RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 UBE2MP61081 183 aaKnown RBP20.32■□□□□ 0.84
VEGFA-231ENST00000640499 GPHB5Q86YW7 130 aa20.32■□□□□ 0.84
VEGFA-231ENST00000640499 PDCD10Q9BUL8 212 aa20.32■□□□□ 0.84
VEGFA-231ENST00000640499 TBC1D24Q9ULP9 559 aa20.32■□□□□ 0.84
VEGFA-231ENST00000640499 C9orf170A2RU37 121 aa20.31■□□□□ 0.84
VEGFA-231ENST00000640499 NXPH3O95157 252 aa20.31■□□□□ 0.84
VEGFA-231ENST00000640499 ANXA7P20073 488 aaKnown RBP20.31■□□□□ 0.84
VEGFA-231ENST00000640499 IFITM3Q01628 133 aa20.31■□□□□ 0.84
VEGFA-231ENST00000640499 MISP3Q96FF7 219 aa20.31■□□□□ 0.84
VEGFA-231ENST00000640499 C21orf62Q9NYP8 219 aa20.31■□□□□ 0.84
VEGFA-231ENST00000640499 PITX3O75364 302 aa20.3■□□□□ 0.84
VEGFA-231ENST00000640499 IGHV3-48P01763 117 aa20.3■□□□□ 0.84
VEGFA-231ENST00000640499 HOXA1P49639 335 aaPredicted RBP20.3■□□□□ 0.84
VEGFA-231ENST00000640499 SMCO1Q147U7 214 aa20.3■□□□□ 0.84
VEGFA-231ENST00000640499 OR4C12Q96R67 309 aa20.3■□□□□ 0.84
VEGFA-231ENST00000640499 ELOVL1Q9BW60 279 aa20.3■□□□□ 0.84
VEGFA-231ENST00000640499 DUXBA0A1W2PPF3 345 aa20.29■□□□□ 0.84
VEGFA-231ENST00000640499 OR2T8A6NH00 312 aa20.29■□□□□ 0.84
VEGFA-231ENST00000640499 MT-CO2P00403 227 aa20.29■□□□□ 0.84
VEGFA-231ENST00000640499 IGLV1-51P01701 117 aa20.29■□□□□ 0.84
VEGFA-231ENST00000640499 OR4E1P0C645 316 aa20.29■□□□□ 0.84
VEGFA-231ENST00000640499 ADMP35318 185 aa20.29■□□□□ 0.84
VEGFA-231ENST00000640499 TATDN3Q17R31 274 aa20.29■□□□□ 0.84
VEGFA-231ENST00000640499 TMEM170AQ8WVE7 144 aa20.29■□□□□ 0.84
VEGFA-231ENST00000640499 PRR25Q96S07 402 aa20.29■□□□□ 0.84
VEGFA-231ENST00000640499 CHRDL1Q9BU40 450 aa20.29■□□□□ 0.84
VEGFA-231ENST00000640499 SORL1Q92673 2214 aa20.29■□□□□ 0.84
VEGFA-231ENST00000640499 LGALS9O00182 355 aa20.28■□□□□ 0.84
VEGFA-231ENST00000640499 TGOLN2O43493 480 aa20.28■□□□□ 0.84
VEGFA-231ENST00000640499 SNCAP37840 140 aa20.28■□□□□ 0.84
VEGFA-231ENST00000640499 DHRS2Q13268 280 aa20.28■□□□□ 0.84
VEGFA-231ENST00000640499 UNQ9165/PRO28630Q6UXU0 137 aa20.28■□□□□ 0.84
VEGFA-231ENST00000640499 MRAPQ8TCY5 172 aa20.28■□□□□ 0.84
VEGFA-231ENST00000640499 SIGLEC8Q9NYZ4 499 aa20.28■□□□□ 0.84
VEGFA-231ENST00000640499 HSPB7Q9UBY9 170 aa20.28■□□□□ 0.84
VEGFA-231ENST00000640499 IGHV3-35A0A0C4DH35 117 aa20.27■□□□□ 0.84
VEGFA-231ENST00000640499 A0A1B0GU03 582 aa20.27■□□□□ 0.84
VEGFA-231ENST00000640499 SPNP16150 400 aa20.27■□□□□ 0.84
VEGFA-231ENST00000640499 ZNF846Q147U1 533 aa20.27■□□□□ 0.84
VEGFA-231ENST00000640499 MLANAQ16655 118 aa20.27■□□□□ 0.84
VEGFA-231ENST00000640499 ATP6V0BQ99437 205 aa20.27■□□□□ 0.84
VEGFA-231ENST00000640499 WDR12Q9GZL7 423 aaKnown RBP20.27■□□□□ 0.84
VEGFA-231ENST00000640499 DNAH9Q9NYC9 4486 aa20.26■□□□□ 0.83
VEGFA-231ENST00000640499 TGP01266 2768 aa20.26■□□□□ 0.83
VEGFA-231ENST00000640499 TCRBP04435 133 aa20.26■□□□□ 0.83
VEGFA-231ENST00000640499 CTSGP08311 255 aa20.26■□□□□ 0.83
VEGFA-231ENST00000640499 TNFRSF9Q07011 255 aa20.26■□□□□ 0.83
VEGFA-231ENST00000640499 PLET1Q6UQ28 207 aa20.26■□□□□ 0.83
VEGFA-231ENST00000640499 LYG2Q86SG7 212 aa20.26■□□□□ 0.83
VEGFA-231ENST00000640499 PINX1Q96BK5 328 aaKnown RBP20.26■□□□□ 0.83
VEGFA-231ENST00000640499 ZNF436Q9C0F3 470 aaPredicted RBP20.26■□□□□ 0.83
VEGFA-231ENST00000640499 C20orf85Q9H1P6 137 aa20.26■□□□□ 0.83
VEGFA-231ENST00000640499 FNDC4Q9H6D8 234 aaPredicted RBP20.26■□□□□ 0.83
VEGFA-231ENST00000640499 ENY2Q9NPA8 101 aa20.26■□□□□ 0.83
VEGFA-231ENST00000640499 MRPL36Q9P0J6 103 aaKnown RBP20.26■□□□□ 0.83
VEGFA-231ENST00000640499 ZNF256Q9Y2P7 627 aaPredicted RBP20.26■□□□□ 0.83
VEGFA-231ENST00000640499 C2orf70A6NJV1 201 aa20.25■□□□□ 0.83
VEGFA-231ENST00000640499 UPK1BO75841 260 aa20.25■□□□□ 0.83
VEGFA-231ENST00000640499 HOXB5P09067 269 aa20.25■□□□□ 0.83
VEGFA-231ENST00000640499 FCGR2BP31994 310 aaPredicted RBP20.25■□□□□ 0.83
VEGFA-231ENST00000640499 GGNBP1Q5YKI7 109 aa20.25■□□□□ 0.83
VEGFA-231ENST00000640499 BSCL2Q96G97 398 aaPredicted RBP20.25■□□□□ 0.83
VEGFA-231ENST00000640499 RBKSQ9H477 322 aa20.25■□□□□ 0.83
VEGFA-231ENST00000640499 PEMTQ9UBM1 199 aa20.25■□□□□ 0.83
VEGFA-231ENST00000640499 ZMAT5Q9UDW3 170 aaKnown RBP20.25■□□□□ 0.83
VEGFA-231ENST00000640499 TMEM213A2RRL7 107 aa20.24■□□□□ 0.83
VEGFA-231ENST00000640499 CEBPZOSA8MTT3 80 aa20.24■□□□□ 0.83
VEGFA-231ENST00000640499 SLC25A6P12236 298 aa20.24■□□□□ 0.83
VEGFA-231ENST00000640499 ASAH1Q13510 395 aa20.24■□□□□ 0.83
VEGFA-231ENST00000640499 OR52B4Q8NGK2 314 aa20.24■□□□□ 0.83
VEGFA-231ENST00000640499 HEYLQ9NQ87 328 aaPredicted RBP20.24■□□□□ 0.83
VEGFA-231ENST00000640499 TMED3Q9Y3Q3 217 aa20.24■□□□□ 0.83
VEGFA-231ENST00000640499 ADAP1O75689 374 aa20.23■□□□□ 0.83
VEGFA-231ENST00000640499 MFAP4P55083 255 aa20.23■□□□□ 0.83
VEGFA-231ENST00000640499 UBAC2Q8NBM4 344 aa20.23■□□□□ 0.83
VEGFA-231ENST00000640499 LSM4Q9Y4Z0 139 aaKnown RBP20.23■□□□□ 0.83
VEGFA-231ENST00000640499 TRAV6A0A075B6T7 132 aa20.22■□□□□ 0.83
VEGFA-231ENST00000640499 PIGBOS1A0A0B4J2F0 54 aa20.22■□□□□ 0.83
VEGFA-231ENST00000640499 ZNF320A2RRD8 509 aa20.22■□□□□ 0.83
VEGFA-231ENST00000640499 IZUMO1RA6ND01 250 aa20.22■□□□□ 0.83
VEGFA-231ENST00000640499 MPTX1A8MV57 137 aa20.22■□□□□ 0.83
VEGFA-231ENST00000640499 A8MWP6 167 aa20.22■□□□□ 0.83
VEGFA-231ENST00000640499 FOLR2P14207 255 aa20.22■□□□□ 0.83
VEGFA-231ENST00000640499 HTR2BP41595 481 aa20.22■□□□□ 0.83
VEGFA-231ENST00000640499 SUB1P53999 127 aaKnown RBP eCLIP20.22■□□□□ 0.83
VEGFA-231ENST00000640499 FAM106AQ4KMX7 169 aa20.22■□□□□ 0.83
VEGFA-231ENST00000640499 C2orf83Q53S99 150 aa20.22■□□□□ 0.83
VEGFA-231ENST00000640499 Q56UQ5 140 aa20.22■□□□□ 0.83
VEGFA-231ENST00000640499 OR1S1Q8NH92 325 aa20.22■□□□□ 0.83
VEGFA-231ENST00000640499 CACNG8Q8WXS5 425 aa20.22■□□□□ 0.83
VEGFA-231ENST00000640499 TXN2Q99757 166 aa20.22■□□□□ 0.83
VEGFA-231ENST00000640499 C4orf46Q504U0 113 aa20.21■□□□□ 0.83
VEGFA-231ENST00000640499 TM4SF20Q53R12 229 aa20.21■□□□□ 0.83
VEGFA-231ENST00000640499 SPSB3Q6PJ21 355 aa20.21■□□□□ 0.83
VEGFA-231ENST00000640499 SLC24A4Q8NFF2 622 aa20.21■□□□□ 0.83
VEGFA-231ENST00000640499 NUDT15Q9NV35 164 aa20.21■□□□□ 0.83
VEGFA-231ENST00000640499 CACFD1Q9UGQ2 172 aa20.21■□□□□ 0.83
VEGFA-231ENST00000640499 GP9P14770 177 aa20.2■□□□□ 0.82
VEGFA-231ENST00000640499 CBLN1P23435 193 aa20.2■□□□□ 0.82
VEGFA-231ENST00000640499 DTD1Q8TEA8 209 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms