RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 NDUFA7O95182 113 aa13.68□□□□□ -0.22
PHGDH-230ENST00000641927 SULT1A1P50225 295 aa13.68□□□□□ -0.22
PHGDH-230ENST00000641927 NKX2-5P52952 324 aaPredicted RBP13.68□□□□□ -0.22
PHGDH-230ENST00000641927 NHLH2Q02577 135 aa13.68□□□□□ -0.22
PHGDH-230ENST00000641927 TMEM65Q6PI78 240 aa13.68□□□□□ -0.22
PHGDH-230ENST00000641927 LINC01006Q8NI28 216 aa13.68□□□□□ -0.22
PHGDH-230ENST00000641927 MFFQ9GZY8 342 aa13.68□□□□□ -0.22
PHGDH-230ENST00000641927 DMRT1Q9Y5R6 373 aa13.68□□□□□ -0.22
PHGDH-230ENST00000641927 HMSDA8MTL9 139 aa13.67□□□□□ -0.22
PHGDH-230ENST00000641927 OR2J3O76001 311 aa13.67□□□□□ -0.22
PHGDH-230ENST00000641927 PF4V1P10720 104 aa13.67□□□□□ -0.22
PHGDH-230ENST00000641927 OPRK1P41145 380 aa13.67□□□□□ -0.22
PHGDH-230ENST00000641927 DEFA5Q01523 94 aa13.67□□□□□ -0.22
PHGDH-230ENST00000641927 CFHR3Q02985 330 aa13.67□□□□□ -0.22
PHGDH-230ENST00000641927 C10orf99Q6UWK7 81 aa13.67□□□□□ -0.22
PHGDH-230ENST00000641927 OR10P1Q8NGE3 313 aa13.67□□□□□ -0.22
PHGDH-230ENST00000641927 IGHV3-21A0A0B4J1V1 117 aa13.66□□□□□ -0.22
PHGDH-230ENST00000641927 HAX1O00165 279 aa13.66□□□□□ -0.22
PHGDH-230ENST00000641927 CORTO00230 105 aa13.66□□□□□ -0.22
PHGDH-230ENST00000641927 ACOT7LQ6ZUV0 252 aa13.66□□□□□ -0.22
PHGDH-230ENST00000641927 RNASEH2CQ8TDP1 164 aaKnown RBP13.66□□□□□ -0.22
PHGDH-230ENST00000641927 FANCD2OSQ96PS1 177 aa13.66□□□□□ -0.22
PHGDH-230ENST00000641927 AQP10Q96PS8 301 aa13.66□□□□□ -0.22
PHGDH-230ENST00000641927 THYN1Q9P016 225 aa13.66□□□□□ -0.22
PHGDH-230ENST00000641927 JMJD1CQ15652 2540 aa13.66□□□□□ -0.22
PHGDH-230ENST00000641927 IGLV11-55A0A075B6I3 123 aa13.66□□□□□ -0.22
PHGDH-230ENST00000641927 TRGV3P03979 118 aa13.66□□□□□ -0.22
PHGDH-230ENST00000641927 HIST1H1BP16401 226 aaKnown RBP13.66□□□□□ -0.22
PHGDH-230ENST00000641927 TPPP2P59282 170 aa13.66□□□□□ -0.22
PHGDH-230ENST00000641927 HBG1P69891 147 aa13.66□□□□□ -0.22
PHGDH-230ENST00000641927 HBG2P69892 147 aa13.66□□□□□ -0.22
PHGDH-230ENST00000641927 BAXQ07812 192 aa13.66□□□□□ -0.22
PHGDH-230ENST00000641927 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.66□□□□□ -0.22
PHGDH-230ENST00000641927 SMIM3Q9BZL3 60 aa13.66□□□□□ -0.22
PHGDH-230ENST00000641927 FBXL7Q9UJT9 491 aa13.66□□□□□ -0.22
PHGDH-230ENST00000641927 RNF222A6NCQ9 220 aa13.65□□□□□ -0.22
PHGDH-230ENST00000641927 IGHV3-48P01763 117 aa13.65□□□□□ -0.22
PHGDH-230ENST00000641927 IGHG4P01861 327 aa13.65□□□□□ -0.22
PHGDH-230ENST00000641927 MDKP21741 143 aaPredicted RBP13.65□□□□□ -0.22
PHGDH-230ENST00000641927 RHOGP84095 191 aa13.65□□□□□ -0.22
PHGDH-230ENST00000641927 ARL16Q0P5N6 197 aa13.65□□□□□ -0.22
PHGDH-230ENST00000641927 TEX38Q6PEX7 206 aa13.65□□□□□ -0.22
PHGDH-230ENST00000641927 LCNL1Q6ZST4 164 aa13.65□□□□□ -0.22
PHGDH-230ENST00000641927 LILRB2Q8N423 598 aa13.65□□□□□ -0.22
PHGDH-230ENST00000641927 KLHDC1Q8N7A1 406 aa13.65□□□□□ -0.22
PHGDH-230ENST00000641927 RNF114Q9Y508 228 aa13.65□□□□□ -0.22
PHGDH-230ENST00000641927 HSPB11Q9Y547 144 aa13.65□□□□□ -0.22
PHGDH-230ENST00000641927 PMS2P5A8MQ11 134 aa13.64□□□□□ -0.23
PHGDH-230ENST00000641927 H3BUA1 57 aa13.64□□□□□ -0.23
PHGDH-230ENST00000641927 MT-CO2P00403 227 aa13.64□□□□□ -0.23
PHGDH-230ENST00000641927 IGLV1-40P01703 118 aa13.64□□□□□ -0.23
PHGDH-230ENST00000641927 SLC38A11Q08AI6 406 aa13.64□□□□□ -0.23
PHGDH-230ENST00000641927 EXOSC2Q13868 293 aaKnown RBP13.64□□□□□ -0.23
PHGDH-230ENST00000641927 MLANAQ16655 118 aa13.64□□□□□ -0.23
PHGDH-230ENST00000641927 HAPLN4Q86UW8 402 aa13.64□□□□□ -0.23
PHGDH-230ENST00000641927 OR5AU1Q8NGC0 362 aa13.64□□□□□ -0.23
PHGDH-230ENST00000641927 OR1S2Q8NGQ3 325 aa13.64□□□□□ -0.23
PHGDH-230ENST00000641927 OR5C1Q8NGR4 320 aa13.64□□□□□ -0.23
PHGDH-230ENST00000641927 BSCL2Q96G97 398 aaPredicted RBP13.64□□□□□ -0.23
PHGDH-230ENST00000641927 KLK15Q9H2R5 256 aa13.64□□□□□ -0.23
PHGDH-230ENST00000641927 S4R3C0 116 aa13.64□□□□□ -0.23
PHGDH-230ENST00000641927 SMCO3A2RU48 225 aa13.63□□□□□ -0.23
PHGDH-230ENST00000641927 CLPSL1A2RUU4 121 aa13.63□□□□□ -0.23
PHGDH-230ENST00000641927 SCAF4O95104 1147 aaKnown RBP13.63□□□□□ -0.23
PHGDH-230ENST00000641927 NDUFB8O95169 186 aa13.63□□□□□ -0.23
PHGDH-230ENST00000641927 CXCL2P19875 107 aa13.63□□□□□ -0.23
PHGDH-230ENST00000641927 S100A11P31949 105 aa13.63□□□□□ -0.23
PHGDH-230ENST00000641927 OR2F1Q13607 317 aa13.63□□□□□ -0.23
PHGDH-230ENST00000641927 CLINT1Q14677 625 aa13.63□□□□□ -0.23
PHGDH-230ENST00000641927 PVRIGQ6DKI7 326 aa13.63□□□□□ -0.23
PHGDH-230ENST00000641927 PRIMA1Q86XR5 153 aa13.63□□□□□ -0.23
PHGDH-230ENST00000641927 NECAP1Q8NC96 275 aa13.63□□□□□ -0.23
PHGDH-230ENST00000641927 SLA2Q9H6Q3 261 aa13.63□□□□□ -0.23
PHGDH-230ENST00000641927 TRBV9A0A0B4J1U6 114 aa13.63□□□□□ -0.23
PHGDH-230ENST00000641927 RPS10-NUDT3A0A1W2PQS6 291 aa13.63□□□□□ -0.23
PHGDH-230ENST00000641927 PSMB8P28062 276 aa13.63□□□□□ -0.23
PHGDH-230ENST00000641927 RAB9AP51151 201 aa13.63□□□□□ -0.23
PHGDH-230ENST00000641927 CD69Q07108 199 aa13.63□□□□□ -0.23
PHGDH-230ENST00000641927 C15orf32Q32M92 178 aa13.63□□□□□ -0.23
PHGDH-230ENST00000641927 ETFRF1Q6IPR1 90 aa13.63□□□□□ -0.23
PHGDH-230ENST00000641927 SLC16A13Q7RTY0 426 aa13.63□□□□□ -0.23
PHGDH-230ENST00000641927 FNDC4Q9H6D8 234 aaPredicted RBP13.63□□□□□ -0.23
PHGDH-230ENST00000641927 C2CD3Q4AC94 2353 aa13.62□□□□□ -0.23
PHGDH-230ENST00000641927 FAM223BA6NKX1 122 aa13.62□□□□□ -0.23
PHGDH-230ENST00000641927 PRSS46E5RG02 174 aa13.62□□□□□ -0.23
PHGDH-230ENST00000641927 I3L2K1 104 aa13.62□□□□□ -0.23
PHGDH-230ENST00000641927 K7EIM0 57 aa13.62□□□□□ -0.23
PHGDH-230ENST00000641927 FOXE3Q13461 319 aa13.62□□□□□ -0.23
PHGDH-230ENST00000641927 ZNF345Q14585 488 aa13.62□□□□□ -0.23
PHGDH-230ENST00000641927 FAM223AQ8IWN6 122 aa13.62□□□□□ -0.23
PHGDH-230ENST00000641927 UBAC2Q8NBM4 344 aa13.62□□□□□ -0.23
PHGDH-230ENST00000641927 OR4X2Q8NGF9 303 aa13.62□□□□□ -0.23
PHGDH-230ENST00000641927 SLC35E1Q96K37 410 aa13.62□□□□□ -0.23
PHGDH-230ENST00000641927 FBXL17Q9UF56 701 aa13.62□□□□□ -0.23
PHGDH-230ENST00000641927 A0A0D9SG52 128 aa13.61□□□□□ -0.23
PHGDH-230ENST00000641927 TMEM89A2RUT3 159 aa13.61□□□□□ -0.23
PHGDH-230ENST00000641927 IGHV3-23P01764 117 aa13.61□□□□□ -0.23
PHGDH-230ENST00000641927 ELANEP08246 267 aa13.61□□□□□ -0.23
PHGDH-230ENST00000641927 GPX4P36969 197 aaPredicted RBP13.61□□□□□ -0.23
PHGDH-230ENST00000641927 ATP5G2Q06055 141 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms