RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 SPACA3Q8IXA5 215 aa12.81□□□□□ -0.36
CACNA1A-235ENST00000637004 ZZEF1O43149 2961 aa12.81□□□□□ -0.36
CACNA1A-235ENST00000637004 A0A1W2PRE2 83 aa12.81□□□□□ -0.36
CACNA1A-235ENST00000637004 KIR2DS2P43631 304 aa12.81□□□□□ -0.36
CACNA1A-235ENST00000637004 TMEM95Q3KNT9 176 aa12.81□□□□□ -0.36
CACNA1A-235ENST00000637004 ACP7Q6ZNF0 438 aa12.81□□□□□ -0.36
CACNA1A-235ENST00000637004 Q6ZR03 302 aa12.81□□□□□ -0.36
CACNA1A-235ENST00000637004 TPRX1Q8N7U7 411 aa12.81□□□□□ -0.36
CACNA1A-235ENST00000637004 NABP2Q9BQ15 211 aa12.81□□□□□ -0.36
CACNA1A-235ENST00000637004 OBP2BQ9NPH6 170 aa12.81□□□□□ -0.36
CACNA1A-235ENST00000637004 GNG12Q9UBI6 72 aa12.81□□□□□ -0.36
CACNA1A-235ENST00000637004 LOXL2Q9Y4K0 774 aa12.81□□□□□ -0.36
CACNA1A-235ENST00000637004 CACNA1DQ01668 2161 aa12.81□□□□□ -0.36
CACNA1A-235ENST00000637004 OR7C2O60412 319 aa12.8□□□□□ -0.36
CACNA1A-235ENST00000637004 PROP1O75360 226 aa12.8□□□□□ -0.36
CACNA1A-235ENST00000637004 EBLN2Q6P2I7 272 aa12.8□□□□□ -0.36
CACNA1A-235ENST00000637004 LHFPL4Q7Z7J7 247 aa12.8□□□□□ -0.36
CACNA1A-235ENST00000637004 IGF2BP2-AS1Q96M15 143 aa12.8□□□□□ -0.36
CACNA1A-235ENST00000637004 C19orf24Q9BVV8 132 aa12.8□□□□□ -0.36
CACNA1A-235ENST00000637004 TRAV3A0A0B4J244 114 aa12.8□□□□□ -0.36
CACNA1A-235ENST00000637004 RHOGP84095 191 aa12.8□□□□□ -0.36
CACNA1A-235ENST00000637004 ALKBH6Q3KRA9 238 aa12.8□□□□□ -0.36
CACNA1A-235ENST00000637004 NEUROG1Q92886 237 aa12.8□□□□□ -0.36
CACNA1A-235ENST00000637004 TNFRSF14Q92956 283 aa12.8□□□□□ -0.36
CACNA1A-235ENST00000637004 OR2V2Q96R30 315 aa12.8□□□□□ -0.36
CACNA1A-235ENST00000637004 FAM234AQ9H0X4 552 aa12.8□□□□□ -0.36
CACNA1A-235ENST00000637004 IGF2RP11717 2491 aa12.8□□□□□ -0.36
CACNA1A-235ENST00000637004 C15orf61A6NNL5 157 aa12.8□□□□□ -0.36
CACNA1A-235ENST00000637004 GGTLC3B5MD39 225 aa12.8□□□□□ -0.36
CACNA1A-235ENST00000637004 C15orf65H3BRN8 121 aa12.8□□□□□ -0.36
CACNA1A-235ENST00000637004 LTC4SQ16873 150 aa12.8□□□□□ -0.36
CACNA1A-235ENST00000637004 ZNF826PQ6ZT77 177 aa12.8□□□□□ -0.36
CACNA1A-235ENST00000637004 SLC25A40Q8TBP6 338 aa12.8□□□□□ -0.36
CACNA1A-235ENST00000637004 TRIB1Q96RU8 372 aa12.8□□□□□ -0.36
CACNA1A-235ENST00000637004 CSTL1Q9H114 145 aa12.8□□□□□ -0.36
CACNA1A-235ENST00000637004 C12orf49Q9H741 205 aa12.8□□□□□ -0.36
CACNA1A-235ENST00000637004 MFAP2P55001 183 aa12.79□□□□□ -0.36
CACNA1A-235ENST00000637004 ARG2P78540 354 aa12.79□□□□□ -0.36
CACNA1A-235ENST00000637004 FAM162BQ5T6X4 162 aa12.79□□□□□ -0.36
CACNA1A-235ENST00000637004 RNASEKQ6P5S7 137 aaKnown RBP12.79□□□□□ -0.36
CACNA1A-235ENST00000637004 CXorf67Q86X51 503 aaPredicted RBP12.79□□□□□ -0.36
CACNA1A-235ENST00000637004 ST20Q9HBF5 79 aa12.79□□□□□ -0.36
CACNA1A-235ENST00000637004 C2orf70A6NJV1 201 aa12.79□□□□□ -0.36
CACNA1A-235ENST00000637004 HSPE1P61604 102 aaKnown RBP12.79□□□□□ -0.36
CACNA1A-235ENST00000637004 OR4S2Q8NH73 311 aa12.79□□□□□ -0.36
CACNA1A-235ENST00000637004 NUDT11Q96G61 164 aa12.79□□□□□ -0.36
CACNA1A-235ENST00000637004 TMEM70Q9BUB7 260 aa12.79□□□□□ -0.36
CACNA1A-235ENST00000637004 TNFRSF19Q9NS68 423 aa12.79□□□□□ -0.36
CACNA1A-235ENST00000637004 JPT1Q9UK76 154 aa12.79□□□□□ -0.36
CACNA1A-235ENST00000637004 SMIM21Q3B7S5 101 aa12.78□□□□□ -0.36
CACNA1A-235ENST00000637004 FAM214BQ7L5A3 538 aa12.78□□□□□ -0.36
CACNA1A-235ENST00000637004 CA1P00915 261 aaPredicted RBP12.78□□□□□ -0.36
CACNA1A-235ENST00000637004 C11orf53Q8IXP5 236 aa12.78□□□□□ -0.36
CACNA1A-235ENST00000637004 ZNF503Q96F45 646 aa12.78□□□□□ -0.36
CACNA1A-235ENST00000637004 VPS25Q9BRG1 176 aa12.78□□□□□ -0.36
CACNA1A-235ENST00000637004 FOXA2Q9Y261 457 aaPredicted RBP12.78□□□□□ -0.36
CACNA1A-235ENST00000637004 OR2J3O76001 311 aa12.77□□□□□ -0.36
CACNA1A-235ENST00000637004 COL8A2P25067 703 aa12.77□□□□□ -0.36
CACNA1A-235ENST00000637004 MAGEA5P43359 124 aa12.77□□□□□ -0.36
CACNA1A-235ENST00000637004 FAM231DQ6ZW35 169 aa12.77□□□□□ -0.36
CACNA1A-235ENST00000637004 ZNF596Q8TC21 504 aa12.77□□□□□ -0.36
CACNA1A-235ENST00000637004 CHRDL1Q9BU40 450 aa12.77□□□□□ -0.36
CACNA1A-235ENST00000637004 CXXC4Q9H2H0 198 aa12.77□□□□□ -0.36
CACNA1A-235ENST00000637004 AHRRA9YTQ3 701 aa12.77□□□□□ -0.37
CACNA1A-235ENST00000637004 CELA3BP08861 270 aa12.77□□□□□ -0.37
CACNA1A-235ENST00000637004 TFF1P04155 84 aa12.76□□□□□ -0.37
CACNA1A-235ENST00000637004 RPL39P5Q59GN2 51 aa12.76□□□□□ -0.37
CACNA1A-235ENST00000637004 DHRS13Q6UX07 377 aa12.76□□□□□ -0.37
CACNA1A-235ENST00000637004 GRAMD2BQ96HH9 432 aa12.76□□□□□ -0.37
CACNA1A-235ENST00000637004 DCTN5Q9BTE1 182 aa12.76□□□□□ -0.37
CACNA1A-235ENST00000637004 SSBP3Q9BWW4 388 aaPredicted RBP12.76□□□□□ -0.37
CACNA1A-235ENST00000637004 TMEM14BQ9NUH8 114 aa12.76□□□□□ -0.37
CACNA1A-235ENST00000637004 METRNQ9UJH8 293 aa12.76□□□□□ -0.37
CACNA1A-235ENST00000637004 TOX4O94842 621 aa12.76□□□□□ -0.37
CACNA1A-235ENST00000637004 EDDM3AQ14507 147 aa12.76□□□□□ -0.37
CACNA1A-235ENST00000637004 FAM168AQ92567 244 aa12.76□□□□□ -0.37
CACNA1A-235ENST00000637004 MBD6Q96DN6 1003 aa12.76□□□□□ -0.37
CACNA1A-235ENST00000637004 PLPPR2Q96GM1 343 aa12.76□□□□□ -0.37
CACNA1A-235ENST00000637004 TTTY12Q9BZ98 90 aa12.76□□□□□ -0.37
CACNA1A-235ENST00000637004 CST9LQ9H4G1 147 aa12.76□□□□□ -0.37
CACNA1A-235ENST00000637004 C1RLQ9NZP8 487 aa12.76□□□□□ -0.37
CACNA1A-235ENST00000637004 CLCF1Q9UBD9 225 aa12.76□□□□□ -0.37
CACNA1A-235ENST00000637004 RNF24Q9Y225 148 aa12.76□□□□□ -0.37
CACNA1A-235ENST00000637004 NTN3O00634 580 aaPredicted RBP12.75□□□□□ -0.37
CACNA1A-235ENST00000637004 C8orf88P0DMB2 117 aa12.75□□□□□ -0.37
CACNA1A-235ENST00000637004 RPL8P62917 257 aaKnown RBP12.75□□□□□ -0.37
CACNA1A-235ENST00000637004 MPV17L2Q567V2 206 aa12.75□□□□□ -0.37
CACNA1A-235ENST00000637004 WDR82Q6UXN9 313 aa12.75□□□□□ -0.37
CACNA1A-235ENST00000637004 NUP35Q8NFH5 326 aa12.75□□□□□ -0.37
CACNA1A-235ENST00000637004 ZNF355PQ9NSJ1 428 aa12.75□□□□□ -0.37
CACNA1A-235ENST00000637004 OR4C46A6NHA9 309 aa12.75□□□□□ -0.37
CACNA1A-235ENST00000637004 OCIAD2Q56VL3 154 aa12.75□□□□□ -0.37
CACNA1A-235ENST00000637004 LDLRAD2Q5SZI1 272 aa12.75□□□□□ -0.37
CACNA1A-235ENST00000637004 C12orf54Q6X4T0 127 aa12.75□□□□□ -0.37
CACNA1A-235ENST00000637004 FAM90A1Q86YD7 464 aa12.75□□□□□ -0.37
CACNA1A-235ENST00000637004 KLF14Q8TD94 323 aaPredicted RBP12.75□□□□□ -0.37
CACNA1A-235ENST00000637004 DUSP13Q9UII6 198 aa12.75□□□□□ -0.37
CACNA1A-235ENST00000637004 WASHC3Q9Y3C0 194 aa12.75□□□□□ -0.37
CACNA1A-235ENST00000637004 MGAQ8IWI9 3026 aa12.75□□□□□ -0.37
CACNA1A-235ENST00000637004 DSPP15924 2871 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms