RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 KCNIP3Q9Y2W7 256 aa11.36□□□□□ -0.59
PHGDH-231ENST00000641939 UFC1Q9Y3C8 167 aa11.36□□□□□ -0.59
PHGDH-231ENST00000641939 TMEM56-RWDD3S4R434 201 aa11.36□□□□□ -0.59
PHGDH-231ENST00000641939 U3KQK5 164 aa11.36□□□□□ -0.59
PHGDH-231ENST00000641939 ZNF785A8K8V0 405 aa11.35□□□□□ -0.59
PHGDH-231ENST00000641939 A8MZ25 164 aa11.35□□□□□ -0.59
PHGDH-231ENST00000641939 I3L2K1 104 aa11.35□□□□□ -0.59
PHGDH-231ENST00000641939 MT-CO2P00403 227 aa11.35□□□□□ -0.59
PHGDH-231ENST00000641939 SNCAP37840 140 aa11.35□□□□□ -0.59
PHGDH-231ENST00000641939 ETV6P41212 452 aa11.35□□□□□ -0.59
PHGDH-231ENST00000641939 HOXA1P49639 335 aaPredicted RBP11.35□□□□□ -0.59
PHGDH-231ENST00000641939 ELLP55199 621 aaPredicted RBP11.35□□□□□ -0.59
PHGDH-231ENST00000641939 TMEM268Q5VZI3 342 aa11.35□□□□□ -0.59
PHGDH-231ENST00000641939 Q6ZRM9 215 aa11.35□□□□□ -0.59
PHGDH-231ENST00000641939 SBSPONQ8IVN8 264 aa11.35□□□□□ -0.59
PHGDH-231ENST00000641939 DEDD2Q8WXF8 326 aa11.35□□□□□ -0.59
PHGDH-231ENST00000641939 TMEM190Q8WZ59 177 aa11.35□□□□□ -0.59
PHGDH-231ENST00000641939 MARC2Q969Z3 335 aa11.35□□□□□ -0.59
PHGDH-231ENST00000641939 TMEM230Q96A57 120 aa11.35□□□□□ -0.59
PHGDH-231ENST00000641939 CHRDL1Q9BU40 450 aa11.35□□□□□ -0.59
PHGDH-231ENST00000641939 ENY2Q9NPA8 101 aa11.35□□□□□ -0.59
PHGDH-231ENST00000641939 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.35□□□□□ -0.59
PHGDH-231ENST00000641939 GAR1Q9NY12 217 aaKnown RBP11.35□□□□□ -0.59
PHGDH-231ENST00000641939 C8orf88P0DMB2 117 aa11.34□□□□□ -0.59
PHGDH-231ENST00000641939 AKR1C4P17516 323 aa11.34□□□□□ -0.59
PHGDH-231ENST00000641939 FCGR2BP31994 310 aaPredicted RBP11.34□□□□□ -0.59
PHGDH-231ENST00000641939 ADMP35318 185 aa11.34□□□□□ -0.59
PHGDH-231ENST00000641939 MFAP4P55083 255 aa11.34□□□□□ -0.59
PHGDH-231ENST00000641939 TMEM187Q14656 261 aa11.34□□□□□ -0.59
PHGDH-231ENST00000641939 GUCA2BQ16661 112 aa11.34□□□□□ -0.59
PHGDH-231ENST00000641939 AARDQ4LEZ3 155 aa11.34□□□□□ -0.59
PHGDH-231ENST00000641939 ZNF57Q68EA5 555 aaPredicted RBP11.34□□□□□ -0.59
PHGDH-231ENST00000641939 IL22RA2Q969J5 263 aa11.34□□□□□ -0.59
PHGDH-231ENST00000641939 TXN2Q99757 166 aa11.34□□□□□ -0.59
PHGDH-231ENST00000641939 C19orf73Q9NVV2 129 aa11.34□□□□□ -0.59
PHGDH-231ENST00000641939 MRPL27Q9P0M9 148 aaKnown RBP11.34□□□□□ -0.59
PHGDH-231ENST00000641939 MLXQ9UH92 298 aa11.34□□□□□ -0.59
PHGDH-231ENST00000641939 NDUFA4O00483 81 aa11.33□□□□□ -0.6
PHGDH-231ENST00000641939 CTSGP08311 255 aa11.33□□□□□ -0.6
PHGDH-231ENST00000641939 SUB1P53999 127 aaKnown RBP eCLIP11.33□□□□□ -0.6
PHGDH-231ENST00000641939 CD81P60033 236 aa11.33□□□□□ -0.6
PHGDH-231ENST00000641939 SPCS3P61009 180 aa11.33□□□□□ -0.6
PHGDH-231ENST00000641939 SUPT4H1P63272 117 aaKnown RBP11.33□□□□□ -0.6
PHGDH-231ENST00000641939 OR52E5Q8NH55 327 aa11.33□□□□□ -0.6
PHGDH-231ENST00000641939 PINX1Q96BK5 328 aaKnown RBP11.33□□□□□ -0.6
PHGDH-231ENST00000641939 GPR146Q96CH1 333 aa11.33□□□□□ -0.6
PHGDH-231ENST00000641939 WDR89Q96FK6 387 aaPredicted RBP11.33□□□□□ -0.6
PHGDH-231ENST00000641939 DAZ1Q9NQZ3 744 aaKnown RBP11.33□□□□□ -0.6
PHGDH-231ENST00000641939 CACNG5Q9UF02 275 aa11.33□□□□□ -0.6
PHGDH-231ENST00000641939 CORTO00230 105 aa11.32□□□□□ -0.6
PHGDH-231ENST00000641939 NUPL2O15504 423 aaKnown RBP11.32□□□□□ -0.6
PHGDH-231ENST00000641939 IGHV3-48P01763 117 aa11.32□□□□□ -0.6
PHGDH-231ENST00000641939 RNASE2P10153 161 aaKnown RBP11.32□□□□□ -0.6
PHGDH-231ENST00000641939 ANXA3P12429 323 aa11.32□□□□□ -0.6
PHGDH-231ENST00000641939 RELQ04864 619 aaPredicted RBP11.32□□□□□ -0.6
PHGDH-231ENST00000641939 PVRIGQ6DKI7 326 aa11.32□□□□□ -0.6
PHGDH-231ENST00000641939 BTNL8Q6UX41 500 aa11.32□□□□□ -0.6
PHGDH-231ENST00000641939 TMEM61Q8N0U2 210 aa11.32□□□□□ -0.6
PHGDH-231ENST00000641939 WWC2-AS2Q96NR7 200 aa11.32□□□□□ -0.6
PHGDH-231ENST00000641939 NEURL2Q9BR09 285 aa11.32□□□□□ -0.6
PHGDH-231ENST00000641939 SRRQ9GZT4 340 aa11.32□□□□□ -0.6
PHGDH-231ENST00000641939 TUBA4BQ9H853 241 aa11.32□□□□□ -0.6
PHGDH-231ENST00000641939 PRR13Q9NZ81 148 aa11.32□□□□□ -0.6
PHGDH-231ENST00000641939 NDUFA13Q9P0J0 144 aa11.32□□□□□ -0.6
PHGDH-231ENST00000641939 SELENOKQ9Y6D0 94 aa11.32□□□□□ -0.6
PHGDH-231ENST00000641939 CD7P09564 240 aa11.31□□□□□ -0.6
PHGDH-231ENST00000641939 SRPXP78539 464 aa11.31□□□□□ -0.6
PHGDH-231ENST00000641939 TMED4Q7Z7H5 227 aa11.31□□□□□ -0.6
PHGDH-231ENST00000641939 SLC25A21Q9BQT8 299 aaPredicted RBP11.31□□□□□ -0.6
PHGDH-231ENST00000641939 C20orf24Q9BUV8 137 aa11.31□□□□□ -0.6
PHGDH-231ENST00000641939 ZMAT4Q9H898 229 aa11.31□□□□□ -0.6
PHGDH-231ENST00000641939 CACFD1Q9UGQ2 172 aa11.31□□□□□ -0.6
PHGDH-231ENST00000641939 DNAH7Q8WXX0 4024 aa11.31□□□□□ -0.6
PHGDH-231ENST00000641939 IGHV3OR16-8A0A075B7F1 116 aa11.3□□□□□ -0.6
PHGDH-231ENST00000641939 TRAV25A0A0B4J276 109 aa11.3□□□□□ -0.6
PHGDH-231ENST00000641939 A0A0B4J2A0 478 aa11.3□□□□□ -0.6
PHGDH-231ENST00000641939 K7EMT4 169 aa11.3□□□□□ -0.6
PHGDH-231ENST00000641939 GNG7O60262 68 aa11.3□□□□□ -0.6
PHGDH-231ENST00000641939 SULT1A3P0DMM9 295 aa11.3□□□□□ -0.6
PHGDH-231ENST00000641939 SULT1A4P0DMN0 295 aa11.3□□□□□ -0.6
PHGDH-231ENST00000641939 NPBWR1P48145 328 aa11.3□□□□□ -0.6
PHGDH-231ENST00000641939 BSXQ3C1V8 233 aa11.3□□□□□ -0.6
PHGDH-231ENST00000641939 TMEM128Q5BJH2 165 aa11.3□□□□□ -0.6
PHGDH-231ENST00000641939 RBPMS2Q6ZRY4 209 aaKnown RBP11.3□□□□□ -0.6
PHGDH-231ENST00000641939 LGI3Q8N145 548 aa11.3□□□□□ -0.6
PHGDH-231ENST00000641939 DUSP18Q8NEJ0 188 aa11.3□□□□□ -0.6
PHGDH-231ENST00000641939 HEYLQ9NQ87 328 aaPredicted RBP11.3□□□□□ -0.6
PHGDH-231ENST00000641939 SHPKQ9UHJ6 478 aa11.3□□□□□ -0.6
PHGDH-231ENST00000641939 NBEAL2Q6ZNJ1 2754 aa11.3□□□□□ -0.6
PHGDH-231ENST00000641939 PIGBOS1A0A0B4J2F0 54 aa11.29□□□□□ -0.6
PHGDH-231ENST00000641939 C15orf62A8K5M9 175 aa11.29□□□□□ -0.6
PHGDH-231ENST00000641939 ZNF207O43670 478 aaKnown RBP11.29□□□□□ -0.6
PHGDH-231ENST00000641939 SCAF4O95104 1147 aaKnown RBP11.29□□□□□ -0.6
PHGDH-231ENST00000641939 HTR2BP41595 481 aa11.29□□□□□ -0.6
PHGDH-231ENST00000641939 INPP1P49441 399 aa11.29□□□□□ -0.6
PHGDH-231ENST00000641939 ANKRD55Q3KP44 614 aa11.29□□□□□ -0.6
PHGDH-231ENST00000641939 TRIQKQ629K1 86 aa11.29□□□□□ -0.6
PHGDH-231ENST00000641939 SLC16A13Q7RTY0 426 aa11.29□□□□□ -0.6
PHGDH-231ENST00000641939 LYZL2Q7Z4W2 148 aa11.29□□□□□ -0.6
PHGDH-231ENST00000641939 ZNF414Q96IQ9 312 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms