RNA–Protein interactions for RNA: ENST00000637952.1

CACNA1A-254, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 3,894 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-254ENST00000637952 OR5B12Q96R08 314 aa6.92□□□□□ -1.3
CACNA1A-254ENST00000637952 TCEAL7Q9BRU2 100 aa6.92□□□□□ -1.3
CACNA1A-254ENST00000637952 TMPRSS5Q9H3S3 457 aa6.92□□□□□ -1.3
CACNA1A-254ENST00000637952 DUXBA0A1W2PPF3 345 aa6.92□□□□□ -1.3
CACNA1A-254ENST00000637952 RBFOX2O43251 390 aaKnown RBP eCLIP6.92□□□□□ -1.3
CACNA1A-254ENST00000637952 CGB3P0DN86 165 aa6.92□□□□□ -1.3
CACNA1A-254ENST00000637952 CGB7P0DN87 165 aa6.92□□□□□ -1.3
CACNA1A-254ENST00000637952 PAX5Q02548 391 aa6.92□□□□□ -1.3
CACNA1A-254ENST00000637952 PSG5Q15238 335 aa6.92□□□□□ -1.3
CACNA1A-254ENST00000637952 TCF24Q7RTU0 167 aa6.92□□□□□ -1.3
CACNA1A-254ENST00000637952 ARPC1AQ92747 370 aa6.92□□□□□ -1.3
CACNA1A-254ENST00000637952 FN1P02751 2386 aaKnown RBP6.92□□□□□ -1.3
CACNA1A-254ENST00000637952 E5RGE8 158 aa6.92□□□□□ -1.3
CACNA1A-254ENST00000637952 METTL15P1P0C7V9 234 aa6.92□□□□□ -1.3
CACNA1A-254ENST00000637952 BAXQ07812 192 aa6.92□□□□□ -1.3
CACNA1A-254ENST00000637952 CXorf66Q5JRM2 361 aaPredicted RBP6.92□□□□□ -1.3
CACNA1A-254ENST00000637952 ZNF664Q8N3J9 261 aa6.92□□□□□ -1.3
CACNA1A-254ENST00000637952 WDR89Q96FK6 387 aaPredicted RBP6.92□□□□□ -1.3
CACNA1A-254ENST00000637952 RAB40CQ96S21 281 aa6.92□□□□□ -1.3
CACNA1A-254ENST00000637952 AGMATQ9BSE5 352 aa6.92□□□□□ -1.3
CACNA1A-254ENST00000637952 TCF19Q9Y242 345 aa6.92□□□□□ -1.3
CACNA1A-254ENST00000637952 FAM181BA6NEQ2 426 aa6.91□□□□□ -1.3
CACNA1A-254ENST00000637952 AVPP01185 164 aa6.91□□□□□ -1.3
CACNA1A-254ENST00000637952 IGLV1-47P01700 117 aa6.91□□□□□ -1.3
CACNA1A-254ENST00000637952 MAS1LP35410 378 aa6.91□□□□□ -1.3
CACNA1A-254ENST00000637952 UBE2KP61086 200 aa6.91□□□□□ -1.3
CACNA1A-254ENST00000637952 SELENOTP62341 195 aa6.91□□□□□ -1.3
CACNA1A-254ENST00000637952 UTF1Q5T230 341 aa6.91□□□□□ -1.3
CACNA1A-254ENST00000637952 FAM71F2Q6NXP2 309 aa6.91□□□□□ -1.3
CACNA1A-254ENST00000637952 ZNF833PQ6ZTB9 187 aa6.91□□□□□ -1.3
CACNA1A-254ENST00000637952 SRSF12Q8WXF0 261 aaKnown RBP6.91□□□□□ -1.3
CACNA1A-254ENST00000637952 NARS2Q96I59 477 aaKnown RBP6.91□□□□□ -1.3
CACNA1A-254ENST00000637952 SOX21Q9Y651 276 aaPredicted RBP6.91□□□□□ -1.3
CACNA1A-254ENST00000637952 AP4M1O00189 453 aa6.91□□□□□ -1.3
CACNA1A-254ENST00000637952 GIPP09681 153 aaPredicted RBP6.91□□□□□ -1.3
CACNA1A-254ENST00000637952 RPL11P62913 178 aaKnown RBP6.91□□□□□ -1.3
CACNA1A-254ENST00000637952 EIF5AL1Q6IS14 154 aaKnown RBP6.91□□□□□ -1.3
CACNA1A-254ENST00000637952 TEX45Q8NA69 505 aa6.91□□□□□ -1.3
CACNA1A-254ENST00000637952 OR5M8Q8NGP6 311 aa6.91□□□□□ -1.3
CACNA1A-254ENST00000637952 OR1S2Q8NGQ3 325 aa6.91□□□□□ -1.3
CACNA1A-254ENST00000637952 PBDC1Q9BVG4 233 aa6.91□□□□□ -1.3
CACNA1A-254ENST00000637952 NDUFB8O95169 186 aa6.91□□□□□ -1.3
CACNA1A-254ENST00000637952 NPY1RP25929 384 aa6.91□□□□□ -1.3
CACNA1A-254ENST00000637952 CNTFRP26992 372 aa6.91□□□□□ -1.3
CACNA1A-254ENST00000637952 BTCP35070 178 aa6.91□□□□□ -1.3
CACNA1A-254ENST00000637952 DLX6P56179 175 aa6.91□□□□□ -1.3
CACNA1A-254ENST00000637952 C10orf55Q5SWW7 151 aa6.91□□□□□ -1.3
CACNA1A-254ENST00000637952 ZNF660Q6AZW8 331 aaPredicted RBP6.91□□□□□ -1.3
CACNA1A-254ENST00000637952 ZNF329Q86UD4 541 aa6.91□□□□□ -1.3
CACNA1A-254ENST00000637952 IL22RA2Q969J5 263 aa6.91□□□□□ -1.3
CACNA1A-254ENST00000637952 RNF5Q99942 180 aa6.91□□□□□ -1.3
CACNA1A-254ENST00000637952 C20orf24Q9BUV8 137 aa6.91□□□□□ -1.3
CACNA1A-254ENST00000637952 ZNF430Q9H8G1 570 aaPredicted RBP6.91□□□□□ -1.3
CACNA1A-254ENST00000637952 UBQLN2Q9UHD9 624 aa6.91□□□□□ -1.3
CACNA1A-254ENST00000637952 ANAPC10Q9UM13 185 aa6.91□□□□□ -1.3
CACNA1A-254ENST00000637952 SMG1Q96Q15 3661 aaKnown RBP6.91□□□□□ -1.3
CACNA1A-254ENST00000637952 A0A1W2PRX2 142 aa6.9□□□□□ -1.3
CACNA1A-254ENST00000637952 FAM24AA6NFZ4 105 aa6.9□□□□□ -1.3
CACNA1A-254ENST00000637952 UPK2O00526 184 aa6.9□□□□□ -1.3
CACNA1A-254ENST00000637952 TPPP2P59282 170 aa6.9□□□□□ -1.3
CACNA1A-254ENST00000637952 OR4X2Q8NGF9 303 aa6.9□□□□□ -1.3
CACNA1A-254ENST00000637952 OR5AN1Q8NGI8 311 aa6.9□□□□□ -1.3
CACNA1A-254ENST00000637952 LSM10Q969L4 123 aaKnown RBP6.9□□□□□ -1.3
CACNA1A-254ENST00000637952 FAM110AQ9BQ89 295 aa6.9□□□□□ -1.3
CACNA1A-254ENST00000637952 AURKAIP1Q9NWT8 199 aaPredicted RBP6.9□□□□□ -1.3
CACNA1A-254ENST00000637952 GNG7O60262 68 aa6.9□□□□□ -1.3
CACNA1A-254ENST00000637952 TRGV3P03979 118 aa6.9□□□□□ -1.3
CACNA1A-254ENST00000637952 RPL12P30050 165 aaKnown RBP6.9□□□□□ -1.3
CACNA1A-254ENST00000637952 CX3CL1P78423 397 aa6.9□□□□□ -1.3
CACNA1A-254ENST00000637952 PJVKQ0ZLH3 352 aa6.9□□□□□ -1.3
CACNA1A-254ENST00000637952 OR5B3Q8NH48 314 aa6.9□□□□□ -1.3
CACNA1A-254ENST00000637952 WNK1Q9H4A3 2382 aa6.9□□□□□ -1.31
CACNA1A-254ENST00000637952 IGHV3-48P01763 117 aa6.9□□□□□ -1.31
CACNA1A-254ENST00000637952 CXCL3P19876 107 aa6.9□□□□□ -1.31
CACNA1A-254ENST00000637952 HOXA5P20719 270 aa6.9□□□□□ -1.31
CACNA1A-254ENST00000637952 NPBWR1P48145 328 aa6.9□□□□□ -1.31
CACNA1A-254ENST00000637952 Q6ZPA2 131 aa6.9□□□□□ -1.31
CACNA1A-254ENST00000637952 C8orf31Q8N9H6 132 aa6.9□□□□□ -1.31
CACNA1A-254ENST00000637952 OR10C1Q96KK4 312 aa6.9□□□□□ -1.31
CACNA1A-254ENST00000637952 VPREB3Q9UKI3 123 aa6.9□□□□□ -1.31
CACNA1A-254ENST00000637952 SIGLEC9Q9Y336 463 aa6.9□□□□□ -1.31
CACNA1A-254ENST00000637952 TEP1Q99973 2627 aaKnown RBP6.89□□□□□ -1.31
CACNA1A-254ENST00000637952 PHOX2AO14813 284 aa6.89□□□□□ -1.31
CACNA1A-254ENST00000637952 OR2J3O76001 311 aa6.89□□□□□ -1.31
CACNA1A-254ENST00000637952 PRSS8Q16651 343 aa6.89□□□□□ -1.31
CACNA1A-254ENST00000637952 FBXO7Q9Y3I1 522 aa6.89□□□□□ -1.31
CACNA1A-254ENST00000637952 ITPR2Q14571 2701 aa6.89□□□□□ -1.31
CACNA1A-254ENST00000637952 OR9G9P0C7N8 305 aa6.89□□□□□ -1.31
CACNA1A-254ENST00000637952 MMP9P14780 707 aa6.89□□□□□ -1.31
CACNA1A-254ENST00000637952 TMEM177Q53S58 311 aa6.89□□□□□ -1.31
CACNA1A-254ENST00000637952 OR2C3Q8N628 320 aa6.89□□□□□ -1.31
CACNA1A-254ENST00000637952 HSD17B11Q8NBQ5 300 aa6.89□□□□□ -1.31
CACNA1A-254ENST00000637952 ZNF439Q8NDP4 499 aa6.89□□□□□ -1.31
CACNA1A-254ENST00000637952 P2RX4Q99571 388 aa6.89□□□□□ -1.31
CACNA1A-254ENST00000637952 RBKSQ9H477 322 aa6.89□□□□□ -1.31
CACNA1A-254ENST00000637952 CARHSP1Q9Y2V2 147 aaKnown RBP6.89□□□□□ -1.31
CACNA1A-254ENST00000637952 S4R3C0 116 aa6.89□□□□□ -1.31
CACNA1A-254ENST00000637952 TRAV3A0A0B4J244 114 aa6.89□□□□□ -1.31
CACNA1A-254ENST00000637952 TEX46H3BTG2 121 aa6.88□□□□□ -1.31
CACNA1A-254ENST00000637952 FBXO24O75426 580 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms