RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 CADM3Q8N126 398 aa12.28□□□□□ -0.44
PHGDH-213ENST00000641272 TMEM217Q8N7C4 229 aa12.28□□□□□ -0.44
PHGDH-213ENST00000641272 ZNF114Q8NC26 417 aa12.28□□□□□ -0.44
PHGDH-213ENST00000641272 OR10C1Q96KK4 312 aa12.28□□□□□ -0.44
PHGDH-213ENST00000641272 VCX3AQ9NNX9 186 aa12.28□□□□□ -0.44
PHGDH-213ENST00000641272 FBXL17Q9UF56 701 aa12.28□□□□□ -0.44
PHGDH-213ENST00000641272 KMT2AQ03164 3969 aa12.27□□□□□ -0.44
PHGDH-213ENST00000641272 TRAV14DV4A0A0A6YYC5 116 aa12.27□□□□□ -0.45
PHGDH-213ENST00000641272 MPTX1A8MV57 137 aa12.27□□□□□ -0.45
PHGDH-213ENST00000641272 DEFB4AO15263 64 aa12.27□□□□□ -0.45
PHGDH-213ENST00000641272 ST8SIA3O43173 380 aa12.27□□□□□ -0.45
PHGDH-213ENST00000641272 HPGDSO60760 199 aa12.27□□□□□ -0.45
PHGDH-213ENST00000641272 CA1P00915 261 aaPredicted RBP12.27□□□□□ -0.45
PHGDH-213ENST00000641272 APOHP02749 345 aaPredicted RBP12.27□□□□□ -0.45
PHGDH-213ENST00000641272 PGAM2P15259 253 aa12.27□□□□□ -0.45
PHGDH-213ENST00000641272 NANOS2P60321 138 aaKnown RBP12.27□□□□□ -0.45
PHGDH-213ENST00000641272 VBP1P61758 197 aa12.27□□□□□ -0.45
PHGDH-213ENST00000641272 LEMD1Q68G75 181 aa12.27□□□□□ -0.45
PHGDH-213ENST00000641272 LPCAT3Q6P1A2 487 aa12.27□□□□□ -0.45
PHGDH-213ENST00000641272 FAM24BQ8N5W8 94 aa12.27□□□□□ -0.45
PHGDH-213ENST00000641272 SLC35G3Q8N808 338 aa12.27□□□□□ -0.45
PHGDH-213ENST00000641272 CMTM3Q96MX0 182 aa12.27□□□□□ -0.45
PHGDH-213ENST00000641272 RARRES2Q99969 163 aa12.27□□□□□ -0.45
PHGDH-213ENST00000641272 CSTL1Q9H114 145 aa12.27□□□□□ -0.45
PHGDH-213ENST00000641272 IGKV1-5P01602 117 aa12.26□□□□□ -0.45
PHGDH-213ENST00000641272 ELK1P19419 428 aa12.26□□□□□ -0.45
PHGDH-213ENST00000641272 AKR1C2P52895 323 aa12.26□□□□□ -0.45
PHGDH-213ENST00000641272 PPP5CP53041 499 aa12.26□□□□□ -0.45
PHGDH-213ENST00000641272 HSPE1P61604 102 aaKnown RBP12.26□□□□□ -0.45
PHGDH-213ENST00000641272 TOMM20LQ6UXN7 152 aa12.26□□□□□ -0.45
PHGDH-213ENST00000641272 LILRB2Q8N423 598 aa12.26□□□□□ -0.45
PHGDH-213ENST00000641272 GINS3Q9BRX5 216 aa12.26□□□□□ -0.45
PHGDH-213ENST00000641272 ZFAND3Q9H8U3 227 aa12.26□□□□□ -0.45
PHGDH-213ENST00000641272 SCPEP1Q9HB40 452 aa12.26□□□□□ -0.45
PHGDH-213ENST00000641272 PUS1Q9Y606 427 aaKnown RBP eCLIP12.26□□□□□ -0.45
PHGDH-213ENST00000641272 DNAH10Q8IVF4 4471 aa12.26□□□□□ -0.45
PHGDH-213ENST00000641272 A0A087WXM4 84 aa12.25□□□□□ -0.45
PHGDH-213ENST00000641272 SMIM31A0A1B0GVY4 71 aa12.25□□□□□ -0.45
PHGDH-213ENST00000641272 DFFBO76075 338 aa12.25□□□□□ -0.45
PHGDH-213ENST00000641272 APOA1P02647 267 aa12.25□□□□□ -0.45
PHGDH-213ENST00000641272 ATF4P18848 351 aaPredicted RBP12.25□□□□□ -0.45
PHGDH-213ENST00000641272 DEFB131AP59861 70 aa12.25□□□□□ -0.45
PHGDH-213ENST00000641272 ERHP84090 104 aaKnown RBP12.25□□□□□ -0.45
PHGDH-213ENST00000641272 FAM90A2PQ658T7 463 aa12.25□□□□□ -0.45
PHGDH-213ENST00000641272 OR11H2Q8NH07 326 aa12.25□□□□□ -0.45
PHGDH-213ENST00000641272 TP53RKQ96S44 253 aa12.25□□□□□ -0.45
PHGDH-213ENST00000641272 TXN2Q99757 166 aa12.25□□□□□ -0.45
PHGDH-213ENST00000641272 FUNDC2Q9BWH2 189 aa12.25□□□□□ -0.45
PHGDH-213ENST00000641272 FAM212BQ9NTI7 297 aaPredicted RBP12.25□□□□□ -0.45
PHGDH-213ENST00000641272 FAM25AB3EWG3 89 aa12.24□□□□□ -0.45
PHGDH-213ENST00000641272 FAM25CB3EWG5 89 aa12.24□□□□□ -0.45
PHGDH-213ENST00000641272 FAM25GB3EWG6 89 aa12.24□□□□□ -0.45
PHGDH-213ENST00000641272 HOXA1P49639 335 aaPredicted RBP12.24□□□□□ -0.45
PHGDH-213ENST00000641272 UCP3P55916 312 aa12.24□□□□□ -0.45
PHGDH-213ENST00000641272 RPL11P62913 178 aaKnown RBP12.24□□□□□ -0.45
PHGDH-213ENST00000641272 MS4A6AQ9H2W1 248 aa12.24□□□□□ -0.45
PHGDH-213ENST00000641272 MRPL36Q9P0J6 103 aaKnown RBP12.24□□□□□ -0.45
PHGDH-213ENST00000641272 RABAC1Q9UI14 185 aa12.24□□□□□ -0.45
PHGDH-213ENST00000641272 A0A1B0GU03 582 aa12.23□□□□□ -0.45
PHGDH-213ENST00000641272 DNASE2O00115 360 aaPredicted RBP12.23□□□□□ -0.45
PHGDH-213ENST00000641272 IFNA17P01571 189 aa12.23□□□□□ -0.45
PHGDH-213ENST00000641272 SNCAP37840 140 aa12.23□□□□□ -0.45
PHGDH-213ENST00000641272 NPBWR1P48145 328 aa12.23□□□□□ -0.45
PHGDH-213ENST00000641272 PIGPP57054 158 aa12.23□□□□□ -0.45
PHGDH-213ENST00000641272 PAFAH1B2P68402 229 aa12.23□□□□□ -0.45
PHGDH-213ENST00000641272 TRIM16LQ309B1 348 aa12.23□□□□□ -0.45
PHGDH-213ENST00000641272 RNASE10Q5GAN6 216 aaKnown RBP12.23□□□□□ -0.45
PHGDH-213ENST00000641272 ZNF600Q6ZNG1 722 aa12.23□□□□□ -0.45
PHGDH-213ENST00000641272 DUSP18Q8NEJ0 188 aa12.23□□□□□ -0.45
PHGDH-213ENST00000641272 C11orf45Q8TAV5 145 aa12.23□□□□□ -0.45
PHGDH-213ENST00000641272 GATAD1Q8WUU5 269 aa12.23□□□□□ -0.45
PHGDH-213ENST00000641272 A0A0G2JRQ6 117 aa12.22□□□□□ -0.45
PHGDH-213ENST00000641272 TNFAIP8O95379 198 aa12.22□□□□□ -0.45
PHGDH-213ENST00000641272 CD3DP04234 171 aa12.22□□□□□ -0.45
PHGDH-213ENST00000641272 RNASE2P10153 161 aaKnown RBP12.22□□□□□ -0.45
PHGDH-213ENST00000641272 RBMS2Q15434 407 aaKnown RBP12.22□□□□□ -0.45
PHGDH-213ENST00000641272 SP6Q3SY56 376 aa12.22□□□□□ -0.45
PHGDH-213ENST00000641272 STXBP6Q8NFX7 210 aa12.22□□□□□ -0.45
PHGDH-213ENST00000641272 PDCD10Q9BUL8 212 aa12.22□□□□□ -0.45
PHGDH-213ENST00000641272 C11orf68Q9H3H3 251 aaKnown RBP12.22□□□□□ -0.45
PHGDH-213ENST00000641272 VSIRQ9H7M9 311 aa12.22□□□□□ -0.45
PHGDH-213ENST00000641272 KLK11Q9UBX7 282 aa12.22□□□□□ -0.45
PHGDH-213ENST00000641272 VPS13DQ5THJ4 4388 aa12.21□□□□□ -0.45
PHGDH-213ENST00000641272 A0A0B4J293 547 aa12.21□□□□□ -0.45
PHGDH-213ENST00000641272 P0C879 139 aa12.21□□□□□ -0.45
PHGDH-213ENST00000641272 OPRK1P41145 380 aa12.21□□□□□ -0.45
PHGDH-213ENST00000641272 ETV6P41212 452 aa12.21□□□□□ -0.45
PHGDH-213ENST00000641272 RND3P61587 244 aa12.21□□□□□ -0.45
PHGDH-213ENST00000641272 LHFPL1Q86WI0 220 aa12.21□□□□□ -0.45
PHGDH-213ENST00000641272 OR4D10Q8NGI6 311 aa12.21□□□□□ -0.45
PHGDH-213ENST00000641272 OR52I2Q8NH67 350 aa12.21□□□□□ -0.45
PHGDH-213ENST00000641272 RNASE11Q8TAA1 199 aaKnown RBP12.21□□□□□ -0.45
PHGDH-213ENST00000641272 FNDC4Q9H6D8 234 aaPredicted RBP12.21□□□□□ -0.45
PHGDH-213ENST00000641272 AGRNO00468 2067 aa12.21□□□□□ -0.45
PHGDH-213ENST00000641272 C3orf85A0A1B0GTC6 90 aa12.2□□□□□ -0.46
PHGDH-213ENST00000641272 TMEM50AO95807 157 aa12.2□□□□□ -0.46
PHGDH-213ENST00000641272 CMC4P56277 68 aaPredicted RBP12.2□□□□□ -0.46
PHGDH-213ENST00000641272 TMEM187Q14656 261 aa12.2□□□□□ -0.46
PHGDH-213ENST00000641272 SCGB2B2Q4G0G5 96 aa12.2□□□□□ -0.46
PHGDH-213ENST00000641272 NAA50Q9GZZ1 169 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms