RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 PYYP10082 97 aa14.94□□□□□ -0.02
CACNA1A-227ENST00000636549 PAPPA-AS1Q5QFB9 102 aa14.94□□□□□ -0.02
CACNA1A-227ENST00000636549 MBD3L2Q8NHZ7 208 aaPredicted RBP14.94□□□□□ -0.02
CACNA1A-227ENST00000636549 OR10W1Q8NGF6 305 aa14.94□□□□□ -0.02
CACNA1A-227ENST00000636549 SPRR3Q9UBC9 169 aa14.94□□□□□ -0.02
CACNA1A-227ENST00000636549 DMRT1Q9Y5R6 373 aa14.94□□□□□ -0.02
CACNA1A-227ENST00000636549 TMEM8BA6NDV4 472 aa14.94□□□□□ -0.02
CACNA1A-227ENST00000636549 CD300EQ496F6 205 aaPredicted RBP14.94□□□□□ -0.02
CACNA1A-227ENST00000636549 COL22A1Q8NFW1 1626 aaPredicted RBP14.94□□□□□ -0.02
CACNA1A-227ENST00000636549 F8WEM9 126 aa14.93□□□□□ -0.02
CACNA1A-227ENST00000636549 MBNL3Q9NUK0 354 aaKnown RBP14.93□□□□□ -0.02
CACNA1A-227ENST00000636549 SCAND1P57086 179 aa14.93□□□□□ -0.02
CACNA1A-227ENST00000636549 SP5Q6BEB4 398 aaPredicted RBP14.93□□□□□ -0.02
CACNA1A-227ENST00000636549 SLC25A2Q9BXI2 301 aa14.93□□□□□ -0.02
CACNA1A-227ENST00000636549 PRSS23O95084 383 aa14.93□□□□□ -0.02
CACNA1A-227ENST00000636549 FNDC4Q9H6D8 234 aaPredicted RBP14.93□□□□□ -0.02
CACNA1A-227ENST00000636549 C12orf77C9JDV5 145 aa14.93□□□□□ -0.02
CACNA1A-227ENST00000636549 H3BUX3 64 aa14.93□□□□□ -0.02
CACNA1A-227ENST00000636549 HLA-DQA1P01909 254 aa14.93□□□□□ -0.02
CACNA1A-227ENST00000636549 NDUFS5O43920 106 aa14.93□□□□□ -0.02
CACNA1A-227ENST00000636549 PAX8Q06710 450 aa14.93□□□□□ -0.02
CACNA1A-227ENST00000636549 AQP3Q92482 292 aa14.93□□□□□ -0.02
CACNA1A-227ENST00000636549 GLRXP35754 106 aa14.93□□□□□ -0.02
CACNA1A-227ENST00000636549 SERF2P84101 59 aa14.93□□□□□ -0.02
CACNA1A-227ENST00000636549 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.92□□□□□ -0.02
CACNA1A-227ENST00000636549 RND3P61587 244 aa14.92□□□□□ -0.02
CACNA1A-227ENST00000636549 SP7Q8TDD2 431 aaPredicted RBP14.92□□□□□ -0.02
CACNA1A-227ENST00000636549 FOXD3Q9UJU5 478 aaPredicted RBP14.92□□□□□ -0.02
CACNA1A-227ENST00000636549 KIAA1551Q9HCM1 1747 aa14.92□□□□□ -0.02
CACNA1A-227ENST00000636549 PRB2P02812 416 aaPredicted RBP14.92□□□□□ -0.02
CACNA1A-227ENST00000636549 RNF182Q8N6D2 247 aa14.92□□□□□ -0.02
CACNA1A-227ENST00000636549 PKIBQ9C010 78 aa14.92□□□□□ -0.02
CACNA1A-227ENST00000636549 MYOD1P15172 320 aa14.92□□□□□ -0.02
CACNA1A-227ENST00000636549 HMGA2P52926 109 aa14.92□□□□□ -0.02
CACNA1A-227ENST00000636549 PSG7Q13046 419 aa14.92□□□□□ -0.02
CACNA1A-227ENST00000636549 LBHQ53QV2 105 aaPredicted RBP14.92□□□□□ -0.02
CACNA1A-227ENST00000636549 PILRAQ9UKJ1 303 aa14.92□□□□□ -0.02
CACNA1A-227ENST00000636549 ZNF257Q9Y2Q1 563 aa14.92□□□□□ -0.02
CACNA1A-227ENST00000636549 CD55P08174 381 aa14.92□□□□□ -0.02
CACNA1A-227ENST00000636549 PAX1P15863 534 aa14.92□□□□□ -0.02
CACNA1A-227ENST00000636549 OR2K2Q8NGT1 345 aa14.92□□□□□ -0.02
CACNA1A-227ENST00000636549 IGKV1D-43A0A0B4J1Z2 117 aa14.92□□□□□ -0.02
CACNA1A-227ENST00000636549 ZNF525Q8N782 197 aa14.91□□□□□ -0.02
CACNA1A-227ENST00000636549 WDYHV1Q96HA8 205 aa14.91□□□□□ -0.02
CACNA1A-227ENST00000636549 TRAV13-1A0A0B4J241 112 aa14.91□□□□□ -0.02
CACNA1A-227ENST00000636549 PET117Q6UWS5 81 aa14.91□□□□□ -0.02
CACNA1A-227ENST00000636549 ZNF114Q8NC26 417 aa14.91□□□□□ -0.02
CACNA1A-227ENST00000636549 C5orf66Q9H5L9 145 aa14.91□□□□□ -0.02
CACNA1A-227ENST00000636549 RAMP3O60896 148 aa14.91□□□□□ -0.02
CACNA1A-227ENST00000636549 IGLV2-23P01705 113 aa14.91□□□□□ -0.02
CACNA1A-227ENST00000636549 DMRTC2Q8IXT2 367 aaPredicted RBP14.91□□□□□ -0.02
CACNA1A-227ENST00000636549 GSN-AS1Q9NRJ2 163 aa14.91□□□□□ -0.02
CACNA1A-227ENST00000636549 TOMM40O96008 361 aa14.91□□□□□ -0.02
CACNA1A-227ENST00000636549 COQ2Q96H96 371 aa14.91□□□□□ -0.02
CACNA1A-227ENST00000636549 TPRP12270 2363 aaKnown RBP14.91□□□□□ -0.02
CACNA1A-227ENST00000636549 NPCDR1Q9BY65 106 aa14.91□□□□□ -0.02
CACNA1A-227ENST00000636549 NPIPB13A6NJU9 1138 aa14.9□□□□□ -0.02
CACNA1A-227ENST00000636549 NPIPB5A8MRT5 1133 aa14.9□□□□□ -0.02
CACNA1A-227ENST00000636549 KBTBD11-OT1A0A1B0GTJ5 212 aa14.9□□□□□ -0.02
CACNA1A-227ENST00000636549 FUT5Q11128 374 aa14.9□□□□□ -0.02
CACNA1A-227ENST00000636549 CHTOPQ9Y3Y2 248 aaKnown RBP14.9□□□□□ -0.02
CACNA1A-227ENST00000636549 PINLYPA6NC86 204 aa14.9□□□□□ -0.02
CACNA1A-227ENST00000636549 MRPL32Q9BYC8 188 aaKnown RBP14.9□□□□□ -0.02
CACNA1A-227ENST00000636549 CLPSL1A2RUU4 121 aa14.9□□□□□ -0.02
CACNA1A-227ENST00000636549 CCL1P22362 96 aa14.9□□□□□ -0.02
CACNA1A-227ENST00000636549 PIP4P2Q8N4L2 257 aa14.89□□□□□ -0.03
CACNA1A-227ENST00000636549 PLAC1Q9HBJ0 212 aa14.89□□□□□ -0.03
CACNA1A-227ENST00000636549 DEPPQ9NTK1 212 aa14.89□□□□□ -0.03
CACNA1A-227ENST00000636549 NCR2O95944 276 aa14.89□□□□□ -0.03
CACNA1A-227ENST00000636549 KLF17Q5JT82 389 aaPredicted RBP14.89□□□□□ -0.03
CACNA1A-227ENST00000636549 SDHCQ99643 169 aaPredicted RBP14.89□□□□□ -0.03
CACNA1A-227ENST00000636549 MESP1Q9BRJ9 268 aa14.89□□□□□ -0.03
CACNA1A-227ENST00000636549 IGLV1-36A0A0B4J1U3 117 aa14.89□□□□□ -0.03
CACNA1A-227ENST00000636549 TRAV5A0A0B4J249 113 aa14.89□□□□□ -0.03
CACNA1A-227ENST00000636549 F8VVB4 439 aa14.89□□□□□ -0.03
CACNA1A-227ENST00000636549 F8VWA3 439 aa14.89□□□□□ -0.03
CACNA1A-227ENST00000636549 NEUROG1Q92886 237 aa14.89□□□□□ -0.03
CACNA1A-227ENST00000636549 RPP21Q9H633 154 aaKnown RBP14.89□□□□□ -0.03
CACNA1A-227ENST00000636549 SPCS1Q9Y6A9 102 aa14.89□□□□□ -0.03
CACNA1A-227ENST00000636549 BCORQ6W2J9 1755 aa14.89□□□□□ -0.03
CACNA1A-227ENST00000636549 KNCNA6PVL3 124 aa14.89□□□□□ -0.03
CACNA1A-227ENST00000636549 GATAD1Q8WUU5 269 aa14.89□□□□□ -0.03
CACNA1A-227ENST00000636549 TMEM187Q14656 261 aa14.88□□□□□ -0.03
CACNA1A-227ENST00000636549 NHSL1Q5SYE7 1610 aa14.88□□□□□ -0.03
CACNA1A-227ENST00000636549 A0A087WWL8 130 aa14.88□□□□□ -0.03
CACNA1A-227ENST00000636549 TRAV41A0A0B4J266 112 aa14.88□□□□□ -0.03
CACNA1A-227ENST00000636549 HIGD1CA8MV81 97 aa14.88□□□□□ -0.03
CACNA1A-227ENST00000636549 UQCR10Q9UDW1 63 aa14.88□□□□□ -0.03
CACNA1A-227ENST00000636549 RREB1Q92766 1687 aa14.88□□□□□ -0.03
CACNA1A-227ENST00000636549 GGTLC3B5MD39 225 aa14.88□□□□□ -0.03
CACNA1A-227ENST00000636549 C1orf159Q96HA4 380 aa14.88□□□□□ -0.03
CACNA1A-227ENST00000636549 G6PC2Q9NQR9 355 aa14.88□□□□□ -0.03
CACNA1A-227ENST00000636549 F5P12259 2224 aa14.88□□□□□ -0.03
CACNA1A-227ENST00000636549 NHP2Q9NX24 153 aaKnown RBP14.88□□□□□ -0.03
CACNA1A-227ENST00000636549 GCM2O75603 506 aaPredicted RBP14.87□□□□□ -0.03
CACNA1A-227ENST00000636549 FMC1Q96HJ9 113 aa14.87□□□□□ -0.03
CACNA1A-227ENST00000636549 NAA38Q9BRA0 125 aaKnown RBP14.87□□□□□ -0.03
CACNA1A-227ENST00000636549 RPUSD1Q9UJJ7 312 aaKnown RBP14.87□□□□□ -0.03
CACNA1A-227ENST00000636549 RGPD3A6NKT7 1758 aaPredicted RBP14.87□□□□□ -0.03
CACNA1A-227ENST00000636549 PLA2G10O15496 165 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms