RNA–Protein interactions for RNA: ENST00000640287.1

PAX6-268, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 1,485 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-268ENST00000640287 C7orf66A4D0T2 115 aa11.77□□□□□ -0.52
PAX6-268ENST00000640287 MFSD2BA6NFX1 497 aa11.77□□□□□ -0.52
PAX6-268ENST00000640287 SYNGR2O43760 224 aa11.77□□□□□ -0.52
PAX6-268ENST00000640287 SSSCA1O60232 199 aa11.77□□□□□ -0.52
PAX6-268ENST00000640287 RNASE2P10153 161 aaKnown RBP11.77□□□□□ -0.52
PAX6-268ENST00000640287 POLR2GP62487 172 aaKnown RBP eCLIP11.77□□□□□ -0.52
PAX6-268ENST00000640287 RUNX1Q01196 453 aa11.77□□□□□ -0.52
PAX6-268ENST00000640287 C11orf87Q6NUJ2 197 aa11.77□□□□□ -0.52
PAX6-268ENST00000640287 OR1N2Q8NGR9 330 aa11.77□□□□□ -0.52
PAX6-268ENST00000640287 CIB3Q96Q77 187 aaPredicted RBP11.77□□□□□ -0.52
PAX6-268ENST00000640287 PAIP2BQ9ULR5 123 aaKnown RBP11.77□□□□□ -0.52
PAX6-268ENST00000640287 U3KQ87 197 aa11.77□□□□□ -0.52
PAX6-268ENST00000640287 CORTO00230 105 aa11.76□□□□□ -0.53
PAX6-268ENST00000640287 NPY1RP25929 384 aa11.76□□□□□ -0.53
PAX6-268ENST00000640287 MYCNOSP40205 109 aa11.76□□□□□ -0.53
PAX6-268ENST00000640287 ID3Q02535 119 aa11.76□□□□□ -0.53
PAX6-268ENST00000640287 ZNF616Q08AN1 781 aa11.76□□□□□ -0.53
PAX6-268ENST00000640287 KLK9Q2XQG4 91 aa11.76□□□□□ -0.53
PAX6-268ENST00000640287 ZNF343Q6P1L6 599 aa11.76□□□□□ -0.53
PAX6-268ENST00000640287 NOXA1Q86UR1 476 aa11.76□□□□□ -0.53
PAX6-268ENST00000640287 UBAC2Q8NBM4 344 aa11.76□□□□□ -0.53
PAX6-268ENST00000640287 C2orf50Q96LR7 162 aa11.76□□□□□ -0.53
PAX6-268ENST00000640287 RANGRFQ9HD47 186 aaPredicted RBP11.76□□□□□ -0.53
PAX6-268ENST00000640287 PEF1Q9UBV8 284 aaKnown RBP11.76□□□□□ -0.53
PAX6-268ENST00000640287 KLK9Q9UKQ9 250 aa11.76□□□□□ -0.53
PAX6-268ENST00000640287 IGHV4OR15-8A0A075B7B6 117 aa11.76□□□□□ -0.53
PAX6-268ENST00000640287 A0A087WW49 117 aa11.76□□□□□ -0.53
PAX6-268ENST00000640287 LINC01619G3V211 115 aa11.76□□□□□ -0.53
PAX6-268ENST00000640287 SIX6O95475 246 aa11.76□□□□□ -0.53
PAX6-268ENST00000640287 MT-CO2P00403 227 aa11.76□□□□□ -0.53
PAX6-268ENST00000640287 HSPB1P04792 205 aaKnown RBP11.76□□□□□ -0.53
PAX6-268ENST00000640287 OPRK1P41145 380 aa11.76□□□□□ -0.53
PAX6-268ENST00000640287 S100A10P60903 97 aa11.76□□□□□ -0.53
PAX6-268ENST00000640287 RPP30P78346 268 aaKnown RBP11.76□□□□□ -0.53
PAX6-268ENST00000640287 CLEC19AQ6UXS0 136 aa11.76□□□□□ -0.53
PAX6-268ENST00000640287 VN1R17PQ8TDU5 208 aa11.76□□□□□ -0.53
PAX6-268ENST00000640287 MGAT4CQ9UBM8 478 aa11.76□□□□□ -0.53
PAX6-268ENST00000640287 LSM5Q9Y4Y9 91 aaKnown RBP11.76□□□□□ -0.53
PAX6-268ENST00000640287 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.75□□□□□ -0.53
PAX6-268ENST00000640287 TRBV7-1A0A0A6YYK4 115 aa11.75□□□□□ -0.53
PAX6-268ENST00000640287 TRBV12-3P01733 135 aa11.75□□□□□ -0.53
PAX6-268ENST00000640287 MBPP02686 304 aaPredicted RBP11.75□□□□□ -0.53
PAX6-268ENST00000640287 IFNA4P05014 189 aa11.75□□□□□ -0.53
PAX6-268ENST00000640287 OR8U8P0C7N1 319 aa11.75□□□□□ -0.53
PAX6-268ENST00000640287 BSXQ3C1V8 233 aa11.75□□□□□ -0.53
PAX6-268ENST00000640287 C2orf83Q53S99 150 aa11.75□□□□□ -0.53
PAX6-268ENST00000640287 FAM209BQ5JX69 171 aa11.75□□□□□ -0.53
PAX6-268ENST00000640287 ETV3LQ6ZN32 361 aa11.75□□□□□ -0.53
PAX6-268ENST00000640287 SCARB1Q8WTV0 552 aa11.75□□□□□ -0.53
PAX6-268ENST00000640287 MED28Q9H204 178 aa11.75□□□□□ -0.53
PAX6-268ENST00000640287 C21orf62Q9NYP8 219 aa11.75□□□□□ -0.53
PAX6-268ENST00000640287 H3BP45 60 aa11.74□□□□□ -0.53
PAX6-268ENST00000640287 K7EIM0 57 aa11.74□□□□□ -0.53
PAX6-268ENST00000640287 LY86O95711 162 aa11.74□□□□□ -0.53
PAX6-268ENST00000640287 IGHV3-48P01763 117 aa11.74□□□□□ -0.53
PAX6-268ENST00000640287 GPR183P32249 361 aa11.74□□□□□ -0.53
PAX6-268ENST00000640287 RAB11AP62491 216 aa11.74□□□□□ -0.53
PAX6-268ENST00000640287 Q56UQ5 140 aa11.74□□□□□ -0.53
PAX6-268ENST00000640287 PRR31Q5SQ13 230 aa11.74□□□□□ -0.53
PAX6-268ENST00000640287 ZNF502Q8TBZ5 544 aa11.74□□□□□ -0.53
PAX6-268ENST00000640287 CCDC140Q96MF4 163 aa11.74□□□□□ -0.53
PAX6-268ENST00000640287 RCL1Q9Y2P8 373 aaKnown RBP11.74□□□□□ -0.53
PAX6-268ENST00000640287 VWFP04275 2813 aa11.73□□□□□ -0.53
PAX6-268ENST00000640287 WNK1Q9H4A3 2382 aa11.73□□□□□ -0.53
PAX6-268ENST00000640287 PPP5D1E7EU14 171 aa11.73□□□□□ -0.53
PAX6-268ENST00000640287 I3L2K1 104 aa11.73□□□□□ -0.53
PAX6-268ENST00000640287 L7N2F9 121 aa11.73□□□□□ -0.53
PAX6-268ENST00000640287 CLEC3BP05452 202 aa11.73□□□□□ -0.53
PAX6-268ENST00000640287 CD33P20138 364 aa11.73□□□□□ -0.53
PAX6-268ENST00000640287 ZP3P21754 424 aa11.73□□□□□ -0.53
PAX6-268ENST00000640287 ARL3P36405 182 aa11.73□□□□□ -0.53
PAX6-268ENST00000640287 SLURP1P55000 103 aa11.73□□□□□ -0.53
PAX6-268ENST00000640287 ATP5IP56385 69 aaPredicted RBP11.73□□□□□ -0.53
PAX6-268ENST00000640287 VAMP2P63027 116 aa11.73□□□□□ -0.53
PAX6-268ENST00000640287 FHL3Q13643 280 aa11.73□□□□□ -0.53
PAX6-268ENST00000640287 RPEL1Q2QD12 228 aa11.73□□□□□ -0.53
PAX6-268ENST00000640287 SPANXN5Q5MJ07 72 aa11.73□□□□□ -0.53
PAX6-268ENST00000640287 ACSM6Q6P461 480 aa11.73□□□□□ -0.53
PAX6-268ENST00000640287 TREML4Q6UXN2 200 aa11.73□□□□□ -0.53
PAX6-268ENST00000640287 RNASEH2CQ8TDP1 164 aaKnown RBP11.73□□□□□ -0.53
PAX6-268ENST00000640287 ZC4H2Q9NQZ6 224 aa11.73□□□□□ -0.53
PAX6-268ENST00000640287 PSENENQ9NZ42 101 aa11.73□□□□□ -0.53
PAX6-268ENST00000640287 RPS10-NUDT3A0A1W2PQS6 291 aa11.72□□□□□ -0.53
PAX6-268ENST00000640287 OR2T8A6NH00 312 aa11.72□□□□□ -0.53
PAX6-268ENST00000640287 HOXD3P31249 432 aaPredicted RBP11.72□□□□□ -0.53
PAX6-268ENST00000640287 CYCSP99999 105 aaKnown RBP11.72□□□□□ -0.53
PAX6-268ENST00000640287 TMEM170AQ8WVE7 144 aa11.72□□□□□ -0.53
PAX6-268ENST00000640287 RAB40CQ96S21 281 aa11.72□□□□□ -0.53
PAX6-268ENST00000640287 STRAPQ9Y3F4 350 aaKnown RBP11.72□□□□□ -0.53
PAX6-268ENST00000640287 K7EPK0 472 aa11.71□□□□□ -0.53
PAX6-268ENST00000640287 PVALBP20472 110 aaPredicted RBP11.71□□□□□ -0.53
PAX6-268ENST00000640287 MFAP4P55083 255 aa11.71□□□□□ -0.53
PAX6-268ENST00000640287 H2BFSP57053 126 aa11.71□□□□□ -0.53
PAX6-268ENST00000640287 RAB32Q13637 225 aa11.71□□□□□ -0.53
PAX6-268ENST00000640287 LRRC37A5PQ49AS3 106 aa11.71□□□□□ -0.53
PAX6-268ENST00000640287 PVRIGQ6DKI7 326 aa11.71□□□□□ -0.53
PAX6-268ENST00000640287 ETFRF1Q6IPR1 90 aa11.71□□□□□ -0.53
PAX6-268ENST00000640287 LINC00482Q8N8I6 264 aa11.71□□□□□ -0.53
PAX6-268ENST00000640287 OR4C12Q96R67 309 aa11.71□□□□□ -0.53
PAX6-268ENST00000640287 NMES1Q9C002 83 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms