RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 SUB1P53999 127 aaKnown RBP eCLIP17.32■□□□□ 0.36
CLN6-224ENST00000638076 LY6DQ14210 128 aa17.32■□□□□ 0.36
CLN6-224ENST00000638076 CBLN4Q9NTU7 201 aa17.32■□□□□ 0.36
CLN6-224ENST00000638076 MIOXQ9UGB7 285 aa17.32■□□□□ 0.36
CLN6-224ENST00000638076 DCHS2Q6V1P9 2916 aa17.32■□□□□ 0.36
CLN6-224ENST00000638076 IGHV1-3A0A0C4DH29 117 aa17.32■□□□□ 0.36
CLN6-224ENST00000638076 A0A1W2PPI3 338 aa17.32■□□□□ 0.36
CLN6-224ENST00000638076 HIST1H2BKO60814 126 aa17.32■□□□□ 0.36
CLN6-224ENST00000638076 HIST1H2BJP06899 126 aa17.32■□□□□ 0.36
CLN6-224ENST00000638076 HIST1H2BOP23527 126 aa17.32■□□□□ 0.36
CLN6-224ENST00000638076 CNTFRP26992 372 aa17.32■□□□□ 0.36
CLN6-224ENST00000638076 HIST1H2BBP33778 126 aa17.32■□□□□ 0.36
CLN6-224ENST00000638076 HIST1H2BDP58876 126 aa17.32■□□□□ 0.36
CLN6-224ENST00000638076 HIST1H2BCP62807 126 aa17.32■□□□□ 0.36
CLN6-224ENST00000638076 HIST2H2BEQ16778 126 aa17.32■□□□□ 0.36
CLN6-224ENST00000638076 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.32■□□□□ 0.36
CLN6-224ENST00000638076 BEND2Q8NDZ0 799 aa17.32■□□□□ 0.36
CLN6-224ENST00000638076 C8orf46Q8TAG6 207 aa17.32■□□□□ 0.36
CLN6-224ENST00000638076 HIST1H2BHQ93079 126 aa17.32■□□□□ 0.36
CLN6-224ENST00000638076 HIST1H2BNQ99877 126 aa17.32■□□□□ 0.36
CLN6-224ENST00000638076 HIST1H2BMQ99879 126 aa17.32■□□□□ 0.36
CLN6-224ENST00000638076 ELOVL1Q9BW60 279 aa17.32■□□□□ 0.36
CLN6-224ENST00000638076 FNDC4Q9H6D8 234 aaPredicted RBP17.32■□□□□ 0.36
CLN6-224ENST00000638076 TPRP12270 2363 aaKnown RBP17.31■□□□□ 0.36
CLN6-224ENST00000638076 PGPEP1LA6NFU8 196 aa17.31■□□□□ 0.36
CLN6-224ENST00000638076 RBP4P02753 201 aa17.31■□□□□ 0.36
CLN6-224ENST00000638076 S100A8P05109 93 aa17.31■□□□□ 0.36
CLN6-224ENST00000638076 REG1AP05451 166 aa17.31■□□□□ 0.36
CLN6-224ENST00000638076 S100PP25815 95 aa17.31■□□□□ 0.36
CLN6-224ENST00000638076 NDUFA6P56556 154 aa17.31■□□□□ 0.36
CLN6-224ENST00000638076 TEX45Q8NA69 505 aa17.31■□□□□ 0.36
CLN6-224ENST00000638076 RNASEH2CQ8TDP1 164 aaKnown RBP17.31■□□□□ 0.36
CLN6-224ENST00000638076 SOD3P08294 240 aa17.31■□□□□ 0.36
CLN6-224ENST00000638076 PSG5Q15238 335 aa17.31■□□□□ 0.36
CLN6-224ENST00000638076 ONECUT1Q9UBC0 465 aa17.31■□□□□ 0.36
CLN6-224ENST00000638076 TRBV20OR9-2A0A075B6H5 130 aa17.3■□□□□ 0.36
CLN6-224ENST00000638076 TGOLN2O43493 480 aa17.3■□□□□ 0.36
CLN6-224ENST00000638076 SSBP2P81877 361 aaPredicted RBP17.3■□□□□ 0.36
CLN6-224ENST00000638076 ZNF114Q8NC26 417 aa17.3■□□□□ 0.36
CLN6-224ENST00000638076 TECRQ9NZ01 308 aaKnown RBP17.3■□□□□ 0.36
CLN6-224ENST00000638076 OR5G3P0C626 314 aa17.3■□□□□ 0.36
CLN6-224ENST00000638076 C11orf71Q6IPW1 123 aa17.3■□□□□ 0.36
CLN6-224ENST00000638076 FRZBQ92765 325 aa17.3■□□□□ 0.36
CLN6-224ENST00000638076 PYGO2Q9BRQ0 406 aa17.3■□□□□ 0.36
CLN6-224ENST00000638076 C19orf24Q9BVV8 132 aa17.3■□□□□ 0.36
CLN6-224ENST00000638076 C22orf46C9J442 243 aa17.29■□□□□ 0.36
CLN6-224ENST00000638076 IGHV3-48P01763 117 aa17.29■□□□□ 0.36
CLN6-224ENST00000638076 PRSS8Q16651 343 aa17.29■□□□□ 0.36
CLN6-224ENST00000638076 CLEC12BQ2HXU8 276 aa17.29■□□□□ 0.36
CLN6-224ENST00000638076 MMD2Q8IY49 270 aa17.29■□□□□ 0.36
CLN6-224ENST00000638076 PNKDQ8N490 385 aa17.29■□□□□ 0.36
CLN6-224ENST00000638076 TMEM37Q8WXS4 190 aa17.29■□□□□ 0.36
CLN6-224ENST00000638076 RPEQ96AT9 228 aa17.29■□□□□ 0.36
CLN6-224ENST00000638076 LIPFP07098 398 aa17.29■□□□□ 0.36
CLN6-224ENST00000638076 TRGC1P0CF51 173 aa17.29■□□□□ 0.36
CLN6-224ENST00000638076 HOXA5P20719 270 aa17.29■□□□□ 0.36
CLN6-224ENST00000638076 TNXAQ16473 311 aa17.29■□□□□ 0.36
CLN6-224ENST00000638076 NPIPB3Q92617 1050 aa17.29■□□□□ 0.36
CLN6-224ENST00000638076 ZNF503Q96F45 646 aa17.29■□□□□ 0.36
CLN6-224ENST00000638076 TIMD4Q96H15 378 aa17.29■□□□□ 0.36
CLN6-224ENST00000638076 OR7C2O60412 319 aa17.28■□□□□ 0.36
CLN6-224ENST00000638076 CRYGBP07316 175 aa17.28■□□□□ 0.36
CLN6-224ENST00000638076 C4orf17Q53FE4 359 aa17.28■□□□□ 0.36
CLN6-224ENST00000638076 LY6G5BQ8NDX9 201 aa17.28■□□□□ 0.36
CLN6-224ENST00000638076 TMEM167BQ9NRX6 74 aa17.28■□□□□ 0.36
CLN6-224ENST00000638076 A0A1W2PPQ1 181 aa17.27■□□□□ 0.36
CLN6-224ENST00000638076 IGLC7A0M8Q6 106 aa17.27■□□□□ 0.36
CLN6-224ENST00000638076 PQLC2Q6ZP29 291 aa17.27■□□□□ 0.36
CLN6-224ENST00000638076 SRD5A3Q9H8P0 318 aa17.27■□□□□ 0.36
CLN6-224ENST00000638076 SIGLEC9Q9Y336 463 aa17.27■□□□□ 0.36
CLN6-224ENST00000638076 AMMECR1Q9Y4X0 333 aaPredicted RBP17.27■□□□□ 0.36
CLN6-224ENST00000638076 COL6A6A6NMZ7 2263 aa17.27■□□□□ 0.36
CLN6-224ENST00000638076 PHOX2AO14813 284 aa17.27■□□□□ 0.35
CLN6-224ENST00000638076 RPL27AP46776 148 aaKnown RBP17.27■□□□□ 0.35
CLN6-224ENST00000638076 TAS2R45P59539 299 aa17.27■□□□□ 0.35
CLN6-224ENST00000638076 HCP5Q6MZN7 132 aa17.27■□□□□ 0.35
CLN6-224ENST00000638076 UHRF2Q96PU4 802 aa17.27■□□□□ 0.35
CLN6-224ENST00000638076 SLC25A33Q9BSK2 321 aa17.26■□□□□ 0.35
CLN6-224ENST00000638076 MRPL36Q9P0J6 103 aaKnown RBP17.26■□□□□ 0.35
CLN6-224ENST00000638076 NAV3Q8IVL0 2385 aa17.26■□□□□ 0.35
CLN6-224ENST00000638076 PSMB11A5LHX3 300 aa17.26■□□□□ 0.35
CLN6-224ENST00000638076 PLXNB1O43157 2135 aa17.26■□□□□ 0.35
CLN6-224ENST00000638076 S100A9P06702 114 aaKnown RBP17.26■□□□□ 0.35
CLN6-224ENST00000638076 APELAP0DMC3 54 aa17.26■□□□□ 0.35
CLN6-224ENST00000638076 CD99P14209 185 aa17.26■□□□□ 0.35
CLN6-224ENST00000638076 AREGP15514 252 aa17.26■□□□□ 0.35
CLN6-224ENST00000638076 S100A12P80511 92 aa17.26■□□□□ 0.35
CLN6-224ENST00000638076 NEU4Q8WWR8 484 aaPredicted RBP17.26■□□□□ 0.35
CLN6-224ENST00000638076 TCEAL7Q9BRU2 100 aa17.26■□□□□ 0.35
CLN6-224ENST00000638076 ARL2-SNX15V9GYD0 113 aa17.26■□□□□ 0.35
CLN6-224ENST00000638076 OR10J4P0C629 311 aa17.25■□□□□ 0.35
CLN6-224ENST00000638076 SMIM6P0DI80 62 aa17.25■□□□□ 0.35
CLN6-224ENST00000638076 SRP14P37108 136 aaKnown RBP17.25■□□□□ 0.35
CLN6-224ENST00000638076 ZNF90Q03938 601 aa17.25■□□□□ 0.35
CLN6-224ENST00000638076 C11orf52Q96A22 123 aa17.25■□□□□ 0.35
CLN6-224ENST00000638076 IGKV1D-37A0A075B6S9 117 aa17.25■□□□□ 0.35
CLN6-224ENST00000638076 TCRBV4S1A1TA0A5B7 111 aa17.25■□□□□ 0.35
CLN6-224ENST00000638076 PPP5D1E7EU14 171 aa17.25■□□□□ 0.35
CLN6-224ENST00000638076 LY6LH3BQJ8 138 aa17.25■□□□□ 0.35
CLN6-224ENST00000638076 C8orf88P0DMB2 117 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms