RNA–Protein interactions for RNA: ENST00000638546.1

HCG27-205, Transcript of HLA complex group 27, humanhuman

TSL 1 (best)

Gene HCG27, Length 1,641 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG27-205ENST00000638546 RPS10P5Q9NQ39 176 aa13.27□□□□□ -0.29
HCG27-205ENST00000638546 SMCO4Q9NRQ5 59 aa13.27□□□□□ -0.29
HCG27-205ENST00000638546 C7orf77A4D0Y5 90 aa13.26□□□□□ -0.29
HCG27-205ENST00000638546 H3BQ15 152 aa13.26□□□□□ -0.29
HCG27-205ENST00000638546 J3QKU1 62 aa13.26□□□□□ -0.29
HCG27-205ENST00000638546 NBR2O15453 112 aa13.26□□□□□ -0.29
HCG27-205ENST00000638546 REG1AP05451 166 aa13.26□□□□□ -0.29
HCG27-205ENST00000638546 DEFA4P12838 97 aa13.26□□□□□ -0.29
HCG27-205ENST00000638546 OR10J1P30954 320 aa13.26□□□□□ -0.29
HCG27-205ENST00000638546 RHOBP62745 196 aa13.26□□□□□ -0.29
HCG27-205ENST00000638546 RHEBQ15382 184 aa13.26□□□□□ -0.29
HCG27-205ENST00000638546 MMDQ15546 238 aa13.26□□□□□ -0.29
HCG27-205ENST00000638546 SSX2Q16385 188 aa13.26□□□□□ -0.29
HCG27-205ENST00000638546 IQCF2Q8IXL9 164 aa13.26□□□□□ -0.29
HCG27-205ENST00000638546 OR2T10Q8NGZ9 312 aa13.26□□□□□ -0.29
HCG27-205ENST00000638546 FAM168AQ92567 244 aa13.26□□□□□ -0.29
HCG27-205ENST00000638546 EAF1Q96JC9 268 aaPredicted RBP13.26□□□□□ -0.29
HCG27-205ENST00000638546 TBX15Q96SF7 602 aa13.26□□□□□ -0.29
HCG27-205ENST00000638546 TBL2Q9Y4P3 447 aaKnown RBP13.26□□□□□ -0.29
HCG27-205ENST00000638546 FLNCQ14315 2725 aa13.26□□□□□ -0.29
HCG27-205ENST00000638546 NDUFS8O00217 210 aa13.25□□□□□ -0.29
HCG27-205ENST00000638546 FCN1O00602 326 aa13.25□□□□□ -0.29
HCG27-205ENST00000638546 STAG3L2P0CL84 134 aa13.25□□□□□ -0.29
HCG27-205ENST00000638546 STAG3L3P0CL85 134 aa13.25□□□□□ -0.29
HCG27-205ENST00000638546 UBE2E1P51965 193 aa13.25□□□□□ -0.29
HCG27-205ENST00000638546 ETFRF1Q6IPR1 90 aa13.25□□□□□ -0.29
HCG27-205ENST00000638546 ACY3Q96HD9 319 aa13.25□□□□□ -0.29
HCG27-205ENST00000638546 SRSF8Q9BRL6 282 aaKnown RBP13.25□□□□□ -0.29
HCG27-205ENST00000638546 C20orf24Q9BUV8 137 aa13.25□□□□□ -0.29
HCG27-205ENST00000638546 POLR3KQ9Y2Y1 108 aaPredicted RBP13.25□□□□□ -0.29
HCG27-205ENST00000638546 UBR5O95071 2799 aaPredicted RBP13.25□□□□□ -0.29
HCG27-205ENST00000638546 IGKV1OR2-108A0A075B7D4 117 aa13.24□□□□□ -0.29
HCG27-205ENST00000638546 TEX22C9J3V5 150 aa13.24□□□□□ -0.29
HCG27-205ENST00000638546 NDUFA3O95167 84 aa13.24□□□□□ -0.29
HCG27-205ENST00000638546 CXorf1O96002 111 aa13.24□□□□□ -0.29
HCG27-205ENST00000638546 AREGP15514 252 aa13.24□□□□□ -0.29
HCG27-205ENST00000638546 CD81P60033 236 aa13.24□□□□□ -0.29
HCG27-205ENST00000638546 MEF2BQ02080 365 aaPredicted RBP13.24□□□□□ -0.29
HCG27-205ENST00000638546 FAM90A2PQ658T7 463 aa13.24□□□□□ -0.29
HCG27-205ENST00000638546 C10orf105Q8TEF2 133 aa13.24□□□□□ -0.29
HCG27-205ENST00000638546 TVP23CQ96ET8 276 aa13.24□□□□□ -0.29
HCG27-205ENST00000638546 NIPSNAP3BQ9BS92 247 aa13.24□□□□□ -0.29
HCG27-205ENST00000638546 FNDC4Q9H6D8 234 aaPredicted RBP13.24□□□□□ -0.29
HCG27-205ENST00000638546 HES1Q14469 280 aa13.24□□□□□ -0.29
HCG27-205ENST00000638546 CYP2G1PQ6ZSU1 146 aa13.24□□□□□ -0.29
HCG27-205ENST00000638546 OR1P1Q8NH06 330 aa13.24□□□□□ -0.29
HCG27-205ENST00000638546 ABHD5Q8WTS1 349 aa13.24□□□□□ -0.29
HCG27-205ENST00000638546 GATAD1Q8WUU5 269 aa13.24□□□□□ -0.29
HCG27-205ENST00000638546 SRSF12Q8WXF0 261 aaKnown RBP13.24□□□□□ -0.29
HCG27-205ENST00000638546 VWC2LB2RUY7 222 aa13.23□□□□□ -0.29
HCG27-205ENST00000638546 PAGE4O60829 102 aa13.23□□□□□ -0.29
HCG27-205ENST00000638546 TSPAN9O75954 239 aa13.23□□□□□ -0.29
HCG27-205ENST00000638546 CNIH1O95406 144 aa13.23□□□□□ -0.29
HCG27-205ENST00000638546 AKR1C3P42330 323 aa13.23□□□□□ -0.29
HCG27-205ENST00000638546 ATP5J2P56134 94 aa13.23□□□□□ -0.29
HCG27-205ENST00000638546 SSBP2P81877 361 aaPredicted RBP13.23□□□□□ -0.29
HCG27-205ENST00000638546 CLEC2AQ6UVW9 174 aa13.23□□□□□ -0.29
HCG27-205ENST00000638546 DYNAPQ8N1N2 210 aa13.23□□□□□ -0.29
HCG27-205ENST00000638546 THAP8Q8NA92 274 aa13.23□□□□□ -0.29
HCG27-205ENST00000638546 NANPQ8TBE9 248 aa13.23□□□□□ -0.29
HCG27-205ENST00000638546 NPIPB3Q92617 1050 aa13.23□□□□□ -0.29
HCG27-205ENST00000638546 MALSU1Q96EH3 234 aa13.23□□□□□ -0.29
HCG27-205ENST00000638546 MISP3Q96FF7 219 aa13.23□□□□□ -0.29
HCG27-205ENST00000638546 C19orf24Q9BVV8 132 aa13.23□□□□□ -0.29
HCG27-205ENST00000638546 TNCP24821 2201 aa13.22□□□□□ -0.29
HCG27-205ENST00000638546 TMEM250H0YL14 139 aa13.22□□□□□ -0.29
HCG27-205ENST00000638546 CORTO00230 105 aa13.22□□□□□ -0.29
HCG27-205ENST00000638546 MT-CO2P00403 227 aa13.22□□□□□ -0.29
HCG27-205ENST00000638546 CRYGCP07315 174 aa13.22□□□□□ -0.29
HCG27-205ENST00000638546 ARL14EPLP0DKL9 152 aa13.22□□□□□ -0.29
HCG27-205ENST00000638546 CD24P25063 80 aa13.22□□□□□ -0.29
HCG27-205ENST00000638546 PAX6P26367 422 aa13.22□□□□□ -0.29
HCG27-205ENST00000638546 EBI3Q14213 229 aa13.22□□□□□ -0.29
HCG27-205ENST00000638546 C5orf64Q2M2E5 130 aa13.22□□□□□ -0.29
HCG27-205ENST00000638546 LPAR2Q9HBW0 351 aa13.22□□□□□ -0.29
HCG27-205ENST00000638546 SEPSECSQ9HD40 501 aaKnown RBP13.22□□□□□ -0.29
HCG27-205ENST00000638546 F11RQ9Y624 299 aaKnown RBP13.22□□□□□ -0.29
HCG27-205ENST00000638546 COX6B1P14854 86 aa13.21□□□□□ -0.29
HCG27-205ENST00000638546 MFAP2P55001 183 aa13.21□□□□□ -0.29
HCG27-205ENST00000638546 SPATA31B1PQ5VZV4 182 aa13.21□□□□□ -0.29
HCG27-205ENST00000638546 SPNS3Q6ZMD2 512 aa13.21□□□□□ -0.29
HCG27-205ENST00000638546 Q8N6K4 173 aa13.21□□□□□ -0.29
HCG27-205ENST00000638546 OR4F5Q8NH21 305 aa13.21□□□□□ -0.29
HCG27-205ENST00000638546 C17orf50Q8WW18 174 aa13.21□□□□□ -0.29
HCG27-205ENST00000638546 OR4F4Q96R69 305 aa13.21□□□□□ -0.29
HCG27-205ENST00000638546 TUBA4BQ9H853 241 aa13.21□□□□□ -0.29
HCG27-205ENST00000638546 FUT9Q9Y231 359 aa13.21□□□□□ -0.29
HCG27-205ENST00000638546 USP9XQ93008 2570 aaPredicted RBP13.21□□□□□ -0.29
HCG27-205ENST00000638546 DCHS2Q6V1P9 2916 aa13.21□□□□□ -0.29
HCG27-205ENST00000638546 IGHV4-61A0A0C4DH41 118 aa13.21□□□□□ -0.3
HCG27-205ENST00000638546 APELAP0DMC3 54 aa13.21□□□□□ -0.3
HCG27-205ENST00000638546 GATA2P23769 480 aaPredicted RBP13.21□□□□□ -0.3
HCG27-205ENST00000638546 SRSF1Q07955 248 aaKnown RBP eCLIP13.21□□□□□ -0.3
HCG27-205ENST00000638546 FAM78BQ5VT40 261 aa13.21□□□□□ -0.3
HCG27-205ENST00000638546 C22orf15Q8WYQ4 148 aa13.21□□□□□ -0.3
HCG27-205ENST00000638546 TCRBV4S1A1TA0A5B7 111 aa13.2□□□□□ -0.3
HCG27-205ENST00000638546 C11orf94C9JXX5 98 aa13.2□□□□□ -0.3
HCG27-205ENST00000638546 ATF4P18848 351 aaPredicted RBP13.2□□□□□ -0.3
HCG27-205ENST00000638546 GCHFRP30047 84 aa13.2□□□□□ -0.3
HCG27-205ENST00000638546 RND2P52198 227 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms