RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 EDA2RQ9HAV5 297 aa13.83□□□□□ -0.2
CLN6-214ENST00000636314 MRPL27Q9P0M9 148 aaKnown RBP13.83□□□□□ -0.2
CLN6-214ENST00000636314 HYDINQ4G0P3 5121 aa13.83□□□□□ -0.2
CLN6-214ENST00000636314 TEX13DA0A0J9YY54 714 aaPredicted RBP13.82□□□□□ -0.2
CLN6-214ENST00000636314 ANKRD20A5PA0PJZ0 165 aa13.82□□□□□ -0.2
CLN6-214ENST00000636314 FABP12A6NFH5 140 aa13.82□□□□□ -0.2
CLN6-214ENST00000636314 F8W735 103 aaPredicted RBP13.82□□□□□ -0.2
CLN6-214ENST00000636314 NDUFA4O00483 81 aa13.82□□□□□ -0.2
CLN6-214ENST00000636314 ST8SIA3O43173 380 aa13.82□□□□□ -0.2
CLN6-214ENST00000636314 IFNA17P01571 189 aa13.82□□□□□ -0.2
CLN6-214ENST00000636314 OR5AC1P0C628 307 aa13.82□□□□□ -0.2
CLN6-214ENST00000636314 TNFSF8P32971 234 aa13.82□□□□□ -0.2
CLN6-214ENST00000636314 SLC16A13Q7RTY0 426 aa13.82□□□□□ -0.2
CLN6-214ENST00000636314 OR51S1Q8NGJ8 323 aa13.82□□□□□ -0.2
CLN6-214ENST00000636314 CHRDL1Q9BU40 450 aa13.82□□□□□ -0.2
CLN6-214ENST00000636314 C5orf66Q9H5L9 145 aa13.82□□□□□ -0.2
CLN6-214ENST00000636314 NAA60Q9H7X0 242 aa13.82□□□□□ -0.2
CLN6-214ENST00000636314 DAZ1Q9NQZ3 744 aaKnown RBP13.82□□□□□ -0.2
CLN6-214ENST00000636314 CEPT1Q9Y6K0 416 aa13.82□□□□□ -0.2
CLN6-214ENST00000636314 A0A0B4J293 547 aa13.81□□□□□ -0.2
CLN6-214ENST00000636314 SCAF4O95104 1147 aaKnown RBP13.81□□□□□ -0.2
CLN6-214ENST00000636314 C8orf88P0DMB2 117 aa13.81□□□□□ -0.2
CLN6-214ENST00000636314 HOXA1P49639 335 aaPredicted RBP13.81□□□□□ -0.2
CLN6-214ENST00000636314 HAGHQ16775 308 aa13.81□□□□□ -0.2
CLN6-214ENST00000636314 PINX1Q96BK5 328 aaKnown RBP13.81□□□□□ -0.2
CLN6-214ENST00000636314 SPATA25Q9BR10 227 aa13.81□□□□□ -0.2
CLN6-214ENST00000636314 RTBDNQ9BSG5 229 aaPredicted RBP13.81□□□□□ -0.2
CLN6-214ENST00000636314 C20orf24Q9BUV8 137 aa13.81□□□□□ -0.2
CLN6-214ENST00000636314 NXF2Q9GZY0 626 aaKnown RBP13.81□□□□□ -0.2
CLN6-214ENST00000636314 TMEM222Q9H0R3 208 aa13.81□□□□□ -0.2
CLN6-214ENST00000636314 WFDC10AQ9H1F0 79 aa13.81□□□□□ -0.2
CLN6-214ENST00000636314 I3L2K1 104 aa13.8□□□□□ -0.2
CLN6-214ENST00000636314 NUPL2O15504 423 aaKnown RBP13.8□□□□□ -0.2
CLN6-214ENST00000636314 MT-CO2P00403 227 aa13.8□□□□□ -0.2
CLN6-214ENST00000636314 ADMP35318 185 aa13.8□□□□□ -0.2
CLN6-214ENST00000636314 SNCAP37840 140 aa13.8□□□□□ -0.2
CLN6-214ENST00000636314 MFAP4P55083 255 aa13.8□□□□□ -0.2
CLN6-214ENST00000636314 RBPMS2Q6ZRY4 209 aaKnown RBP13.8□□□□□ -0.2
CLN6-214ENST00000636314 DEFB125Q8N687 156 aa13.8□□□□□ -0.2
CLN6-214ENST00000636314 OR52B4Q8NGK2 314 aa13.8□□□□□ -0.2
CLN6-214ENST00000636314 SRD5A3Q9H8P0 318 aa13.8□□□□□ -0.2
CLN6-214ENST00000636314 ENY2Q9NPA8 101 aa13.8□□□□□ -0.2
CLN6-214ENST00000636314 MCUBQ9NWR8 336 aa13.8□□□□□ -0.2
CLN6-214ENST00000636314 SCP2D1Q9UJQ7 156 aa13.8□□□□□ -0.2
CLN6-214ENST00000636314 TRAV25A0A0B4J276 109 aa13.79□□□□□ -0.2
CLN6-214ENST00000636314 A0A0G2JRQ6 117 aa13.79□□□□□ -0.2
CLN6-214ENST00000636314 CRYM-AS1A6NIL9 109 aa13.79□□□□□ -0.2
CLN6-214ENST00000636314 OR11H12B2RN74 326 aa13.79□□□□□ -0.2
CLN6-214ENST00000636314 CDS2O95674 445 aa13.79□□□□□ -0.2
CLN6-214ENST00000636314 DHODHQ02127 395 aa13.79□□□□□ -0.2
CLN6-214ENST00000636314 RELQ04864 619 aaPredicted RBP13.79□□□□□ -0.2
CLN6-214ENST00000636314 ANKRD55Q3KP44 614 aa13.79□□□□□ -0.2
CLN6-214ENST00000636314 FAM219AQ8IW50 185 aa13.79□□□□□ -0.2
CLN6-214ENST00000636314 RBPMSQ93062 196 aaKnown RBP13.79□□□□□ -0.2
CLN6-214ENST00000636314 TXN2Q99757 166 aa13.79□□□□□ -0.2
CLN6-214ENST00000636314 SOSTQ9BQB4 213 aa13.79□□□□□ -0.2
CLN6-214ENST00000636314 GPR132Q9UNW8 380 aa13.79□□□□□ -0.2
CLN6-214ENST00000636314 IGHV3OR16-8A0A075B7F1 116 aa13.78□□□□□ -0.2
CLN6-214ENST00000636314 INS-IGF2F8WCM5 200 aa13.78□□□□□ -0.2
CLN6-214ENST00000636314 GNG7O60262 68 aa13.78□□□□□ -0.2
CLN6-214ENST00000636314 IGHV3-48P01763 117 aa13.78□□□□□ -0.2
CLN6-214ENST00000636314 CTSGP08311 255 aa13.78□□□□□ -0.2
CLN6-214ENST00000636314 FCGR2BP31994 310 aaPredicted RBP13.78□□□□□ -0.2
CLN6-214ENST00000636314 ETV6P41212 452 aa13.78□□□□□ -0.2
CLN6-214ENST00000636314 LHFPL5Q8TAF8 219 aa13.78□□□□□ -0.2
CLN6-214ENST00000636314 GLYATL2Q8WU03 294 aa13.78□□□□□ -0.2
CLN6-214ENST00000636314 CORTO00230 105 aa13.77□□□□□ -0.21
CLN6-214ENST00000636314 ZNF207O43670 478 aaKnown RBP13.77□□□□□ -0.21
CLN6-214ENST00000636314 S100A5P33763 92 aa13.77□□□□□ -0.21
CLN6-214ENST00000636314 SUB1P53999 127 aaKnown RBP eCLIP13.77□□□□□ -0.21
CLN6-214ENST00000636314 TMEM268Q5VZI3 342 aa13.77□□□□□ -0.21
CLN6-214ENST00000636314 SCGB3A2Q96PL1 93 aa13.77□□□□□ -0.21
CLN6-214ENST00000636314 C15orf62A8K5M9 175 aa13.76□□□□□ -0.21
CLN6-214ENST00000636314 K7EMT4 169 aa13.76□□□□□ -0.21
CLN6-214ENST00000636314 JTBO76095 146 aa13.76□□□□□ -0.21
CLN6-214ENST00000636314 YIF1AO95070 293 aa13.76□□□□□ -0.21
CLN6-214ENST00000636314 FAUP35544 74 aaKnown RBP13.76□□□□□ -0.21
CLN6-214ENST00000636314 PYDC2Q56P42 97 aa13.76□□□□□ -0.21
CLN6-214ENST00000636314 LINC00322Q6ZN03 302 aaPredicted RBP13.76□□□□□ -0.21
CLN6-214ENST00000636314 SELENOHQ8IZQ5 122 aaKnown RBP13.76□□□□□ -0.21
CLN6-214ENST00000636314 SPAG8Q99932 426 aaPredicted RBP13.76□□□□□ -0.21
CLN6-214ENST00000636314 CACNG5Q9UF02 275 aa13.76□□□□□ -0.21
CLN6-214ENST00000636314 RNASE2P10153 161 aaKnown RBP13.75□□□□□ -0.21
CLN6-214ENST00000636314 NPBWR1P48145 328 aa13.75□□□□□ -0.21
CLN6-214ENST00000636314 AP3S2P59780 193 aa13.75□□□□□ -0.21
CLN6-214ENST00000636314 SPCS3P61009 180 aa13.75□□□□□ -0.21
CLN6-214ENST00000636314 LAMTOR1Q6IAA8 161 aa13.75□□□□□ -0.21
CLN6-214ENST00000636314 Q6ZRM9 215 aa13.75□□□□□ -0.21
CLN6-214ENST00000636314 DUSP18Q8NEJ0 188 aa13.75□□□□□ -0.21
CLN6-214ENST00000636314 TRIM63Q969Q1 353 aa13.75□□□□□ -0.21
CLN6-214ENST00000636314 RBM38Q9H0Z9 239 aaKnown RBP13.75□□□□□ -0.21
CLN6-214ENST00000636314 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.75□□□□□ -0.21
CLN6-214ENST00000636314 KCNIP3Q9Y2W7 256 aa13.75□□□□□ -0.21
CLN6-214ENST00000636314 V9GYH0 126 aa13.75□□□□□ -0.21
CLN6-214ENST00000636314 RBMY1BA6NDE4 496 aaKnown RBP13.74□□□□□ -0.21
CLN6-214ENST00000636314 RBMY1EA6NEQ0 496 aaKnown RBP13.74□□□□□ -0.21
CLN6-214ENST00000636314 TSPAN4O14817 238 aa13.74□□□□□ -0.21
CLN6-214ENST00000636314 RBMY1DP0C7P1 496 aaKnown RBP13.74□□□□□ -0.21
CLN6-214ENST00000636314 AARDQ4LEZ3 155 aa13.74□□□□□ -0.21
CLN6-214ENST00000636314 OR52E5Q8NH55 327 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms