RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 ANK3Q12955 4377 aaKnown RBP-0.1□□□□□ -2.43
CCDC7-211ENST00000638889 TET1Q8NFU7 2136 aa-0.1□□□□□ -2.43
CCDC7-211ENST00000638889 DNAH3Q8TD57 4116 aa-0.1□□□□□ -2.43
CCDC7-211ENST00000638889 DNAH5Q8TE73 4624 aa-0.1□□□□□ -2.43
CCDC7-211ENST00000638889 PEAK1Q9H792 1746 aa-0.1□□□□□ -2.43
CCDC7-211ENST00000638889 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.1□□□□□ -2.43
CCDC7-211ENST00000638889 CSPG4Q6UVK1 2322 aa-0.1□□□□□ -2.43
CCDC7-211ENST00000638889 PLCE1Q9P212 2302 aa-0.1□□□□□ -2.43
CCDC7-211ENST00000638889 TGP01266 2768 aa-0.11□□□□□ -2.43
CCDC7-211ENST00000638889 ANAPC1Q9H1A4 1944 aa-0.11□□□□□ -2.43
CCDC7-211ENST00000638889 CMYA5Q8N3K9 4069 aa-0.11□□□□□ -2.43
CCDC7-211ENST00000638889 PI4KAP42356 2102 aa-0.11□□□□□ -2.43
CCDC7-211ENST00000638889 VWFP04275 2813 aa-0.11□□□□□ -2.43
CCDC7-211ENST00000638889 MXRA5Q9NR99 2828 aa-0.11□□□□□ -2.43
CCDC7-211ENST00000638889 EML6Q6ZMW3 1958 aa-0.11□□□□□ -2.43
CCDC7-211ENST00000638889 DNAH11Q96DT5 4516 aa-0.11□□□□□ -2.43
CCDC7-211ENST00000638889 ZNF879B4DU55 563 aa-0.11□□□□□ -2.43
CCDC7-211ENST00000638889 C10orf142B7Z368 130 aa-0.11□□□□□ -2.43
CCDC7-211ENST00000638889 YEATS4O95619 227 aa-0.11□□□□□ -2.43
CCDC7-211ENST00000638889 CCL1P22362 96 aa-0.11□□□□□ -2.43
CCDC7-211ENST00000638889 FKBP2P26885 142 aaKnown RBP-0.11□□□□□ -2.43
CCDC7-211ENST00000638889 MT4P47944 62 aa-0.11□□□□□ -2.43
CCDC7-211ENST00000638889 CD151P48509 253 aa-0.11□□□□□ -2.43
CCDC7-211ENST00000638889 RPL18Q07020 188 aaKnown RBP-0.11□□□□□ -2.43
CCDC7-211ENST00000638889 PDE6HQ13956 83 aa-0.11□□□□□ -2.43
CCDC7-211ENST00000638889 CIRBPQ14011 172 aaKnown RBP-0.11□□□□□ -2.43
CCDC7-211ENST00000638889 C1orf194Q5T5A4 169 aa-0.11□□□□□ -2.43
CCDC7-211ENST00000638889 LINC00471Q8N535 108 aa-0.11□□□□□ -2.43
CCDC7-211ENST00000638889 JOSD2Q8TAC2 188 aa-0.11□□□□□ -2.43
CCDC7-211ENST00000638889 PACRGQ96M98 296 aaPredicted RBP-0.11□□□□□ -2.43
CCDC7-211ENST00000638889 SLC50A1Q9BRV3 221 aa-0.11□□□□□ -2.43
CCDC7-211ENST00000638889 SPACA1Q9HBV2 294 aa-0.11□□□□□ -2.43
CCDC7-211ENST00000638889 PLAC8Q9NZF1 115 aa-0.11□□□□□ -2.43
CCDC7-211ENST00000638889 DNAH7Q8WXX0 4024 aa-0.11□□□□□ -2.43
CCDC7-211ENST00000638889 ASH1LQ9NR48 2969 aaKnown RBP-0.12□□□□□ -2.43
CCDC7-211ENST00000638889 APOBP04114 4563 aaKnown RBP-0.12□□□□□ -2.43
CCDC7-211ENST00000638889 DCHS2Q6V1P9 2916 aa-0.12□□□□□ -2.43
CCDC7-211ENST00000638889 SPTAN1Q13813 2472 aaKnown RBP-0.12□□□□□ -2.43
CCDC7-211ENST00000638889 C1orf232A0A0U1RR37 186 aa-0.12□□□□□ -2.43
CCDC7-211ENST00000638889 TINCRA0A1B0GVN0 87 aa-0.12□□□□□ -2.43
CCDC7-211ENST00000638889 OR4C45A6NMZ5 311 aa-0.12□□□□□ -2.43
CCDC7-211ENST00000638889 OR1I1O60431 355 aa-0.12□□□□□ -2.43
CCDC7-211ENST00000638889 SRP19P09132 144 aaKnown RBP-0.12□□□□□ -2.43
CCDC7-211ENST00000638889 ASAH2BP0C7U1 165 aa-0.12□□□□□ -2.43
CCDC7-211ENST00000638889 KDELR1P24390 212 aa-0.12□□□□□ -2.43
CCDC7-211ENST00000638889 SPINK7P58062 85 aa-0.12□□□□□ -2.43
CCDC7-211ENST00000638889 CD302Q8IX05 232 aa-0.12□□□□□ -2.43
CCDC7-211ENST00000638889 LINC00311Q8N616 119 aa-0.12□□□□□ -2.43
CCDC7-211ENST00000638889 OR4D11Q8NGI4 311 aa-0.12□□□□□ -2.43
CCDC7-211ENST00000638889 DHRS9Q9BPW9 319 aa-0.12□□□□□ -2.43
CCDC7-211ENST00000638889 OR52A5Q9H2C5 316 aa-0.12□□□□□ -2.43
CCDC7-211ENST00000638889 IL36BQ9NZH7 164 aa-0.12□□□□□ -2.43
CCDC7-211ENST00000638889 PXMP4Q9Y6I8 212 aa-0.12□□□□□ -2.43
CCDC7-211ENST00000638889 U3KQA8 63 aa-0.12□□□□□ -2.43
CCDC7-211ENST00000638889 MED13LQ71F56 2210 aa-0.12□□□□□ -2.43
CCDC7-211ENST00000638889 PRKDCP78527 4128 aaKnown RBP-0.12□□□□□ -2.43
CCDC7-211ENST00000638889 PDZD2O15018 2839 aa-0.12□□□□□ -2.43
CCDC7-211ENST00000638889 ACACBO00763 2458 aa-0.12□□□□□ -2.43
CCDC7-211ENST00000638889 DNAH17Q9UFH2 4485 aa-0.13□□□□□ -2.43
CCDC7-211ENST00000638889 DNAJC13O75165 2243 aa-0.13□□□□□ -2.43
CCDC7-211ENST00000638889 MYO9AB2RTY4 2548 aa-0.13□□□□□ -2.43
CCDC7-211ENST00000638889 TLN2Q9Y4G6 2542 aa-0.13□□□□□ -2.43
CCDC7-211ENST00000638889 ZFHX3Q15911 3703 aa-0.13□□□□□ -2.43
CCDC7-211ENST00000638889 CSMD3Q7Z407 3707 aa-0.13□□□□□ -2.43
CCDC7-211ENST00000638889 VPS13BQ7Z7G8 4022 aa-0.13□□□□□ -2.43
CCDC7-211ENST00000638889 E9PCH4 1651 aa-0.13□□□□□ -2.43
CCDC7-211ENST00000638889 DNAH1Q9P2D7 4330 aa-0.13□□□□□ -2.43
CCDC7-211ENST00000638889 TMEM213A2RRL7 107 aa-0.13□□□□□ -2.43
CCDC7-211ENST00000638889 CLDN25C9JDP6 229 aa-0.13□□□□□ -2.43
CCDC7-211ENST00000638889 FXYD1O00168 92 aa-0.13□□□□□ -2.43
CCDC7-211ENST00000638889 NCR3O14931 201 aa-0.13□□□□□ -2.43
CCDC7-211ENST00000638889 INE1O15225 51 aa-0.13□□□□□ -2.43
CCDC7-211ENST00000638889 CD3DP04234 171 aa-0.13□□□□□ -2.43
CCDC7-211ENST00000638889 CTSDP07339 412 aaPredicted RBP-0.13□□□□□ -2.43
CCDC7-211ENST00000638889 IFITM1P13164 125 aa-0.13□□□□□ -2.43
CCDC7-211ENST00000638889 RAB4BP61018 213 aa-0.13□□□□□ -2.43
CCDC7-211ENST00000638889 KISS1Q15726 138 aa-0.13□□□□□ -2.43
CCDC7-211ENST00000638889 Q5BKY6 102 aa-0.13□□□□□ -2.43
CCDC7-211ENST00000638889 AADACL4Q5VUY2 407 aa-0.13□□□□□ -2.43
CCDC7-211ENST00000638889 GRINAQ7Z429 371 aa-0.13□□□□□ -2.43
CCDC7-211ENST00000638889 FAM213BQ8TBF2 198 aa-0.13□□□□□ -2.43
CCDC7-211ENST00000638889 PATE1Q8WXA2 126 aa-0.13□□□□□ -2.43
CCDC7-211ENST00000638889 PLAC4Q8WY50 150 aa-0.13□□□□□ -2.43
CCDC7-211ENST00000638889 CMTM5Q96DZ9 223 aa-0.13□□□□□ -2.43
CCDC7-211ENST00000638889 C19orf60Q96EN9 201 aa-0.13□□□□□ -2.43
CCDC7-211ENST00000638889 CEP295Q9C0D2 2601 aa-0.13□□□□□ -2.43
CCDC7-211ENST00000638889 FLGP20930 4061 aaPredicted RBP-0.13□□□□□ -2.43
CCDC7-211ENST00000638889 DENND4CQ5VZ89 1909 aa-0.13□□□□□ -2.43
CCDC7-211ENST00000638889 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.13□□□□□ -2.43
CCDC7-211ENST00000638889 GCN1Q92616 2671 aaKnown RBP-0.13□□□□□ -2.43
CCDC7-211ENST00000638889 DNAH8Q96JB1 4490 aa-0.13□□□□□ -2.43
CCDC7-211ENST00000638889 TLN1Q9Y490 2541 aaKnown RBP-0.14□□□□□ -2.43
CCDC7-211ENST00000638889 GOLGA4Q13439 2230 aaKnown RBP-0.14□□□□□ -2.43
CCDC7-211ENST00000638889 NBEAL2Q6ZNJ1 2754 aa-0.14□□□□□ -2.43
CCDC7-211ENST00000638889 ALPK3Q96L96 1907 aa-0.14□□□□□ -2.43
CCDC7-211ENST00000638889 FABP5P3A8MUU1 101 aa-0.14□□□□□ -2.43
CCDC7-211ENST00000638889 DISC1C4P0D8 188 aa-0.14□□□□□ -2.43
CCDC7-211ENST00000638889 GOLGA6L19H0YKK7 550 aa-0.14□□□□□ -2.43
CCDC7-211ENST00000638889 IGKV1-5P01602 117 aa-0.14□□□□□ -2.43
CCDC7-211ENST00000638889 HLA-DRAP01903 254 aa-0.14□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms