RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-208ENST00000640135 IGFBP2P18065 325 aa9.15□□□□□ -0.94
SCN1B-208ENST00000640135 SRSF9Q13242 221 aaKnown RBP eCLIP9.15□□□□□ -0.94
SCN1B-208ENST00000640135 LDLRAD2Q5SZI1 272 aa9.15□□□□□ -0.94
SCN1B-208ENST00000640135 STHQ8IWL8 128 aa9.15□□□□□ -0.94
SCN1B-208ENST00000640135 CIARTQ8N365 385 aaPredicted RBP9.15□□□□□ -0.94
SCN1B-208ENST00000640135 PAQR4Q8N4S7 273 aaPredicted RBP9.15□□□□□ -0.94
SCN1B-208ENST00000640135 ARL6IP6Q8N6S5 226 aa9.15□□□□□ -0.94
SCN1B-208ENST00000640135 AURKAIP1Q9NWT8 199 aaPredicted RBP9.15□□□□□ -0.94
SCN1B-208ENST00000640135 MUC6Q6W4X9 2439 aa9.15□□□□□ -0.95
SCN1B-208ENST00000640135 IGHV3OR16-13A0A075B7E8 117 aa9.15□□□□□ -0.95
SCN1B-208ENST00000640135 IGHV3-74A0A0B4J1X5 117 aa9.15□□□□□ -0.95
SCN1B-208ENST00000640135 A0A1W2PRX2 142 aa9.15□□□□□ -0.95
SCN1B-208ENST00000640135 C1QL1O75973 258 aa9.15□□□□□ -0.95
SCN1B-208ENST00000640135 ZNF56Q15929 161 aa9.15□□□□□ -0.95
SCN1B-208ENST00000640135 ZNF324BQ6AW86 544 aaPredicted RBP9.15□□□□□ -0.95
SCN1B-208ENST00000640135 A0A1B0GW15 77 aa9.14□□□□□ -0.95
SCN1B-208ENST00000640135 LEPP41159 167 aa9.14□□□□□ -0.95
SCN1B-208ENST00000640135 CD81P60033 236 aa9.14□□□□□ -0.95
SCN1B-208ENST00000640135 OR1P1Q8NH06 330 aa9.14□□□□□ -0.95
SCN1B-208ENST00000640135 RNF125Q96EQ8 232 aa9.14□□□□□ -0.95
SCN1B-208ENST00000640135 GGCTO75223 188 aaKnown RBP9.14□□□□□ -0.95
SCN1B-208ENST00000640135 NMBP08949 121 aa9.14□□□□□ -0.95
SCN1B-208ENST00000640135 PRTN3P24158 256 aa9.14□□□□□ -0.95
SCN1B-208ENST00000640135 TCF15Q12870 199 aa9.14□□□□□ -0.95
SCN1B-208ENST00000640135 ZNF841Q6ZN19 808 aa9.14□□□□□ -0.95
SCN1B-208ENST00000640135 DUX3Q96PT4 197 aa9.14□□□□□ -0.95
SCN1B-208ENST00000640135 TMEM70Q9BUB7 260 aa9.14□□□□□ -0.95
SCN1B-208ENST00000640135 MPTX1A8MV57 137 aa9.14□□□□□ -0.95
SCN1B-208ENST00000640135 F12P00748 615 aaPredicted RBP9.14□□□□□ -0.95
SCN1B-208ENST00000640135 FMC1Q96HJ9 113 aa9.14□□□□□ -0.95
SCN1B-208ENST00000640135 M0R3E3 92 aa9.14□□□□□ -0.95
SCN1B-208ENST00000640135 IGHV3-23P01764 117 aa9.14□□□□□ -0.95
SCN1B-208ENST00000640135 TAS2R60P59551 318 aa9.14□□□□□ -0.95
SCN1B-208ENST00000640135 SNRPEP62304 92 aaKnown RBP9.14□□□□□ -0.95
SCN1B-208ENST00000640135 PAX8Q06710 450 aa9.14□□□□□ -0.95
SCN1B-208ENST00000640135 OR8A1Q8NGG7 326 aa9.14□□□□□ -0.95
SCN1B-208ENST00000640135 ISOC2Q96AB3 205 aa9.14□□□□□ -0.95
SCN1B-208ENST00000640135 USMG5Q96IX5 58 aa9.14□□□□□ -0.95
SCN1B-208ENST00000640135 ASCL2Q99929 193 aa9.14□□□□□ -0.95
SCN1B-208ENST00000640135 E7EQL1 145 aa9.13□□□□□ -0.95
SCN1B-208ENST00000640135 MYO7BQ6PIF6 2116 aa9.13□□□□□ -0.95
SCN1B-208ENST00000640135 SDF2L1Q9HCN8 221 aa9.13□□□□□ -0.95
SCN1B-208ENST00000640135 PNRC2Q9NPJ4 139 aaKnown RBP9.13□□□□□ -0.95
SCN1B-208ENST00000640135 OTORQ9NRC9 128 aa9.13□□□□□ -0.95
SCN1B-208ENST00000640135 SOX21Q9Y651 276 aaPredicted RBP9.13□□□□□ -0.95
SCN1B-208ENST00000640135 HEATR5BQ9P2D3 2071 aa9.13□□□□□ -0.95
SCN1B-208ENST00000640135 ZNF207O43670 478 aaKnown RBP9.13□□□□□ -0.95
SCN1B-208ENST00000640135 IGKV3-20P01619 116 aa9.13□□□□□ -0.95
SCN1B-208ENST00000640135 RPL29P47914 159 aaKnown RBP9.13□□□□□ -0.95
SCN1B-208ENST00000640135 PRSS8Q16651 343 aa9.13□□□□□ -0.95
SCN1B-208ENST00000640135 SLC25A48Q6ZT89 311 aaKnown RBP9.13□□□□□ -0.95
SCN1B-208ENST00000640135 RCC1LQ96I51 464 aaKnown RBP9.13□□□□□ -0.95
SCN1B-208ENST00000640135 LINC01587Q99440 93 aa9.13□□□□□ -0.95
SCN1B-208ENST00000640135 IGHV1-3A0A0C4DH29 117 aa9.13□□□□□ -0.95
SCN1B-208ENST00000640135 IGKV1-12A0A0C4DH73 117 aa9.13□□□□□ -0.95
SCN1B-208ENST00000640135 IGKV1D-12P01611 117 aa9.13□□□□□ -0.95
SCN1B-208ENST00000640135 BTF3P20290 206 aaKnown RBP9.13□□□□□ -0.95
SCN1B-208ENST00000640135 TNFRSF18Q9Y5U5 241 aa9.13□□□□□ -0.95
SCN1B-208ENST00000640135 IGKV1D-13A0A0B4J2D9 117 aa9.12□□□□□ -0.95
SCN1B-208ENST00000640135 PRR32B1ATL7 298 aa9.12□□□□□ -0.95
SCN1B-208ENST00000640135 NUDT3O95989 172 aa9.12□□□□□ -0.95
SCN1B-208ENST00000640135 MSMBP08118 114 aa9.12□□□□□ -0.95
SCN1B-208ENST00000640135 IGKV1-13P0DP09 117 aa9.12□□□□□ -0.95
SCN1B-208ENST00000640135 AGAP20933 346 aa9.12□□□□□ -0.95
SCN1B-208ENST00000640135 OR1N2Q8NGR9 330 aa9.12□□□□□ -0.95
SCN1B-208ENST00000640135 PGLYRP4Q96LB8 373 aa9.12□□□□□ -0.95
SCN1B-208ENST00000640135 BPESC1Q9GZL8 116 aa9.12□□□□□ -0.95
SCN1B-208ENST00000640135 IGHV3-49A0A0A0MS15 119 aa9.12□□□□□ -0.95
SCN1B-208ENST00000640135 TEX38Q6PEX7 206 aa9.12□□□□□ -0.95
SCN1B-208ENST00000640135 LRTM2Q8N967 370 aa9.12□□□□□ -0.95
SCN1B-208ENST00000640135 TMEM101Q96IK0 257 aa9.12□□□□□ -0.95
SCN1B-208ENST00000640135 H3BUX3 64 aa9.12□□□□□ -0.95
SCN1B-208ENST00000640135 J3QLI3 93 aa9.12□□□□□ -0.95
SCN1B-208ENST00000640135 PEX7O00628 323 aa9.12□□□□□ -0.95
SCN1B-208ENST00000640135 ITGB1BP1O14713 200 aa9.12□□□□□ -0.95
SCN1B-208ENST00000640135 C18orf12Q96KH6 178 aa9.12□□□□□ -0.95
SCN1B-208ENST00000640135 PARLQ9H300 379 aa9.12□□□□□ -0.95
SCN1B-208ENST00000640135 ROS1P08922 2347 aa9.12□□□□□ -0.95
SCN1B-208ENST00000640135 ZNF506Q5JVG8 444 aa9.12□□□□□ -0.95
SCN1B-208ENST00000640135 SDHCQ99643 169 aaPredicted RBP9.12□□□□□ -0.95
SCN1B-208ENST00000640135 SRSF8Q9BRL6 282 aaKnown RBP9.12□□□□□ -0.95
SCN1B-208ENST00000640135 CBY3A6NI87 242 aa9.11□□□□□ -0.95
SCN1B-208ENST00000640135 CIRBPQ14011 172 aaKnown RBP9.11□□□□□ -0.95
SCN1B-208ENST00000640135 FAM74A4Q5TZK3 123 aa9.11□□□□□ -0.95
SCN1B-208ENST00000640135 GAFA1Q96PS6 74 aa9.11□□□□□ -0.95
SCN1B-208ENST00000640135 DMRTA2Q96SC8 542 aa9.11□□□□□ -0.95
SCN1B-208ENST00000640135 CLDN16Q9Y5I7 305 aa9.11□□□□□ -0.95
SCN1B-208ENST00000640135 H3BTX0 84 aa9.11□□□□□ -0.95
SCN1B-208ENST00000640135 OVOL1O14753 267 aa9.11□□□□□ -0.95
SCN1B-208ENST00000640135 ZNF324O75467 553 aaPredicted RBP9.11□□□□□ -0.95
SCN1B-208ENST00000640135 NAPSAO96009 420 aa9.11□□□□□ -0.95
SCN1B-208ENST00000640135 PSMB2P49721 201 aa9.11□□□□□ -0.95
SCN1B-208ENST00000640135 EFNB3Q15768 340 aa9.11□□□□□ -0.95
SCN1B-208ENST00000640135 C5orf64Q2M2E5 130 aa9.11□□□□□ -0.95
SCN1B-208ENST00000640135 Q5PR19 223 aa9.11□□□□□ -0.95
SCN1B-208ENST00000640135 ARTNQ5T4W7 220 aa9.11□□□□□ -0.95
SCN1B-208ENST00000640135 CD177Q8N6Q3 437 aa9.11□□□□□ -0.95
SCN1B-208ENST00000640135 ZNF525Q8N782 197 aa9.11□□□□□ -0.95
SCN1B-208ENST00000640135 NCOR1P1Q9H4R4 102 aa9.11□□□□□ -0.95
SCN1B-208ENST00000640135 TCF20Q9UGU0 1960 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms