RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 NOL4LQ96MY1 436 aaPredicted RBP7.35□□□□□ -1.23
PHGDH-228ENST00000641847 OR4C12Q96R67 309 aa7.35□□□□□ -1.23
PHGDH-228ENST00000641847 RNF126Q9BV68 326 aa7.35□□□□□ -1.23
PHGDH-228ENST00000641847 PSENENQ9NZ42 101 aa7.35□□□□□ -1.23
PHGDH-228ENST00000641847 PAIP2BQ9ULR5 123 aaKnown RBP7.35□□□□□ -1.23
PHGDH-228ENST00000641847 SACSQ9NZJ4 4579 aa7.34□□□□□ -1.23
PHGDH-228ENST00000641847 IGSF23A1L1A6 192 aa7.34□□□□□ -1.23
PHGDH-228ENST00000641847 C15orf62A8K5M9 175 aa7.34□□□□□ -1.23
PHGDH-228ENST00000641847 NPIPB5A8MRT5 1133 aa7.34□□□□□ -1.23
PHGDH-228ENST00000641847 FBXO24O75426 580 aa7.34□□□□□ -1.23
PHGDH-228ENST00000641847 IFNA10P01566 189 aa7.34□□□□□ -1.23
PHGDH-228ENST00000641847 C1QBP02746 253 aa7.34□□□□□ -1.23
PHGDH-228ENST00000641847 OR8U8P0C7N1 319 aa7.34□□□□□ -1.23
PHGDH-228ENST00000641847 RNASE2P10153 161 aaKnown RBP7.34□□□□□ -1.23
PHGDH-228ENST00000641847 CTRB1P17538 263 aa7.34□□□□□ -1.23
PHGDH-228ENST00000641847 NPY1RP25929 384 aa7.34□□□□□ -1.23
PHGDH-228ENST00000641847 SNCAP37840 140 aa7.34□□□□□ -1.23
PHGDH-228ENST00000641847 HTR2BP41595 481 aa7.34□□□□□ -1.23
PHGDH-228ENST00000641847 TAS2R30P59541 319 aa7.34□□□□□ -1.23
PHGDH-228ENST00000641847 RPP30P78346 268 aaKnown RBP7.34□□□□□ -1.23
PHGDH-228ENST00000641847 BSXQ3C1V8 233 aa7.34□□□□□ -1.23
PHGDH-228ENST00000641847 AKIRIN2Q53H80 203 aa7.34□□□□□ -1.23
PHGDH-228ENST00000641847 C19orf54Q5BKX5 351 aa7.34□□□□□ -1.23
PHGDH-228ENST00000641847 CTRB2Q6GPI1 263 aa7.34□□□□□ -1.23
PHGDH-228ENST00000641847 STPG2Q8N412 459 aa7.34□□□□□ -1.23
PHGDH-228ENST00000641847 TTC9CQ8N5M4 171 aa7.34□□□□□ -1.23
PHGDH-228ENST00000641847 TMEM170AQ8WVE7 144 aa7.34□□□□□ -1.23
PHGDH-228ENST00000641847 TMEM68Q96MH6 324 aa7.34□□□□□ -1.23
PHGDH-228ENST00000641847 P2RX4Q99571 388 aa7.34□□□□□ -1.23
PHGDH-228ENST00000641847 LYRM2Q9NU23 88 aaPredicted RBP7.34□□□□□ -1.23
PHGDH-228ENST00000641847 ZNF580Q9UK33 172 aa7.34□□□□□ -1.23
PHGDH-228ENST00000641847 STRAPQ9Y3F4 350 aaKnown RBP7.34□□□□□ -1.23
PHGDH-228ENST00000641847 F11RQ9Y624 299 aaKnown RBP7.34□□□□□ -1.23
PHGDH-228ENST00000641847 DYNC2H1Q8NCM8 4307 aaKnown RBP7.33□□□□□ -1.24
PHGDH-228ENST00000641847 FAM24AA6NFZ4 105 aa7.33□□□□□ -1.24
PHGDH-228ENST00000641847 ARPC5O15511 151 aa7.33□□□□□ -1.24
PHGDH-228ENST00000641847 CRYGCP07315 174 aa7.33□□□□□ -1.24
PHGDH-228ENST00000641847 METTL15P1P0C7V9 234 aa7.33□□□□□ -1.24
PHGDH-228ENST00000641847 DEFA4P12838 97 aa7.33□□□□□ -1.24
PHGDH-228ENST00000641847 CD33P20138 364 aa7.33□□□□□ -1.24
PHGDH-228ENST00000641847 SUB1P53999 127 aaKnown RBP eCLIP7.33□□□□□ -1.24
PHGDH-228ENST00000641847 RAB11AP62491 216 aa7.33□□□□□ -1.24
PHGDH-228ENST00000641847 EWSR1Q01844 656 aaKnown RBP eCLIP7.33□□□□□ -1.24
PHGDH-228ENST00000641847 CFHR3Q02985 330 aa7.33□□□□□ -1.24
PHGDH-228ENST00000641847 NSUN5P1Q3KNT7 163 aa7.33□□□□□ -1.24
PHGDH-228ENST00000641847 C2orf83Q53S99 150 aa7.33□□□□□ -1.24
PHGDH-228ENST00000641847 TMEM14EPQ6UXP3 125 aa7.33□□□□□ -1.24
PHGDH-228ENST00000641847 STX12Q86Y82 276 aa7.33□□□□□ -1.24
PHGDH-228ENST00000641847 C11orf44Q8N8P7 122 aa7.33□□□□□ -1.24
PHGDH-228ENST00000641847 OR5T1Q8NG75 326 aa7.33□□□□□ -1.24
PHGDH-228ENST00000641847 OR11H4Q8NGC9 324 aa7.33□□□□□ -1.24
PHGDH-228ENST00000641847 OR1P1Q8NH06 330 aa7.33□□□□□ -1.24
PHGDH-228ENST00000641847 B9D2Q9BPU9 175 aa7.33□□□□□ -1.24
PHGDH-228ENST00000641847 WNT10AQ9GZT5 417 aa7.33□□□□□ -1.24
PHGDH-228ENST00000641847 ZC4H2Q9NQZ6 224 aa7.33□□□□□ -1.24
PHGDH-228ENST00000641847 SERTAD4Q9NUC0 356 aa7.33□□□□□ -1.24
PHGDH-228ENST00000641847 TNFSF18Q9UNG2 199 aa7.33□□□□□ -1.24
PHGDH-228ENST00000641847 DMRT1Q9Y5R6 373 aa7.33□□□□□ -1.24
PHGDH-228ENST00000641847 U3KQ87 197 aa7.33□□□□□ -1.24
PHGDH-228ENST00000641847 RNF222A6NCQ9 220 aa7.32□□□□□ -1.24
PHGDH-228ENST00000641847 K7EIL1 84 aa7.32□□□□□ -1.24
PHGDH-228ENST00000641847 CYB5BO43169 146 aa7.32□□□□□ -1.24
PHGDH-228ENST00000641847 SOX15O60248 233 aa7.32□□□□□ -1.24
PHGDH-228ENST00000641847 PRH1P02810 166 aa7.32□□□□□ -1.24
PHGDH-228ENST00000641847 NHLRC4P0CG21 123 aaPredicted RBP7.32□□□□□ -1.24
PHGDH-228ENST00000641847 NUP62P37198 522 aaPredicted RBP7.32□□□□□ -1.24
PHGDH-228ENST00000641847 MFAP2P55001 183 aa7.32□□□□□ -1.24
PHGDH-228ENST00000641847 ZNF546Q86UE3 836 aa7.32□□□□□ -1.24
PHGDH-228ENST00000641847 NOXA1Q86UR1 476 aa7.32□□□□□ -1.24
PHGDH-228ENST00000641847 TMEM252Q8N6L7 170 aa7.32□□□□□ -1.24
PHGDH-228ENST00000641847 INO80EQ8NBZ0 244 aaPredicted RBP7.32□□□□□ -1.24
PHGDH-228ENST00000641847 OR1L6Q8NGR2 347 aa7.32□□□□□ -1.24
PHGDH-228ENST00000641847 MISP3Q96FF7 219 aa7.32□□□□□ -1.24
PHGDH-228ENST00000641847 GON7Q9BXV9 100 aa7.32□□□□□ -1.24
PHGDH-228ENST00000641847 SLC25A31Q9H0C2 315 aa7.32□□□□□ -1.24
PHGDH-228ENST00000641847 ZNF355PQ9NSJ1 428 aa7.32□□□□□ -1.24
PHGDH-228ENST00000641847 IGLV11-55A0A075B6I3 123 aa7.31□□□□□ -1.24
PHGDH-228ENST00000641847 PSMB11A5LHX3 300 aa7.31□□□□□ -1.24
PHGDH-228ENST00000641847 HMSDA8MTL9 139 aa7.31□□□□□ -1.24
PHGDH-228ENST00000641847 BOLA2-SMG1P6H3BVE0 249 aa7.31□□□□□ -1.24
PHGDH-228ENST00000641847 CORTO00230 105 aa7.31□□□□□ -1.24
PHGDH-228ENST00000641847 CST7O76096 145 aa7.31□□□□□ -1.24
PHGDH-228ENST00000641847 IFNA4P05014 189 aa7.31□□□□□ -1.24
PHGDH-228ENST00000641847 RPL12P30050 165 aaKnown RBP7.31□□□□□ -1.24
PHGDH-228ENST00000641847 PPIFP30405 207 aaKnown RBP7.31□□□□□ -1.24
PHGDH-228ENST00000641847 SULT1A1P50225 295 aa7.31□□□□□ -1.24
PHGDH-228ENST00000641847 AP2S1P53680 142 aaPredicted RBP7.31□□□□□ -1.24
PHGDH-228ENST00000641847 ATP5IP56385 69 aaPredicted RBP7.31□□□□□ -1.24
PHGDH-228ENST00000641847 SLC35B1P78383 322 aa7.31□□□□□ -1.24
PHGDH-228ENST00000641847 DEFA5Q01523 94 aa7.31□□□□□ -1.24
PHGDH-228ENST00000641847 BAXQ07812 192 aa7.31□□□□□ -1.24
PHGDH-228ENST00000641847 PVRIGQ6DKI7 326 aa7.31□□□□□ -1.24
PHGDH-228ENST00000641847 OR8G2PQ6IF36 304 aa7.31□□□□□ -1.24
PHGDH-228ENST00000641847 SLC25A24Q6NUK1 477 aa7.31□□□□□ -1.24
PHGDH-228ENST00000641847 TMEM65Q6PI78 240 aa7.31□□□□□ -1.24
PHGDH-228ENST00000641847 ETV3LQ6ZN32 361 aa7.31□□□□□ -1.24
PHGDH-228ENST00000641847 ZNF329Q86UD4 541 aa7.31□□□□□ -1.24
PHGDH-228ENST00000641847 HAPLN4Q86UW8 402 aa7.31□□□□□ -1.24
PHGDH-228ENST00000641847 KLHDC1Q8N7A1 406 aa7.31□□□□□ -1.24
PHGDH-228ENST00000641847 PINX1Q96BK5 328 aaKnown RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms