RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 C6orf62Q9GZU0 229 aaPredicted RBP12.42□□□□□ -0.42
SMN2-216ENST00000638794 DNAH10Q8IVF4 4471 aa12.42□□□□□ -0.42
SMN2-216ENST00000638794 GNG7O60262 68 aa12.41□□□□□ -0.42
SMN2-216ENST00000638794 ELK1P19419 428 aa12.41□□□□□ -0.42
SMN2-216ENST00000638794 SPINK9Q5DT21 86 aa12.41□□□□□ -0.42
SMN2-216ENST00000638794 FAM90A2PQ658T7 463 aa12.41□□□□□ -0.42
SMN2-216ENST00000638794 TMEM217Q8N7C4 229 aa12.41□□□□□ -0.42
SMN2-216ENST00000638794 CMTM3Q96MX0 182 aa12.41□□□□□ -0.42
SMN2-216ENST00000638794 M0QYG6 137 aa12.4□□□□□ -0.42
SMN2-216ENST00000638794 ERHP84090 104 aaKnown RBP12.4□□□□□ -0.42
SMN2-216ENST00000638794 IZUMO4Q1ZYL8 232 aa12.4□□□□□ -0.42
SMN2-216ENST00000638794 GBGT1Q8N5D6 347 aa12.4□□□□□ -0.42
SMN2-216ENST00000638794 CSTL1Q9H114 145 aa12.4□□□□□ -0.42
SMN2-216ENST00000638794 KLK5Q9Y337 293 aaPredicted RBP12.4□□□□□ -0.42
SMN2-216ENST00000638794 VPS13DQ5THJ4 4388 aa12.39□□□□□ -0.43
SMN2-216ENST00000638794 MPTX1A8MV57 137 aa12.39□□□□□ -0.43
SMN2-216ENST00000638794 HPGDSO60760 199 aa12.39□□□□□ -0.43
SMN2-216ENST00000638794 TNFAIP8O95379 198 aa12.39□□□□□ -0.43
SMN2-216ENST00000638794 CMC4P56277 68 aaPredicted RBP12.39□□□□□ -0.43
SMN2-216ENST00000638794 VBP1P61758 197 aa12.39□□□□□ -0.43
SMN2-216ENST00000638794 TOMM20LQ6UXN7 152 aa12.39□□□□□ -0.43
SMN2-216ENST00000638794 TCF24Q7RTU0 167 aa12.39□□□□□ -0.43
SMN2-216ENST00000638794 ST8SIA2Q92186 375 aa12.39□□□□□ -0.43
SMN2-216ENST00000638794 GINS3Q9BRX5 216 aa12.39□□□□□ -0.43
SMN2-216ENST00000638794 FUNDC2Q9BWH2 189 aa12.39□□□□□ -0.43
SMN2-216ENST00000638794 IGKV1-5P01602 117 aa12.38□□□□□ -0.43
SMN2-216ENST00000638794 APOHP02749 345 aaPredicted RBP12.38□□□□□ -0.43
SMN2-216ENST00000638794 PI3P19957 117 aa12.38□□□□□ -0.43
SMN2-216ENST00000638794 RNASE12Q5GAN4 147 aaKnown RBP12.38□□□□□ -0.43
SMN2-216ENST00000638794 GATAD1Q8WUU5 269 aa12.38□□□□□ -0.43
SMN2-216ENST00000638794 PHLDA1Q8WV24 401 aaPredicted RBP12.38□□□□□ -0.43
SMN2-216ENST00000638794 A0A0B4J293 547 aa12.37□□□□□ -0.43
SMN2-216ENST00000638794 P0C879 139 aa12.37□□□□□ -0.43
SMN2-216ENST00000638794 PGAM2P15259 253 aa12.37□□□□□ -0.43
SMN2-216ENST00000638794 NPBWR1P48145 328 aa12.37□□□□□ -0.43
SMN2-216ENST00000638794 PIGPP57054 158 aa12.37□□□□□ -0.43
SMN2-216ENST00000638794 RND3P61587 244 aa12.37□□□□□ -0.43
SMN2-216ENST00000638794 PAFAH1B2P68402 229 aa12.37□□□□□ -0.43
SMN2-216ENST00000638794 LHFPL1Q86WI0 220 aa12.37□□□□□ -0.43
SMN2-216ENST00000638794 LILRB2Q8N423 598 aa12.37□□□□□ -0.43
SMN2-216ENST00000638794 SLC35G3Q8N808 338 aa12.37□□□□□ -0.43
SMN2-216ENST00000638794 DUSP18Q8NEJ0 188 aa12.37□□□□□ -0.43
SMN2-216ENST00000638794 ZNF486Q96H40 463 aaPredicted RBP12.37□□□□□ -0.43
SMN2-216ENST00000638794 TP53RKQ96S44 253 aa12.37□□□□□ -0.43
SMN2-216ENST00000638794 RARRES2Q99969 163 aa12.37□□□□□ -0.43
SMN2-216ENST00000638794 VSIRQ9H7M9 311 aa12.37□□□□□ -0.43
SMN2-216ENST00000638794 ZFAND3Q9H8U3 227 aa12.37□□□□□ -0.43
SMN2-216ENST00000638794 PUS1Q9Y606 427 aaKnown RBP eCLIP12.37□□□□□ -0.43
SMN2-216ENST00000638794 IGHV3-66A0A0C4DH42 116 aa12.36□□□□□ -0.43
SMN2-216ENST00000638794 ST8SIA3O43173 380 aa12.36□□□□□ -0.43
SMN2-216ENST00000638794 DFFBO76075 338 aa12.36□□□□□ -0.43
SMN2-216ENST00000638794 CD5P06127 495 aa12.36□□□□□ -0.43
SMN2-216ENST00000638794 SNCAP37840 140 aa12.36□□□□□ -0.43
SMN2-216ENST00000638794 AKR1C2P52895 323 aa12.36□□□□□ -0.43
SMN2-216ENST00000638794 ZNF600Q6ZNG1 722 aa12.36□□□□□ -0.43
SMN2-216ENST00000638794 RPP25LQ8N5L8 163 aaKnown RBP12.36□□□□□ -0.43
SMN2-216ENST00000638794 OR11H2Q8NH07 326 aa12.36□□□□□ -0.43
SMN2-216ENST00000638794 MS4A6AQ9H2W1 248 aa12.36□□□□□ -0.43
SMN2-216ENST00000638794 KLK11Q9UBX7 282 aa12.36□□□□□ -0.43
SMN2-216ENST00000638794 A0A1B0GU03 582 aa12.35□□□□□ -0.43
SMN2-216ENST00000638794 FAM25AB3EWG3 89 aa12.35□□□□□ -0.43
SMN2-216ENST00000638794 FAM25CB3EWG5 89 aa12.35□□□□□ -0.43
SMN2-216ENST00000638794 FAM25GB3EWG6 89 aa12.35□□□□□ -0.43
SMN2-216ENST00000638794 INS-IGF2F8WCM5 200 aa12.35□□□□□ -0.43
SMN2-216ENST00000638794 IFNA17P01571 189 aa12.35□□□□□ -0.43
SMN2-216ENST00000638794 RORCP51449 518 aa12.35□□□□□ -0.43
SMN2-216ENST00000638794 RNASE10Q5GAN6 216 aaKnown RBP12.35□□□□□ -0.43
SMN2-216ENST00000638794 LEMD1Q68G75 181 aa12.35□□□□□ -0.43
SMN2-216ENST00000638794 PVRIGQ6DKI7 326 aa12.35□□□□□ -0.43
SMN2-216ENST00000638794 C11orf68Q9H3H3 251 aaKnown RBP12.35□□□□□ -0.43
SMN2-216ENST00000638794 C3orf85A0A1B0GTC6 90 aa12.34□□□□□ -0.43
SMN2-216ENST00000638794 DNASE2O00115 360 aaPredicted RBP12.34□□□□□ -0.43
SMN2-216ENST00000638794 TMEM50AO95807 157 aa12.34□□□□□ -0.43
SMN2-216ENST00000638794 CA1P00915 261 aaPredicted RBP12.34□□□□□ -0.43
SMN2-216ENST00000638794 CD3DP04234 171 aa12.34□□□□□ -0.43
SMN2-216ENST00000638794 RNASE2P10153 161 aaKnown RBP12.34□□□□□ -0.43
SMN2-216ENST00000638794 PPP5CP53041 499 aa12.34□□□□□ -0.43
SMN2-216ENST00000638794 DEFB131AP59861 70 aa12.34□□□□□ -0.43
SMN2-216ENST00000638794 NANOS2P60321 138 aaKnown RBP12.34□□□□□ -0.43
SMN2-216ENST00000638794 ARRDC1Q8N5I2 433 aa12.34□□□□□ -0.43
SMN2-216ENST00000638794 FAM24BQ8N5W8 94 aa12.34□□□□□ -0.43
SMN2-216ENST00000638794 OR52I2Q8NH67 350 aa12.34□□□□□ -0.43
SMN2-216ENST00000638794 MRPL36Q9P0J6 103 aaKnown RBP12.34□□□□□ -0.43
SMN2-216ENST00000638794 AGRNO00468 2067 aa12.34□□□□□ -0.43
SMN2-216ENST00000638794 DEDDO75618 318 aa12.33□□□□□ -0.44
SMN2-216ENST00000638794 ETV6P41212 452 aa12.33□□□□□ -0.44
SMN2-216ENST00000638794 HOXA1P49639 335 aaPredicted RBP12.33□□□□□ -0.44
SMN2-216ENST00000638794 RPL11P62913 178 aaKnown RBP12.33□□□□□ -0.44
SMN2-216ENST00000638794 TRIM16LQ309B1 348 aa12.33□□□□□ -0.44
SMN2-216ENST00000638794 SP6Q3SY56 376 aa12.33□□□□□ -0.44
SMN2-216ENST00000638794 MZT2AQ6P582 158 aa12.33□□□□□ -0.44
SMN2-216ENST00000638794 OR4D10Q8NGI6 311 aa12.33□□□□□ -0.44
SMN2-216ENST00000638794 C11orf45Q8TAV5 145 aa12.33□□□□□ -0.44
SMN2-216ENST00000638794 PDCD10Q9BUL8 212 aa12.33□□□□□ -0.44
SMN2-216ENST00000638794 FNDC4Q9H6D8 234 aaPredicted RBP12.33□□□□□ -0.44
SMN2-216ENST00000638794 EXTL2Q9UBQ6 330 aa12.33□□□□□ -0.44
SMN2-216ENST00000638794 MTFP1Q9UDX5 166 aa12.33□□□□□ -0.44
SMN2-216ENST00000638794 FBXL17Q9UF56 701 aa12.33□□□□□ -0.44
SMN2-216ENST00000638794 DNAH6Q9C0G6 4158 aa12.32□□□□□ -0.44
SMN2-216ENST00000638794 TRAV2A0A0B4J234 112 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms