RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 CFHR2P36980 270 aa8.9□□□□□ -0.98
SNIP1-204ENST00000638725 POU2AF1Q16633 256 aa8.9□□□□□ -0.98
SNIP1-204ENST00000638725 VHLLQ6RSH7 139 aa8.9□□□□□ -0.98
SNIP1-204ENST00000638725 C11orf42Q8N5U0 333 aa8.9□□□□□ -0.98
SNIP1-204ENST00000638725 STPG4Q8N801 248 aa8.9□□□□□ -0.98
SNIP1-204ENST00000638725 ZNF439Q8NDP4 499 aa8.9□□□□□ -0.98
SNIP1-204ENST00000638725 SLC25A33Q9BSK2 321 aa8.9□□□□□ -0.98
SNIP1-204ENST00000638725 PRO3102Q9H379 93 aa8.9□□□□□ -0.98
SNIP1-204ENST00000638725 SLC35D1Q9NTN3 355 aa8.9□□□□□ -0.98
SNIP1-204ENST00000638725 DSPP15924 2871 aaKnown RBP8.9□□□□□ -0.99
SNIP1-204ENST00000638725 TRAV34A0A0B4J273 112 aa8.9□□□□□ -0.99
SNIP1-204ENST00000638725 TEX50A0A1B0GTY4 177 aa8.9□□□□□ -0.99
SNIP1-204ENST00000638725 A0A1W2PRE2 83 aa8.9□□□□□ -0.99
SNIP1-204ENST00000638725 IZUMO1RA6ND01 250 aa8.9□□□□□ -0.99
SNIP1-204ENST00000638725 DPRXA6NFQ7 191 aa8.9□□□□□ -0.99
SNIP1-204ENST00000638725 CRYABP02511 175 aaKnown RBP8.9□□□□□ -0.99
SNIP1-204ENST00000638725 C8orf88P0DMB2 117 aa8.9□□□□□ -0.99
SNIP1-204ENST00000638725 PRRX1P54821 245 aa8.9□□□□□ -0.99
SNIP1-204ENST00000638725 Q6ZN92 141 aa8.9□□□□□ -0.99
SNIP1-204ENST00000638725 OR10W1Q8NGF6 305 aa8.9□□□□□ -0.99
SNIP1-204ENST00000638725 ADTRPQ96IZ2 230 aa8.9□□□□□ -0.99
SNIP1-204ENST00000638725 UQCR10Q9UDW1 63 aa8.9□□□□□ -0.99
SNIP1-204ENST00000638725 INTS1Q8N201 2190 aaKnown RBP8.89□□□□□ -0.99
SNIP1-204ENST00000638725 TNRC18O15417 2968 aaPredicted RBP8.89□□□□□ -0.99
SNIP1-204ENST00000638725 C19orf67A6NJJ6 358 aa8.89□□□□□ -0.99
SNIP1-204ENST00000638725 SIAH2O43255 324 aa8.89□□□□□ -0.99
SNIP1-204ENST00000638725 RNASE2P10153 161 aaKnown RBP8.89□□□□□ -0.99
SNIP1-204ENST00000638725 HNRNPA3P51991 378 aaKnown RBP8.89□□□□□ -0.99
SNIP1-204ENST00000638725 UBE2L3P68036 154 aaKnown RBP8.89□□□□□ -0.99
SNIP1-204ENST00000638725 MAJINQ3KP22 176 aa8.89□□□□□ -0.99
SNIP1-204ENST00000638725 HES3Q5TGS1 186 aa8.89□□□□□ -0.99
SNIP1-204ENST00000638725 LCN12Q6JVE5 192 aa8.89□□□□□ -0.99
SNIP1-204ENST00000638725 DEFB108BQ8NET1 73 aa8.89□□□□□ -0.99
SNIP1-204ENST00000638725 C18orf32Q8TCD1 76 aa8.89□□□□□ -0.99
SNIP1-204ENST00000638725 ZNF331Q9NQX6 463 aaPredicted RBP8.89□□□□□ -0.99
SNIP1-204ENST00000638725 ZNF71Q9NQZ8 489 aaPredicted RBP8.89□□□□□ -0.99
SNIP1-204ENST00000638725 ZFP30Q9Y2G7 519 aa8.89□□□□□ -0.99
SNIP1-204ENST00000638725 ZNF257Q9Y2Q1 563 aa8.89□□□□□ -0.99
SNIP1-204ENST00000638725 CADP27708 2225 aa8.89□□□□□ -0.99
SNIP1-204ENST00000638725 DSCAML1Q8TD84 2053 aa8.89□□□□□ -0.99
SNIP1-204ENST00000638725 LHBP01229 141 aa8.89□□□□□ -0.99
SNIP1-204ENST00000638725 CT45A6P0DMU7 189 aa8.89□□□□□ -0.99
SNIP1-204ENST00000638725 CT45A5P0DMU8 189 aa8.89□□□□□ -0.99
SNIP1-204ENST00000638725 CT45A7P0DMV0 189 aa8.89□□□□□ -0.99
SNIP1-204ENST00000638725 C2orf83Q53S99 150 aa8.89□□□□□ -0.99
SNIP1-204ENST00000638725 BHLHA15Q7RTS1 189 aaPredicted RBP8.89□□□□□ -0.99
SNIP1-204ENST00000638725 RND1Q92730 232 aa8.89□□□□□ -0.99
SNIP1-204ENST00000638725 SLC25A2Q9BXI2 301 aa8.89□□□□□ -0.99
SNIP1-204ENST00000638725 DNAJC4Q9NNZ3 241 aa8.89□□□□□ -0.99
SNIP1-204ENST00000638725 SAA1P0DJI8 122 aaPredicted RBP8.88□□□□□ -0.99
SNIP1-204ENST00000638725 PYYP10082 97 aa8.88□□□□□ -0.99
SNIP1-204ENST00000638725 CCL11P51671 97 aa8.88□□□□□ -0.99
SNIP1-204ENST00000638725 SSBP2P81877 361 aaPredicted RBP8.88□□□□□ -0.99
SNIP1-204ENST00000638725 CD69Q07108 199 aa8.88□□□□□ -0.99
SNIP1-204ENST00000638725 OR2T6Q8NHC8 308 aa8.88□□□□□ -0.99
SNIP1-204ENST00000638725 BORCS7Q96B45 105 aa8.88□□□□□ -0.99
SNIP1-204ENST00000638725 FAM167A-AS1Q96KT0 104 aa8.88□□□□□ -0.99
SNIP1-204ENST00000638725 CLEC7AQ9BXN2 247 aa8.88□□□□□ -0.99
SNIP1-204ENST00000638725 PLSCR4Q9NRQ2 329 aa8.88□□□□□ -0.99
SNIP1-204ENST00000638725 ZNF355PQ9NSJ1 428 aa8.88□□□□□ -0.99
SNIP1-204ENST00000638725 SLC25A15Q9Y619 301 aa8.88□□□□□ -0.99
SNIP1-204ENST00000638725 SPENQ96T58 3664 aaKnown RBP8.88□□□□□ -0.99
SNIP1-204ENST00000638725 PCNX2A6NKB5 2137 aa8.88□□□□□ -0.99
SNIP1-204ENST00000638725 PRR33A8MZF0 331 aa8.88□□□□□ -0.99
SNIP1-204ENST00000638725 TCF21O43680 179 aa8.88□□□□□ -0.99
SNIP1-204ENST00000638725 NDUFB8O95169 186 aa8.88□□□□□ -0.99
SNIP1-204ENST00000638725 SRSF6Q13247 344 aaKnown RBP8.88□□□□□ -0.99
SNIP1-204ENST00000638725 SNRNP40Q96DI7 357 aaKnown RBP8.88□□□□□ -0.99
SNIP1-204ENST00000638725 LAMTOR2Q9Y2Q5 125 aa8.88□□□□□ -0.99
SNIP1-204ENST00000638725 YLPM1P49750 1951 aaKnown RBP8.87□□□□□ -0.99
SNIP1-204ENST00000638725 TANC2Q9HCD6 1990 aa8.87□□□□□ -0.99
SNIP1-204ENST00000638725 PSMB11A5LHX3 300 aa8.87□□□□□ -0.99
SNIP1-204ENST00000638725 M0R1B8 84 aa8.87□□□□□ -0.99
SNIP1-204ENST00000638725 REG1AP05451 166 aa8.87□□□□□ -0.99
SNIP1-204ENST00000638725 MFAP2P55001 183 aa8.87□□□□□ -0.99
SNIP1-204ENST00000638725 TNXAQ16473 311 aa8.87□□□□□ -0.99
SNIP1-204ENST00000638725 RTL8BQ17RB0 113 aa8.87□□□□□ -0.99
SNIP1-204ENST00000638725 PRR31Q5SQ13 230 aa8.87□□□□□ -0.99
SNIP1-204ENST00000638725 GDF5OSQ5U4N7 250 aa8.87□□□□□ -0.99
SNIP1-204ENST00000638725 C19orf35Q6ZS72 473 aa8.87□□□□□ -0.99
SNIP1-204ENST00000638725 SPACA3Q8IXA5 215 aa8.87□□□□□ -0.99
SNIP1-204ENST00000638725 PNKDQ8N490 385 aa8.87□□□□□ -0.99
SNIP1-204ENST00000638725 FDCSPQ8NFU4 85 aa8.87□□□□□ -0.99
SNIP1-204ENST00000638725 C19orf24Q9BVV8 132 aa8.87□□□□□ -0.99
SNIP1-204ENST00000638725 PROCRQ9UNN8 238 aa8.87□□□□□ -0.99
SNIP1-204ENST00000638725 NCOR1O75376 2440 aa8.87□□□□□ -0.99
SNIP1-204ENST00000638725 KLF3P57682 345 aaPredicted RBP8.87□□□□□ -0.99
SNIP1-204ENST00000638725 FAM216BQ8N7L0 139 aa8.87□□□□□ -0.99
SNIP1-204ENST00000638725 CCL13Q99616 98 aa8.87□□□□□ -0.99
SNIP1-204ENST00000638725 COMMD5Q9GZQ3 224 aa8.87□□□□□ -0.99
SNIP1-204ENST00000638725 RAB9BQ9NP90 201 aa8.87□□□□□ -0.99
SNIP1-204ENST00000638725 CACNA1GO43497 2377 aa8.86□□□□□ -0.99
SNIP1-204ENST00000638725 CDX4O14627 284 aaPredicted RBP8.86□□□□□ -0.99
SNIP1-204ENST00000638725 NKX2-8O15522 239 aa8.86□□□□□ -0.99
SNIP1-204ENST00000638725 GPR6P46095 362 aaPredicted RBP8.86□□□□□ -0.99
SNIP1-204ENST00000638725 PRR27Q6MZM9 219 aa8.86□□□□□ -0.99
SNIP1-204ENST00000638725 OR1L8Q8NGR8 309 aa8.86□□□□□ -0.99
SNIP1-204ENST00000638725 MBD6Q96DN6 1003 aa8.86□□□□□ -0.99
SNIP1-204ENST00000638725 MRPL32Q9BYC8 188 aaKnown RBP8.86□□□□□ -0.99
SNIP1-204ENST00000638725 MRPL27Q9P0M9 148 aaKnown RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms