RNA–Protein interactions for RNA: ENST00000638514.1

KCNMA1-238, Transcript of potassium calcium-activated channel subfamily M alpha 1, human

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 3,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNMA1-238	ENST00000638514	MPV17L2	Q567V2	206 aa		11.29	□□□□□ -0.6
KCNMA1-238	ENST00000638514	PRAMEF5	Q5TYX0	476 aa		11.29	□□□□□ -0.6
KCNMA1-238	ENST00000638514	PRAMEF6	Q5VXH4	476 aa		11.29	□□□□□ -0.6
KCNMA1-238	ENST00000638514	STPG3	Q8N7X2	389 aa		11.29	□□□□□ -0.6
KCNMA1-238	ENST00000638514	OR4A16	Q8NH70	328 aa		11.29	□□□□□ -0.6
KCNMA1-238	ENST00000638514	NEUROG1	Q92886	237 aa		11.29	□□□□□ -0.6
KCNMA1-238	ENST00000638514	SMIM12	Q96EX1	92 aa		11.29	□□□□□ -0.6
KCNMA1-238	ENST00000638514	HSD17B10	Q99714	261 aa	Known RBP	11.29	□□□□□ -0.6
KCNMA1-238	ENST00000638514	NPVF	Q9HCQ7	196 aa		11.29	□□□□□ -0.6
KCNMA1-238	ENST00000638514	LY6G6E	A0A0G2JKS1	128 aa		11.29	□□□□□ -0.6
KCNMA1-238	ENST00000638514	FAM181B	A6NEQ2	426 aa		11.29	□□□□□ -0.6
KCNMA1-238	ENST00000638514	OOEP	A6NGQ2	149 aa		11.29	□□□□□ -0.6
KCNMA1-238	ENST00000638514		M0R2Z0	102 aa		11.29	□□□□□ -0.6
KCNMA1-238	ENST00000638514	ZNF146	Q15072	292 aa		11.29	□□□□□ -0.6
KCNMA1-238	ENST00000638514	LRRC10	Q5BKY1	277 aa		11.29	□□□□□ -0.6
KCNMA1-238	ENST00000638514	WDR86	Q86TI4	376 aa		11.29	□□□□□ -0.6
KCNMA1-238	ENST00000638514	MDP1	Q86V88	176 aa		11.29	□□□□□ -0.6
KCNMA1-238	ENST00000638514	NBEA	Q8NFP9	2946 aa		11.29	□□□□□ -0.6
KCNMA1-238	ENST00000638514	TNFRSF14	Q92956	283 aa		11.29	□□□□□ -0.6
KCNMA1-238	ENST00000638514	ST6GALNAC6	Q969X2	333 aa		11.29	□□□□□ -0.6
KCNMA1-238	ENST00000638514		U3KQA8	63 aa		11.29	□□□□□ -0.6
KCNMA1-238	ENST00000638514	NCKAP5	O14513	1909 aa		11.29	□□□□□ -0.6
KCNMA1-238	ENST00000638514	PRSS46	E5RG02	174 aa		11.29	□□□□□ -0.6
KCNMA1-238	ENST00000638514		H0YJW9	148 aa		11.29	□□□□□ -0.6
KCNMA1-238	ENST00000638514	ISLR	O14498	428 aa		11.29	□□□□□ -0.6
KCNMA1-238	ENST00000638514	TNXA	Q16473	311 aa		11.29	□□□□□ -0.6
KCNMA1-238	ENST00000638514	GUCD1	Q96NT3	240 aa		11.29	□□□□□ -0.6
KCNMA1-238	ENST00000638514	ZNF71	Q9NQZ8	489 aa	Predicted RBP	11.29	□□□□□ -0.6
KCNMA1-238	ENST00000638514	HAND1	O96004	215 aa		11.28	□□□□□ -0.6
KCNMA1-238	ENST00000638514	CELA3B	P08861	270 aa		11.28	□□□□□ -0.6
KCNMA1-238	ENST00000638514	UBE2G1	P62253	170 aa		11.28	□□□□□ -0.6
KCNMA1-238	ENST00000638514	TBC1D28	Q2M2D7	210 aa		11.28	□□□□□ -0.6
KCNMA1-238	ENST00000638514	IBA57	Q5T440	356 aa	Known RBP	11.28	□□□□□ -0.6
KCNMA1-238	ENST00000638514	KLF13	Q9Y2Y9	288 aa	Predicted RBP	11.28	□□□□□ -0.6
KCNMA1-238	ENST00000638514	LSM4	Q9Y4Z0	139 aa	Known RBP	11.28	□□□□□ -0.6
KCNMA1-238	ENST00000638514	SMIM27	A0A1W2PRY6	76 aa		11.28	□□□□□ -0.6
KCNMA1-238	ENST00000638514	IZUMO1R	A6ND01	250 aa		11.28	□□□□□ -0.6
KCNMA1-238	ENST00000638514	MGST1	P10620	155 aa	Known RBP	11.28	□□□□□ -0.6
KCNMA1-238	ENST00000638514	RPS20	P60866	119 aa	Known RBP	11.28	□□□□□ -0.6
KCNMA1-238	ENST00000638514	TBR1	Q16650	682 aa		11.28	□□□□□ -0.6
KCNMA1-238	ENST00000638514	EBLN2	Q6P2I7	272 aa		11.28	□□□□□ -0.6
KCNMA1-238	ENST00000638514	MGA	Q8IWI9	3026 aa		11.28	□□□□□ -0.6
KCNMA1-238	ENST00000638514	C9orf172	C9J069	976 aa		11.27	□□□□□ -0.6
KCNMA1-238	ENST00000638514	SPRY3	O43610	288 aa		11.27	□□□□□ -0.6
KCNMA1-238	ENST00000638514	VDAC2	P45880	294 aa	Predicted RBP	11.27	□□□□□ -0.6
KCNMA1-238	ENST00000638514	SLA	Q13239	276 aa		11.27	□□□□□ -0.6
KCNMA1-238	ENST00000638514	ABHD12	Q8N2K0	398 aa		11.27	□□□□□ -0.6
KCNMA1-238	ENST00000638514	OR8B3	Q8NGG8	313 aa		11.27	□□□□□ -0.6
KCNMA1-238	ENST00000638514	OR8B2	Q96RD0	313 aa		11.27	□□□□□ -0.6
KCNMA1-238	ENST00000638514	IGKV3D-15	A0A087WSY6	115 aa		11.27	□□□□□ -0.61
KCNMA1-238	ENST00000638514	CORT	O00230	105 aa		11.27	□□□□□ -0.61
KCNMA1-238	ENST00000638514	PSPN	O60542	156 aa		11.27	□□□□□ -0.61
KCNMA1-238	ENST00000638514	COL8A2	P25067	703 aa		11.27	□□□□□ -0.61
KCNMA1-238	ENST00000638514	RAB31	Q13636	194 aa		11.27	□□□□□ -0.61
KCNMA1-238	ENST00000638514	PSG5	Q15238	335 aa		11.27	□□□□□ -0.61
KCNMA1-238	ENST00000638514	TEPP	Q6URK8	271 aa		11.27	□□□□□ -0.61
KCNMA1-238	ENST00000638514	TMEM178A	Q8NBL3	297 aa		11.27	□□□□□ -0.61
KCNMA1-238	ENST00000638514	TMEM167B	Q9NRX6	74 aa		11.27	□□□□□ -0.61
KCNMA1-238	ENST00000638514	PSG11	Q9UQ72	335 aa		11.27	□□□□□ -0.61
KCNMA1-238	ENST00000638514	ARL2-SNX15	V9GYD0	113 aa		11.27	□□□□□ -0.61
KCNMA1-238	ENST00000638514		M0R1B8	84 aa		11.27	□□□□□ -0.61
KCNMA1-238	ENST00000638514	GFRA3	O60609	400 aa		11.27	□□□□□ -0.61
KCNMA1-238	ENST00000638514	C1orf159	Q96HA4	380 aa		11.27	□□□□□ -0.61
KCNMA1-238	ENST00000638514	BOD1L1	Q8NFC6	3051 aa		11.27	□□□□□ -0.61
KCNMA1-238	ENST00000638514	ACTL6B	O94805	426 aa		11.26	□□□□□ -0.61
KCNMA1-238	ENST00000638514	AES	Q08117	197 aa		11.26	□□□□□ -0.61
KCNMA1-238	ENST00000638514	MIR17HG	Q75NE6	70 aa		11.26	□□□□□ -0.61
KCNMA1-238	ENST00000638514	OR2Z1	Q8NG97	314 aa		11.26	□□□□□ -0.61
KCNMA1-238	ENST00000638514	FCGR3B	O75015	233 aa		11.26	□□□□□ -0.61
KCNMA1-238	ENST00000638514	WFDC12	Q8WWY7	111 aa		11.26	□□□□□ -0.61
KCNMA1-238	ENST00000638514	BMI1	P35226	326 aa		11.26	□□□□□ -0.61
KCNMA1-238	ENST00000638514	SLC35E4	Q6ICL7	350 aa		11.26	□□□□□ -0.61
KCNMA1-238	ENST00000638514	RNASEK	Q6P5S7	137 aa	Known RBP	11.26	□□□□□ -0.61
KCNMA1-238	ENST00000638514	TMEM108	Q6UXF1	575 aa		11.26	□□□□□ -0.61
KCNMA1-238	ENST00000638514	SLC25A10	Q9UBX3	287 aa	Predicted RBP	11.26	□□□□□ -0.61
KCNMA1-238	ENST00000638514	WASHC3	Q9Y3C0	194 aa		11.26	□□□□□ -0.61
KCNMA1-238	ENST00000638514	DSP	P15924	2871 aa	Known RBP	11.26	□□□□□ -0.61
KCNMA1-238	ENST00000638514	FAM90A9P	A6NNJ1	464 aa		11.25	□□□□□ -0.61
KCNMA1-238	ENST00000638514		H0Y8G0	127 aa		11.25	□□□□□ -0.61
KCNMA1-238	ENST00000638514	SPACA3	Q8IXA5	215 aa		11.25	□□□□□ -0.61
KCNMA1-238	ENST00000638514	OR52E5	Q8NH55	327 aa		11.25	□□□□□ -0.61
KCNMA1-238	ENST00000638514	TECR	Q9NZ01	308 aa	Known RBP	11.25	□□□□□ -0.61
KCNMA1-238	ENST00000638514	ANKRD11	Q6UB99	2663 aa	Predicted RBP	11.25	□□□□□ -0.61
KCNMA1-238	ENST00000638514	WNT9B	O14905	357 aa		11.25	□□□□□ -0.61
KCNMA1-238	ENST00000638514	KLK10	O43240	276 aa		11.25	□□□□□ -0.61
KCNMA1-238	ENST00000638514	SMIM21	Q3B7S5	101 aa		11.25	□□□□□ -0.61
KCNMA1-238	ENST00000638514	ACACB	O00763	2458 aa		11.25	□□□□□ -0.61
KCNMA1-238	ENST00000638514	IGHV3OR15-7	A0A075B7D8	119 aa		11.25	□□□□□ -0.61
KCNMA1-238	ENST00000638514	SLC25A40	Q8TBP6	338 aa		11.25	□□□□□ -0.61
KCNMA1-238	ENST00000638514	SAP30L	Q9HAJ7	183 aa		11.25	□□□□□ -0.61
KCNMA1-238	ENST00000638514	TOX4	O94842	621 aa		11.24	□□□□□ -0.61
KCNMA1-238	ENST00000638514	CA1	P00915	261 aa	Predicted RBP	11.24	□□□□□ -0.61
KCNMA1-238	ENST00000638514	ERVK-16	P61578	105 aa		11.24	□□□□□ -0.61
KCNMA1-238	ENST00000638514	PSG9	Q00887	426 aa		11.24	□□□□□ -0.61
KCNMA1-238	ENST00000638514	FOXF2	Q12947	444 aa		11.24	□□□□□ -0.61
KCNMA1-238	ENST00000638514	PLEKHA3	Q9HB20	300 aa		11.24	□□□□□ -0.61
KCNMA1-238	ENST00000638514	MUC21	A0A0G2JKD1	596 aa		11.24	□□□□□ -0.61
KCNMA1-238	ENST00000638514	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	11.24	□□□□□ -0.61
KCNMA1-238	ENST00000638514	MUC21	A0A140T8X8	626 aa		11.24	□□□□□ -0.61
KCNMA1-238	ENST00000638514	C2orf70	A6NJV1	201 aa		11.24	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms