RNA–Protein interactions for RNA: ENST00000637537.1

CLN5-219, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 4

Gene CLN5, Length 2,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-219ENST00000637537 IMMP2LQ96T52 175 aa15.2■□□□□ 0.02
CLN5-219ENST00000637537 TMEM14BQ9NUH8 114 aa15.2■□□□□ 0.02
CLN5-219ENST00000637537 VPS13CQ709C8 3753 aa15.2■□□□□ 0.02
CLN5-219ENST00000637537 PLXNB1O43157 2135 aa15.2■□□□□ 0.02
CLN5-219ENST00000637537 DEFA4P12838 97 aa15.2■□□□□ 0.02
CLN5-219ENST00000637537 OR52E5Q8NH55 327 aa15.2■□□□□ 0.02
CLN5-219ENST00000637537 FLNCQ14315 2725 aa15.2■□□□□ 0.02
CLN5-219ENST00000637537 HMGB3O15347 200 aaKnown RBP15.19■□□□□ 0.02
CLN5-219ENST00000637537 ACSM6Q6P461 480 aa15.19■□□□□ 0.02
CLN5-219ENST00000637537 ZNF705AQ6ZN79 300 aaPredicted RBP15.19■□□□□ 0.02
CLN5-219ENST00000637537 RPUSD4Q96CM3 377 aaKnown RBP15.19■□□□□ 0.02
CLN5-219ENST00000637537 H0YJW9 148 aa15.19■□□□□ 0.02
CLN5-219ENST00000637537 SAA1P0DJI8 122 aaPredicted RBP15.19■□□□□ 0.02
CLN5-219ENST00000637537 ARSJQ5FYB0 599 aaPredicted RBP15.19■□□□□ 0.02
CLN5-219ENST00000637537 C20orf144Q9BQM9 153 aa15.19■□□□□ 0.02
CLN5-219ENST00000637537 CACNA1BQ00975 2339 aa15.19■□□□□ 0.02
CLN5-219ENST00000637537 BRS3P32247 399 aa15.18■□□□□ 0.02
CLN5-219ENST00000637537 ATP6V1FQ16864 119 aa15.18■□□□□ 0.02
CLN5-219ENST00000637537 NPCDR1Q9BY65 106 aa15.18■□□□□ 0.02
CLN5-219ENST00000637537 RAB1BQ9H0U4 201 aa15.18■□□□□ 0.02
CLN5-219ENST00000637537 PARLQ9H300 379 aa15.18■□□□□ 0.02
CLN5-219ENST00000637537 LPAR2Q9HBW0 351 aa15.18■□□□□ 0.02
CLN5-219ENST00000637537 FOXA2Q9Y261 457 aaPredicted RBP15.18■□□□□ 0.02
CLN5-219ENST00000637537 OR51B2Q9Y5P1 312 aa15.18■□□□□ 0.02
CLN5-219ENST00000637537 RPL15P61313 204 aaKnown RBP15.18■□□□□ 0.02
CLN5-219ENST00000637537 LCN2P80188 198 aa15.18■□□□□ 0.02
CLN5-219ENST00000637537 C11orf71Q6IPW1 123 aa15.18■□□□□ 0.02
CLN5-219ENST00000637537 RPP25LQ8N5L8 163 aaKnown RBP15.18■□□□□ 0.02
CLN5-219ENST00000637537 ITLN2Q8WWU7 325 aaPredicted RBP15.18■□□□□ 0.02
CLN5-219ENST00000637537 HARBI1Q96MB7 349 aa15.18■□□□□ 0.02
CLN5-219ENST00000637537 TBX15Q96SF7 602 aa15.18■□□□□ 0.02
CLN5-219ENST00000637537 PARD6GQ9BYG4 376 aaPredicted RBP15.18■□□□□ 0.02
CLN5-219ENST00000637537 C19orf84I3L1E1 186 aa15.17■□□□□ 0.02
CLN5-219ENST00000637537 HSPE1P61604 102 aaKnown RBP15.17■□□□□ 0.02
CLN5-219ENST00000637537 PDLIM3Q53GG5 364 aaPredicted RBP15.17■□□□□ 0.02
CLN5-219ENST00000637537 LHX4Q969G2 390 aa15.17■□□□□ 0.02
CLN5-219ENST00000637537 MS4A10Q96PG2 267 aa15.17■□□□□ 0.02
CLN5-219ENST00000637537 MIEN1Q9BRT3 115 aa15.17■□□□□ 0.02
CLN5-219ENST00000637537 ZFYVE26Q68DK2 2539 aa15.17■□□□□ 0.02
CLN5-219ENST00000637537 IGHV3-72A0A0B4J1Y9 119 aa15.17■□□□□ 0.02
CLN5-219ENST00000637537 CD1BP29016 333 aa15.17■□□□□ 0.02
CLN5-219ENST00000637537 TMEM256Q8N2U0 113 aa15.17■□□□□ 0.02
CLN5-219ENST00000637537 OR5AN1Q8NGI8 311 aa15.17■□□□□ 0.02
CLN5-219ENST00000637537 OR9G1Q8NH87 305 aa15.17■□□□□ 0.02
CLN5-219ENST00000637537 ST6GALNAC6Q969X2 333 aa15.17■□□□□ 0.02
CLN5-219ENST00000637537 TMEM133Q9H2Q1 129 aa15.17■□□□□ 0.02
CLN5-219ENST00000637537 APOA2P02652 100 aa15.16■□□□□ 0.02
CLN5-219ENST00000637537 CDKN1AP38936 164 aa15.16■□□□□ 0.02
CLN5-219ENST00000637537 POU2AF1Q16633 256 aa15.16■□□□□ 0.02
CLN5-219ENST00000637537 VWC2Q2TAL6 325 aa15.16■□□□□ 0.02
CLN5-219ENST00000637537 SLC39A9Q9NUM3 307 aa15.16■□□□□ 0.02
CLN5-219ENST00000637537 UPK2O00526 184 aa15.16■□□□□ 0.02
CLN5-219ENST00000637537 NUPR1O60356 82 aa15.16■□□□□ 0.02
CLN5-219ENST00000637537 NDUFS7O75251 213 aa15.16■□□□□ 0.02
CLN5-219ENST00000637537 NABP2Q9BQ15 211 aa15.16■□□□□ 0.02
CLN5-219ENST00000637537 PPIAL4CA0A0B4J2A2 164 aa15.15■□□□□ 0.02
CLN5-219ENST00000637537 ZNF705FA8MVS1 300 aaPredicted RBP15.15■□□□□ 0.02
CLN5-219ENST00000637537 IL6RP08887 468 aaPredicted RBP15.15■□□□□ 0.02
CLN5-219ENST00000637537 ZNF705DP0CH99 300 aaPredicted RBP15.15■□□□□ 0.02
CLN5-219ENST00000637537 ZNF705BP0CI00 300 aaPredicted RBP15.15■□□□□ 0.02
CLN5-219ENST00000637537 PPIAL4GP0DN37 164 aa15.15■□□□□ 0.02
CLN5-219ENST00000637537 TEX43Q6ZNM6 134 aa15.15■□□□□ 0.02
CLN5-219ENST00000637537 TMEM186Q96B77 213 aa15.15■□□□□ 0.02
CLN5-219ENST00000637537 RITA1Q96K30 269 aa15.15■□□□□ 0.02
CLN5-219ENST00000637537 SLC25A22Q9H936 323 aa15.15■□□□□ 0.02
CLN5-219ENST00000637537 PRSS46E5RG02 174 aa15.15■□□□□ 0.02
CLN5-219ENST00000637537 IL3RAP26951 378 aa15.15■□□□□ 0.02
CLN5-219ENST00000637537 PSMB3P49720 205 aa15.15■□□□□ 0.02
CLN5-219ENST00000637537 FFAR4Q5NUL3 377 aa15.15■□□□□ 0.02
CLN5-219ENST00000637537 KCNIP4Q6PIL6 250 aa15.15■□□□□ 0.02
CLN5-219ENST00000637537 FLYWCH2Q96CP2 140 aaKnown RBP15.15■□□□□ 0.02
CLN5-219ENST00000637537 PXMP4Q9Y6I8 212 aa15.15■□□□□ 0.02
CLN5-219ENST00000637537 IGHV2-26A0A0B4J1V2 119 aa15.14■□□□□ 0.01
CLN5-219ENST00000637537 VENTXO95231 258 aa15.14■□□□□ 0.01
CLN5-219ENST00000637537 CA2P00918 260 aa15.14■□□□□ 0.01
CLN5-219ENST00000637537 RPP30P78346 268 aaKnown RBP15.14■□□□□ 0.01
CLN5-219ENST00000637537 GCSAMLQ5JQS6 135 aa15.14■□□□□ 0.01
CLN5-219ENST00000637537 DMRTA1Q5VZB9 504 aa15.14■□□□□ 0.01
CLN5-219ENST00000637537 LINC00311Q8N616 119 aa15.14■□□□□ 0.01
CLN5-219ENST00000637537 Q8N7P7 452 aa15.14■□□□□ 0.01
CLN5-219ENST00000637537 SLC24A4Q8NFF2 622 aa15.14■□□□□ 0.01
CLN5-219ENST00000637537 OR10W1Q8NGF6 305 aa15.14■□□□□ 0.01
CLN5-219ENST00000637537 ZNF596Q8TC21 504 aa15.14■□□□□ 0.01
CLN5-219ENST00000637537 NAV3Q8IVL0 2385 aa15.14■□□□□ 0.01
CLN5-219ENST00000637537 WNK2Q9Y3S1 2297 aa15.14■□□□□ 0.01
CLN5-219ENST00000637537 TEX50A0A1B0GTY4 177 aa15.14■□□□□ 0.01
CLN5-219ENST00000637537 COX7A1P24310 79 aa15.14■□□□□ 0.01
CLN5-219ENST00000637537 ENY2Q9NPA8 101 aa15.14■□□□□ 0.01
CLN5-219ENST00000637537 PRNDQ9UKY0 176 aa15.14■□□□□ 0.01
CLN5-219ENST00000637537 TIMM9Q9Y5J7 89 aa15.14■□□□□ 0.01
CLN5-219ENST00000637537 A0A1B0GUS0 222 aa15.13■□□□□ 0.01
CLN5-219ENST00000637537 E7EUB6 86 aa15.13■□□□□ 0.01
CLN5-219ENST00000637537 NPY1RP25929 384 aa15.13■□□□□ 0.01
CLN5-219ENST00000637537 TREML4Q6UXN2 200 aa15.13■□□□□ 0.01
CLN5-219ENST00000637537 TMEM144Q7Z5S9 345 aa15.13■□□□□ 0.01
CLN5-219ENST00000637537 ZNF709Q8N972 641 aa15.13■□□□□ 0.01
CLN5-219ENST00000637537 OR8B3Q8NGG8 313 aa15.13■□□□□ 0.01
CLN5-219ENST00000637537 OSR1Q8TAX0 266 aaPredicted RBP15.13■□□□□ 0.01
CLN5-219ENST00000637537 OR8B2Q96RD0 313 aa15.13■□□□□ 0.01
CLN5-219ENST00000637537 UTP20O75691 2785 aaKnown RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms