RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 COA4Q9NYJ1 87 aa5.69□□□□□ -1.5
PHGDH-225ENST00000641720 ZNF257Q9Y2Q1 563 aa5.69□□□□□ -1.5
PHGDH-225ENST00000641720 PITX3O75364 302 aa5.68□□□□□ -1.5
PHGDH-225ENST00000641720 TRGV3P03979 118 aa5.68□□□□□ -1.5
PHGDH-225ENST00000641720 IL5P05113 134 aa5.68□□□□□ -1.5
PHGDH-225ENST00000641720 ELANEP08246 267 aa5.68□□□□□ -1.5
PHGDH-225ENST00000641720 OR13C7P0DN81 318 aa5.68□□□□□ -1.5
PHGDH-225ENST00000641720 CTRB1P17538 263 aa5.68□□□□□ -1.5
PHGDH-225ENST00000641720 HOXA1P49639 335 aaPredicted RBP5.68□□□□□ -1.5
PHGDH-225ENST00000641720 TPPP2P59282 170 aa5.68□□□□□ -1.5
PHGDH-225ENST00000641720 HSPE1P61604 102 aaKnown RBP5.68□□□□□ -1.5
PHGDH-225ENST00000641720 RHOGP84095 191 aa5.68□□□□□ -1.5
PHGDH-225ENST00000641720 SMCO1Q147U7 214 aa5.68□□□□□ -1.5
PHGDH-225ENST00000641720 ODF1Q14990 250 aa5.68□□□□□ -1.5
PHGDH-225ENST00000641720 DEFB136Q30KP8 78 aa5.68□□□□□ -1.5
PHGDH-225ENST00000641720 CXorf66Q5JRM2 361 aaPredicted RBP5.68□□□□□ -1.5
PHGDH-225ENST00000641720 CTRB2Q6GPI1 263 aa5.68□□□□□ -1.5
PHGDH-225ENST00000641720 IQCF2Q8IXL9 164 aa5.68□□□□□ -1.5
PHGDH-225ENST00000641720 TTC9CQ8N5M4 171 aa5.68□□□□□ -1.5
PHGDH-225ENST00000641720 KLHL30-AS1Q8NEE0 82 aa5.68□□□□□ -1.5
PHGDH-225ENST00000641720 COQ8AQ8NI60 647 aa5.68□□□□□ -1.5
PHGDH-225ENST00000641720 FANCD2OSQ96PS1 177 aa5.68□□□□□ -1.5
PHGDH-225ENST00000641720 OR5B12Q96R08 314 aa5.68□□□□□ -1.5
PHGDH-225ENST00000641720 PLEKHA3Q9HB20 300 aa5.68□□□□□ -1.5
PHGDH-225ENST00000641720 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.68□□□□□ -1.5
PHGDH-225ENST00000641720 ZNF355PQ9NSJ1 428 aa5.68□□□□□ -1.5
PHGDH-225ENST00000641720 FKBP11Q9NYL4 201 aa5.68□□□□□ -1.5
PHGDH-225ENST00000641720 IGLV11-55A0A075B6I3 123 aa5.67□□□□□ -1.5
PHGDH-225ENST00000641720 TRBV9A0A0B4J1U6 114 aa5.67□□□□□ -1.5
PHGDH-225ENST00000641720 A0A1B0GU03 582 aa5.67□□□□□ -1.5
PHGDH-225ENST00000641720 C7orf66A4D0T2 115 aa5.67□□□□□ -1.5
PHGDH-225ENST00000641720 H3BUA1 57 aa5.67□□□□□ -1.5
PHGDH-225ENST00000641720 OR2J3O76001 311 aa5.67□□□□□ -1.5
PHGDH-225ENST00000641720 IFNA17P01571 189 aa5.67□□□□□ -1.5
PHGDH-225ENST00000641720 IGHV3-11P01762 117 aa5.67□□□□□ -1.5
PHGDH-225ENST00000641720 CRYGCP07315 174 aa5.67□□□□□ -1.5
PHGDH-225ENST00000641720 RAB9AP51151 201 aa5.67□□□□□ -1.5
PHGDH-225ENST00000641720 SPCS3P61009 180 aa5.67□□□□□ -1.5
PHGDH-225ENST00000641720 TNFRSF9Q07011 255 aa5.67□□□□□ -1.5
PHGDH-225ENST00000641720 TATDN3Q17R31 274 aa5.67□□□□□ -1.5
PHGDH-225ENST00000641720 RGS21Q2M5E4 152 aa5.67□□□□□ -1.5
PHGDH-225ENST00000641720 THOC7Q6I9Y2 204 aaKnown RBP5.67□□□□□ -1.5
PHGDH-225ENST00000641720 TMEM65Q6PI78 240 aa5.67□□□□□ -1.5
PHGDH-225ENST00000641720 C12orf45Q8N5I9 185 aaPredicted RBP5.67□□□□□ -1.5
PHGDH-225ENST00000641720 OR2C3Q8N628 320 aa5.67□□□□□ -1.5
PHGDH-225ENST00000641720 ZNF491Q8N8L2 437 aa5.67□□□□□ -1.5
PHGDH-225ENST00000641720 OR1S1Q8NH92 325 aa5.67□□□□□ -1.5
PHGDH-225ENST00000641720 TMEM170AQ8WVE7 144 aa5.67□□□□□ -1.5
PHGDH-225ENST00000641720 OR10C1Q96KK4 312 aa5.67□□□□□ -1.5
PHGDH-225ENST00000641720 TMEM68Q96MH6 324 aa5.67□□□□□ -1.5
PHGDH-225ENST00000641720 SRSF8Q9BRL6 282 aaKnown RBP5.67□□□□□ -1.5
PHGDH-225ENST00000641720 RBKSQ9H477 322 aa5.67□□□□□ -1.5
PHGDH-225ENST00000641720 HSPB7Q9UBY9 170 aa5.67□□□□□ -1.5
PHGDH-225ENST00000641720 TMED3Q9Y3Q3 217 aa5.67□□□□□ -1.5
PHGDH-225ENST00000641720 F11RQ9Y624 299 aaKnown RBP5.67□□□□□ -1.5
PHGDH-225ENST00000641720 ALG5Q9Y673 324 aa5.67□□□□□ -1.5
PHGDH-225ENST00000641720 S4R3C0 116 aa5.67□□□□□ -1.5
PHGDH-225ENST00000641720 MFSD2BA6NFX1 497 aa5.66□□□□□ -1.5
PHGDH-225ENST00000641720 CEBPZOSA8MTT3 80 aa5.66□□□□□ -1.5
PHGDH-225ENST00000641720 SNRPGP15A8MWD9 76 aa5.66□□□□□ -1.5
PHGDH-225ENST00000641720 NUDT19A8MXV4 375 aa5.66□□□□□ -1.5
PHGDH-225ENST00000641720 FAM25EA8MYX2 175 aa5.66□□□□□ -1.5
PHGDH-225ENST00000641720 INS-IGF2F8WCM5 200 aa5.66□□□□□ -1.5
PHGDH-225ENST00000641720 I3L521 148 aa5.66□□□□□ -1.5
PHGDH-225ENST00000641720 CCL24O00175 119 aa5.66□□□□□ -1.5
PHGDH-225ENST00000641720 PRAF2O60831 178 aa5.66□□□□□ -1.5
PHGDH-225ENST00000641720 NDUFB8O95169 186 aa5.66□□□□□ -1.5
PHGDH-225ENST00000641720 BRI3O95415 125 aa5.66□□□□□ -1.5
PHGDH-225ENST00000641720 TRBV12-3P01733 135 aa5.66□□□□□ -1.5
PHGDH-225ENST00000641720 LGALS1P09382 135 aaKnown RBP5.66□□□□□ -1.5
PHGDH-225ENST00000641720 FRMD6-AS1P0C7T7 363 aa5.66□□□□□ -1.5
PHGDH-225ENST00000641720 SLC25A6P12236 298 aa5.66□□□□□ -1.5
PHGDH-225ENST00000641720 EXOSC2Q13868 293 aaKnown RBP5.66□□□□□ -1.5
PHGDH-225ENST00000641720 OXA1LQ15070 435 aa5.66□□□□□ -1.5
PHGDH-225ENST00000641720 IAH1Q2TAA2 248 aaPredicted RBP5.66□□□□□ -1.5
PHGDH-225ENST00000641720 KLK9Q2XQG4 91 aa5.66□□□□□ -1.5
PHGDH-225ENST00000641720 BSXQ3C1V8 233 aa5.66□□□□□ -1.5
PHGDH-225ENST00000641720 C9orf66Q5T8R8 295 aa5.66□□□□□ -1.5
PHGDH-225ENST00000641720 HSD17B13Q7Z5P4 300 aaPredicted RBP5.66□□□□□ -1.5
PHGDH-225ENST00000641720 ZBTB8BQ8NAP8 495 aaPredicted RBP5.66□□□□□ -1.5
PHGDH-225ENST00000641720 UXS1Q8NBZ7 420 aa5.66□□□□□ -1.5
PHGDH-225ENST00000641720 ZNF114Q8NC26 417 aa5.66□□□□□ -1.5
PHGDH-225ENST00000641720 OR4D5Q8NGN0 318 aa5.66□□□□□ -1.5
PHGDH-225ENST00000641720 OR52E5Q8NH55 327 aa5.66□□□□□ -1.5
PHGDH-225ENST00000641720 C4orf3Q8WVX3 66 aa5.66□□□□□ -1.5
PHGDH-225ENST00000641720 UBE2E2Q96LR5 201 aa5.66□□□□□ -1.5
PHGDH-225ENST00000641720 FAM210AQ96ND0 272 aa5.66□□□□□ -1.5
PHGDH-225ENST00000641720 PDCD10Q9BUL8 212 aa5.66□□□□□ -1.5
PHGDH-225ENST00000641720 MAGT1Q9H0U3 335 aa5.66□□□□□ -1.5
PHGDH-225ENST00000641720 SLA2Q9H6Q3 261 aa5.66□□□□□ -1.5
PHGDH-225ENST00000641720 GPN1Q9HCN4 374 aaPredicted RBP5.66□□□□□ -1.5
PHGDH-225ENST00000641720 ZFP57Q9NU63 452 aa5.66□□□□□ -1.5
PHGDH-225ENST00000641720 FBXL7Q9UJT9 491 aa5.66□□□□□ -1.5
PHGDH-225ENST00000641720 KLK9Q9UKQ9 250 aa5.66□□□□□ -1.5
PHGDH-225ENST00000641720 ZNF256Q9Y2P7 627 aaPredicted RBP5.66□□□□□ -1.5
PHGDH-225ENST00000641720 IGHV3-21A0A0B4J1V1 117 aa5.65□□□□□ -1.5
PHGDH-225ENST00000641720 PIGBOS1A0A0B4J2F0 54 aa5.65□□□□□ -1.5
PHGDH-225ENST00000641720 C13orf42A0A1B0GVH6 325 aa5.65□□□□□ -1.5
PHGDH-225ENST00000641720 FAM223BA6NKX1 122 aa5.65□□□□□ -1.5
PHGDH-225ENST00000641720 BOLA2-SMG1P6H3BVE0 249 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms