
PHGDH-234ENST00000642041 HCP5Q6MZN7 132 aa13.73□□□□□ -0.21
PHGDH-234ENST00000642041 TMEM144Q7Z5S9 345 aa13.73□□□□□ -0.21
PHGDH-234ENST00000642041 HAPLN4Q86UW8 402 aa13.73□□□□□ -0.21
PHGDH-234ENST00000642041 MBD3L1Q8WWY6 194 aa13.73□□□□□ -0.21
PHGDH-234ENST00000642041 CXorf58Q96LI9 332 aa13.73□□□□□ -0.21
PHGDH-234ENST00000642041 TMEM68Q96MH6 324 aa13.73□□□□□ -0.21
PHGDH-234ENST00000642041 HRH4Q9H3N8 390 aa13.73□□□□□ -0.21
PHGDH-234ENST00000642041 UBE2L5PA0A1B0GUS4 154 aa13.72□□□□□ -0.21
PHGDH-234ENST00000642041 RNASEK-C17orf49H0YIS7 233 aa13.72□□□□□ -0.21
PHGDH-234ENST00000642041 TIMM23O14925 209 aa13.72□□□□□ -0.21
PHGDH-234ENST00000642041 MT-CO2P00403 227 aa13.72□□□□□ -0.21
PHGDH-234ENST00000642041 CA2P00918 260 aa13.72□□□□□ -0.21
PHGDH-234ENST00000642041 IFNA1P01562 189 aa13.72□□□□□ -0.21
PHGDH-234ENST00000642041 ARL16Q0P5N6 197 aa13.72□□□□□ -0.21
PHGDH-234ENST00000642041 FAM213BQ8TBF2 198 aa13.72□□□□□ -0.21
PHGDH-234ENST00000642041 CFHR4Q92496 578 aa13.72□□□□□ -0.21
PHGDH-234ENST00000642041 ACTR3CQ9C0K3 210 aaPredicted RBP13.72□□□□□ -0.21
PHGDH-234ENST00000642041 ZNRD1Q9P1U0 126 aa13.72□□□□□ -0.21
PHGDH-234ENST00000642041 M6PRP20645 277 aa13.71□□□□□ -0.21
PHGDH-234ENST00000642041 DIAPH2-AS1Q14236 149 aa13.71□□□□□ -0.21
PHGDH-234ENST00000642041 RBMS3Q6XE24 437 aaKnown RBP13.71□□□□□ -0.21
PHGDH-234ENST00000642041 OR1P1Q8NH06 330 aa13.71□□□□□ -0.21
PHGDH-234ENST00000642041 NANPQ8TBE9 248 aa13.71□□□□□ -0.21
PHGDH-234ENST00000642041 SUN5Q8TC36 379 aa13.71□□□□□ -0.21
PHGDH-234ENST00000642041 SLC35E1Q96K37 410 aa13.71□□□□□ -0.21
PHGDH-234ENST00000642041 RNF2Q99496 336 aa13.71□□□□□ -0.21
PHGDH-234ENST00000642041 NPCDR1Q9BY65 106 aa13.71□□□□□ -0.21
PHGDH-234ENST00000642041 WNK2Q9Y3S1 2297 aa13.71□□□□□ -0.21
PHGDH-234ENST00000642041 PRSS46E5RG02 174 aa13.7□□□□□ -0.22
PHGDH-234ENST00000642041 NPFFO15130 113 aa13.7□□□□□ -0.22
PHGDH-234ENST00000642041 SCGB2A1O75556 95 aa13.7□□□□□ -0.22
PHGDH-234ENST00000642041 RPL29P47914 159 aaKnown RBP13.7□□□□□ -0.22
PHGDH-234ENST00000642041 SELENOTP62341 195 aa13.7□□□□□ -0.22
PHGDH-234ENST00000642041 CD69Q07108 199 aa13.7□□□□□ -0.22
PHGDH-234ENST00000642041 MMDQ15546 238 aa13.7□□□□□ -0.22
PHGDH-234ENST00000642041 PVRIGQ6DKI7 326 aa13.7□□□□□ -0.22
PHGDH-234ENST00000642041 ZNF562Q6V9R5 426 aa13.7□□□□□ -0.22
PHGDH-234ENST00000642041 EAF1Q96JC9 268 aaPredicted RBP13.7□□□□□ -0.22
PHGDH-234ENST00000642041 TBX15Q96SF7 602 aa13.7□□□□□ -0.22
PHGDH-234ENST00000642041 AVPP01185 164 aa13.69□□□□□ -0.22
PHGDH-234ENST00000642041 IGKV1D-33P01593 117 aa13.69□□□□□ -0.22
PHGDH-234ENST00000642041 IGKV1-33P01594 117 aa13.69□□□□□ -0.22
PHGDH-234ENST00000642041 RNASE2P10153 161 aaKnown RBP13.69□□□□□ -0.22
PHGDH-234ENST00000642041 SSX2Q16385 188 aa13.69□□□□□ -0.22
PHGDH-234ENST00000642041 TNXAQ16473 311 aa13.69□□□□□ -0.22
PHGDH-234ENST00000642041 S100A7AQ86SG5 101 aa13.69□□□□□ -0.22
PHGDH-234ENST00000642041 TXNDC17Q9BRA2 123 aa13.69□□□□□ -0.22
PHGDH-234ENST00000642041 MEGF9Q9H1U4 602 aa13.69□□□□□ -0.22
PHGDH-234ENST00000642041 SH3BGRL3Q9H299 93 aa13.69□□□□□ -0.22
PHGDH-234ENST00000642041 SLC39A9Q9NUM3 307 aa13.69□□□□□ -0.22
PHGDH-234ENST00000642041 HILPDAQ9Y5L2 63 aa13.69□□□□□ -0.22
PHGDH-234ENST00000642041 IGHV1-69DA0A0B4J2H0 117 aa13.68□□□□□ -0.22
PHGDH-234ENST00000642041 CTXND1A0A1B0GTU2 59 aa13.68□□□□□ -0.22
PHGDH-234ENST00000642041 CNIH1O95406 144 aa13.68□□□□□ -0.22
PHGDH-234ENST00000642041 IGHV1-69P01742 117 aa13.68□□□□□ -0.22
PHGDH-234ENST00000642041 FABP1P07148 127 aa13.68□□□□□ -0.22
PHGDH-234ENST00000642041 AKR1C1Q04828 323 aa13.68□□□□□ -0.22
PHGDH-234ENST00000642041 HES1Q14469 280 aa13.68□□□□□ -0.22
PHGDH-234ENST00000642041 C5orf64Q2M2E5 130 aa13.68□□□□□ -0.22
PHGDH-234ENST00000642041 CCDC28AQ8IWP9 274 aa13.68□□□□□ -0.22
PHGDH-234ENST00000642041 SEC11CQ9BY50 192 aa13.68□□□□□ -0.22
PHGDH-234ENST00000642041 THYN1Q9P016 225 aa13.68□□□□□ -0.22
PHGDH-234ENST00000642041 LSM4Q9Y4Z0 139 aaKnown RBP13.68□□□□□ -0.22
PHGDH-234ENST00000642041 A0A1W2PPV4 95 aa13.67□□□□□ -0.22
PHGDH-234ENST00000642041 TMEM218A2RU14 115 aa13.67□□□□□ -0.22
PHGDH-234ENST00000642041 SMCO3A2RU48 225 aa13.67□□□□□ -0.22
PHGDH-234ENST00000642041 CD5P06127 495 aa13.67□□□□□ -0.22
PHGDH-234ENST00000642041 OR13C7P0DN81 318 aa13.67□□□□□ -0.22
PHGDH-234ENST00000642041 TMEM11P17152 192 aa13.67□□□□□ -0.22
PHGDH-234ENST00000642041 TUSC1Q2TAM9 212 aa13.67□□□□□ -0.22
PHGDH-234ENST00000642041 KHDC3LQ587J8 217 aa13.67□□□□□ -0.22
PHGDH-234ENST00000642041 SPINK9Q5DT21 86 aa13.67□□□□□ -0.22
PHGDH-234ENST00000642041 TOR2AQ5JU69 321 aa13.67□□□□□ -0.22
PHGDH-234ENST00000642041 PCNPQ8WW12 178 aaKnown RBP13.67□□□□□ -0.22
PHGDH-234ENST00000642041 PITPNC1Q9UKF7 332 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms