RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 OR10R2Q8NGX6 335 aa12.84□□□□□ -0.35
CLN6-212ENST00000636020 C18orf15Q96N68 181 aa12.84□□□□□ -0.35
CLN6-212ENST00000636020 GINS3Q9BRX5 216 aa12.84□□□□□ -0.35
CLN6-212ENST00000636020 RAB22AQ9UL26 194 aa12.84□□□□□ -0.35
CLN6-212ENST00000636020 AK6Q9Y3D8 172 aaKnown RBP12.84□□□□□ -0.35
CLN6-212ENST00000636020 A0A075B6Q4 140 aa12.83□□□□□ -0.36
CLN6-212ENST00000636020 TMEM272A0A1B0GTI8 110 aa12.83□□□□□ -0.36
CLN6-212ENST00000636020 ZNF701M0R085 212 aaPredicted RBP12.83□□□□□ -0.36
CLN6-212ENST00000636020 CTXN2P0C2S0 81 aa12.83□□□□□ -0.36
CLN6-212ENST00000636020 HIST1H1DP16402 221 aaKnown RBP12.83□□□□□ -0.36
CLN6-212ENST00000636020 TALDO1P37837 337 aa12.83□□□□□ -0.36
CLN6-212ENST00000636020 TMBIM6P55061 237 aa12.83□□□□□ -0.36
CLN6-212ENST00000636020 TAS2R31P59538 309 aa12.83□□□□□ -0.36
CLN6-212ENST00000636020 RPS25P62851 125 aaKnown RBP12.83□□□□□ -0.36
CLN6-212ENST00000636020 SPAG16Q8N0X2 631 aa12.83□□□□□ -0.36
CLN6-212ENST00000636020 ZNRF2Q8NHG8 242 aa12.83□□□□□ -0.36
CLN6-212ENST00000636020 BCL7BQ9BQE9 202 aa12.83□□□□□ -0.36
CLN6-212ENST00000636020 TMEM189A5PLL7 270 aa12.82□□□□□ -0.36
CLN6-212ENST00000636020 RBFOX2O43251 390 aaKnown RBP eCLIP12.82□□□□□ -0.36
CLN6-212ENST00000636020 ZNF688P0C7X2 276 aa12.82□□□□□ -0.36
CLN6-212ENST00000636020 EMP1P54849 157 aa12.82□□□□□ -0.36
CLN6-212ENST00000636020 MFAP4P55083 255 aa12.82□□□□□ -0.36
CLN6-212ENST00000636020 CTF1Q16619 201 aa12.82□□□□□ -0.36
CLN6-212ENST00000636020 TMEM88Q6PEY1 159 aa12.82□□□□□ -0.36
CLN6-212ENST00000636020 TOMM20LQ6UXN7 152 aa12.82□□□□□ -0.36
CLN6-212ENST00000636020 OR1L8Q8NGR8 309 aa12.82□□□□□ -0.36
CLN6-212ENST00000636020 RAB2BQ8WUD1 216 aa12.82□□□□□ -0.36
CLN6-212ENST00000636020 NEU1Q99519 415 aa12.82□□□□□ -0.36
CLN6-212ENST00000636020 TXN2Q99757 166 aa12.82□□□□□ -0.36
CLN6-212ENST00000636020 DCSTAMPQ9H295 470 aa12.82□□□□□ -0.36
CLN6-212ENST00000636020 NDUFA4L2Q9NRX3 87 aa12.82□□□□□ -0.36
CLN6-212ENST00000636020 TMEM140Q9NV12 185 aa12.82□□□□□ -0.36
CLN6-212ENST00000636020 XCL2Q9UBD3 114 aa12.82□□□□□ -0.36
CLN6-212ENST00000636020 DKK2Q9UBU2 259 aa12.82□□□□□ -0.36
CLN6-212ENST00000636020 RSL24D1Q9UHA3 163 aaKnown RBP12.82□□□□□ -0.36
CLN6-212ENST00000636020 CCDC160A6NGH7 325 aa12.81□□□□□ -0.36
CLN6-212ENST00000636020 H3BMQ9 156 aa12.81□□□□□ -0.36
CLN6-212ENST00000636020 HTN3P15516 51 aa12.81□□□□□ -0.36
CLN6-212ENST00000636020 NQO2P16083 231 aa12.81□□□□□ -0.36
CLN6-212ENST00000636020 DTYMKP23919 212 aa12.81□□□□□ -0.36
CLN6-212ENST00000636020 Q5VSD8 79 aa12.81□□□□□ -0.36
CLN6-212ENST00000636020 LYPD1Q8N2G4 141 aa12.81□□□□□ -0.36
CLN6-212ENST00000636020 NIPSNAP3BQ9BS92 247 aa12.81□□□□□ -0.36
CLN6-212ENST00000636020 C1QTNF4Q9BXJ3 329 aa12.81□□□□□ -0.36
CLN6-212ENST00000636020 ELF5Q9UKW6 265 aaPredicted RBP12.81□□□□□ -0.36
CLN6-212ENST00000636020 I3L2K1 104 aa12.8□□□□□ -0.36
CLN6-212ENST00000636020 TNFSF12O43508 249 aa12.8□□□□□ -0.36
CLN6-212ENST00000636020 HPRT1P00492 218 aa12.8□□□□□ -0.36
CLN6-212ENST00000636020 FABP5Q01469 135 aa12.8□□□□□ -0.36
CLN6-212ENST00000636020 OXA1LQ15070 435 aa12.8□□□□□ -0.36
CLN6-212ENST00000636020 TRAM1Q15629 374 aa12.8□□□□□ -0.36
CLN6-212ENST00000636020 ZNF705AQ6ZN79 300 aaPredicted RBP12.8□□□□□ -0.36
CLN6-212ENST00000636020 STXBP6Q8NFX7 210 aa12.8□□□□□ -0.36
CLN6-212ENST00000636020 LSM10Q969L4 123 aaKnown RBP12.8□□□□□ -0.36
CLN6-212ENST00000636020 RAB40CQ96S21 281 aa12.8□□□□□ -0.36
CLN6-212ENST00000636020 ATG101Q9BSB4 218 aa12.8□□□□□ -0.36
CLN6-212ENST00000636020 TRDV1A0A1B0GX56 115 aa12.79□□□□□ -0.36
CLN6-212ENST00000636020 NOL3O60936 208 aaKnown RBP12.79□□□□□ -0.36
CLN6-212ENST00000636020 PSMA1P25786 263 aaKnown RBP12.79□□□□□ -0.36
CLN6-212ENST00000636020 TMEM91Q6ZNR0 172 aa12.79□□□□□ -0.36
CLN6-212ENST00000636020 C15orf53Q8NAA6 179 aa12.79□□□□□ -0.36
CLN6-212ENST00000636020 DMBX1Q8NFW5 382 aa12.79□□□□□ -0.36
CLN6-212ENST00000636020 TMEM203Q969S6 136 aa12.79□□□□□ -0.36
CLN6-212ENST00000636020 SLC25A46Q96AG3 418 aa12.79□□□□□ -0.36
CLN6-212ENST00000636020 HINT2Q9BX68 163 aa12.79□□□□□ -0.36
CLN6-212ENST00000636020 TEX48A0A1B0GUV7 120 aa12.78□□□□□ -0.36
CLN6-212ENST00000636020 SMIM9A6NGZ8 99 aa12.78□□□□□ -0.36
CLN6-212ENST00000636020 ZNF705FA8MVS1 300 aaPredicted RBP12.78□□□□□ -0.36
CLN6-212ENST00000636020 SULT1C2O00338 296 aa12.78□□□□□ -0.36
CLN6-212ENST00000636020 ZNF705DP0CH99 300 aaPredicted RBP12.78□□□□□ -0.36
CLN6-212ENST00000636020 ZNF705BP0CI00 300 aaPredicted RBP12.78□□□□□ -0.36
CLN6-212ENST00000636020 FGF9P31371 208 aaPredicted RBP12.78□□□□□ -0.36
CLN6-212ENST00000636020 XGP55808 180 aa12.78□□□□□ -0.36
CLN6-212ENST00000636020 NCS1P62166 190 aa12.78□□□□□ -0.36
CLN6-212ENST00000636020 LSM3P62310 102 aaKnown RBP12.78□□□□□ -0.36
CLN6-212ENST00000636020 FAM222AQ5U5X8 452 aa12.78□□□□□ -0.36
CLN6-212ENST00000636020 OR1P1Q8NH06 330 aa12.78□□□□□ -0.36
CLN6-212ENST00000636020 DCANP1Q8TF63 244 aa12.78□□□□□ -0.36
CLN6-212ENST00000636020 TMEM231Q9H6L2 316 aa12.78□□□□□ -0.36
CLN6-212ENST00000636020 CCL28Q9NRJ3 127 aa12.78□□□□□ -0.36
CLN6-212ENST00000636020 TXNL4BQ9NX01 149 aaKnown RBP12.78□□□□□ -0.36
CLN6-212ENST00000636020 SSR3Q9UNL2 185 aa12.78□□□□□ -0.36
CLN6-212ENST00000636020 LOC100506127A0A0U1RQW1 187 aa12.77□□□□□ -0.37
CLN6-212ENST00000636020 TGFBR1P36897 503 aa12.77□□□□□ -0.37
CLN6-212ENST00000636020 RANBP1P43487 201 aa12.77□□□□□ -0.37
CLN6-212ENST00000636020 VBP1P61758 197 aa12.77□□□□□ -0.37
CLN6-212ENST00000636020 NUTF2P61970 127 aaKnown RBP12.77□□□□□ -0.37
CLN6-212ENST00000636020 MSMO1Q15800 293 aa12.77□□□□□ -0.37
CLN6-212ENST00000636020 CNPY1Q3B7I2 92 aa12.77□□□□□ -0.37
CLN6-212ENST00000636020 CNIH2Q6PI25 160 aa12.77□□□□□ -0.37
CLN6-212ENST00000636020 FRZBQ92765 325 aa12.77□□□□□ -0.37
CLN6-212ENST00000636020 ZFAND3Q9H8U3 227 aa12.77□□□□□ -0.37
CLN6-212ENST00000636020 PLEKHA2Q9HB19 425 aa12.77□□□□□ -0.37
CLN6-212ENST00000636020 GNG7O60262 68 aa12.76□□□□□ -0.37
CLN6-212ENST00000636020 IGHV3-48P01763 117 aa12.76□□□□□ -0.37
CLN6-212ENST00000636020 BTF3P20290 206 aaKnown RBP12.76□□□□□ -0.37
CLN6-212ENST00000636020 SPCS2Q15005 226 aa12.76□□□□□ -0.37
CLN6-212ENST00000636020 HES5Q5TA89 166 aa12.76□□□□□ -0.37
CLN6-212ENST00000636020 C22orf42Q6IC83 251 aa12.76□□□□□ -0.37
CLN6-212ENST00000636020 MISP3Q96FF7 219 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms