RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 C15orf62A8K5M9 175 aa6.57□□□□□ -1.36
CDKL5-209ENST00000635828 SNRPGP15A8MWD9 76 aa6.57□□□□□ -1.36
CDKL5-209ENST00000635828 K7EPK0 472 aa6.57□□□□□ -1.36
CDKL5-209ENST00000635828 NKX2-1P43699 371 aaPredicted RBP6.57□□□□□ -1.36
CDKL5-209ENST00000635828 FOXE3Q13461 319 aa6.57□□□□□ -1.36
CDKL5-209ENST00000635828 HAPLN4Q86UW8 402 aa6.57□□□□□ -1.36
CDKL5-209ENST00000635828 CADM3Q8N126 398 aa6.57□□□□□ -1.36
CDKL5-209ENST00000635828 SYNGR2O43760 224 aa6.56□□□□□ -1.36
CDKL5-209ENST00000635828 MT-CO2P00403 227 aa6.56□□□□□ -1.36
CDKL5-209ENST00000635828 FGF2P09038 288 aa6.56□□□□□ -1.36
CDKL5-209ENST00000635828 BSXQ3C1V8 233 aa6.56□□□□□ -1.36
CDKL5-209ENST00000635828 RNF152Q8N8N0 203 aa6.56□□□□□ -1.36
CDKL5-209ENST00000635828 CHRDL1Q9BU40 450 aa6.56□□□□□ -1.36
CDKL5-209ENST00000635828 NUDT19A8MXV4 375 aa6.56□□□□□ -1.36
CDKL5-209ENST00000635828 I3L2K1 104 aa6.56□□□□□ -1.36
CDKL5-209ENST00000635828 IFNA21P01568 189 aa6.56□□□□□ -1.36
CDKL5-209ENST00000635828 PDLIM3Q53GG5 364 aaPredicted RBP6.56□□□□□ -1.36
CDKL5-209ENST00000635828 THOC7Q6I9Y2 204 aaKnown RBP6.56□□□□□ -1.36
CDKL5-209ENST00000635828 PPP1R1CQ8WVI7 109 aa6.56□□□□□ -1.36
CDKL5-209ENST00000635828 GPN1Q9HCN4 374 aaPredicted RBP6.56□□□□□ -1.36
CDKL5-209ENST00000635828 FKBP11Q9NYL4 201 aa6.56□□□□□ -1.36
CDKL5-209ENST00000635828 G3V3Q6 166 aa6.56□□□□□ -1.36
CDKL5-209ENST00000635828 IFNA10P01566 189 aa6.56□□□□□ -1.36
CDKL5-209ENST00000635828 CLEC3BP05452 202 aa6.56□□□□□ -1.36
CDKL5-209ENST00000635828 METTL15P1P0C7V9 234 aa6.56□□□□□ -1.36
CDKL5-209ENST00000635828 GPR183P32249 361 aa6.56□□□□□ -1.36
CDKL5-209ENST00000635828 SLC24A4Q8NFF2 622 aa6.56□□□□□ -1.36
CDKL5-209ENST00000635828 TSSC4Q9Y5U2 329 aaPredicted RBP6.56□□□□□ -1.36
CDKL5-209ENST00000635828 FAM24AA6NFZ4 105 aa6.55□□□□□ -1.36
CDKL5-209ENST00000635828 PRAF2O60831 178 aa6.55□□□□□ -1.36
CDKL5-209ENST00000635828 ATG12O94817 140 aa6.55□□□□□ -1.36
CDKL5-209ENST00000635828 ELANEP08246 267 aa6.55□□□□□ -1.36
CDKL5-209ENST00000635828 C2orf50Q96LR7 162 aa6.55□□□□□ -1.36
CDKL5-209ENST00000635828 RNF126Q9BV68 326 aa6.55□□□□□ -1.36
CDKL5-209ENST00000635828 C11orf1Q9H5F2 150 aa6.55□□□□□ -1.36
CDKL5-209ENST00000635828 TRAV14DV4A0A0A6YYC5 116 aa6.55□□□□□ -1.36
CDKL5-209ENST00000635828 A0A1B0GUS0 222 aa6.55□□□□□ -1.36
CDKL5-209ENST00000635828 DUXBA0A1W2PPF3 345 aa6.55□□□□□ -1.36
CDKL5-209ENST00000635828 BMPR1BO00238 502 aa6.55□□□□□ -1.36
CDKL5-209ENST00000635828 SNCAP37840 140 aa6.55□□□□□ -1.36
CDKL5-209ENST00000635828 RRAS2P62070 204 aaPredicted RBP6.55□□□□□ -1.36
CDKL5-209ENST00000635828 EXOSC2Q13868 293 aaKnown RBP6.55□□□□□ -1.36
CDKL5-209ENST00000635828 OR8G2PQ6IF36 304 aa6.55□□□□□ -1.36
CDKL5-209ENST00000635828 UNQ9165/PRO28630Q6UXU0 137 aa6.55□□□□□ -1.36
CDKL5-209ENST00000635828 OR52E5Q8NH55 327 aa6.55□□□□□ -1.36
CDKL5-209ENST00000635828 IGKV1OR2-108A0A075B7D4 117 aa6.55□□□□□ -1.36
CDKL5-209ENST00000635828 CST7O76096 145 aa6.55□□□□□ -1.36
CDKL5-209ENST00000635828 OR2C1O95371 312 aa6.55□□□□□ -1.36
CDKL5-209ENST00000635828 ADMP35318 185 aa6.55□□□□□ -1.36
CDKL5-209ENST00000635828 OPRK1P41145 380 aa6.55□□□□□ -1.36
CDKL5-209ENST00000635828 CDX1P47902 265 aaPredicted RBP6.55□□□□□ -1.36
CDKL5-209ENST00000635828 OR1P1Q8NH06 330 aa6.55□□□□□ -1.36
CDKL5-209ENST00000635828 DLX4Q92988 240 aaPredicted RBP6.55□□□□□ -1.36
CDKL5-209ENST00000635828 UBE2E2Q96LR5 201 aa6.55□□□□□ -1.36
CDKL5-209ENST00000635828 MED28Q9H204 178 aa6.55□□□□□ -1.36
CDKL5-209ENST00000635828 COL7A1Q02388 2944 aa6.55□□□□□ -1.36
CDKL5-209ENST00000635828 PMS2P5A8MQ11 134 aa6.54□□□□□ -1.36
CDKL5-209ENST00000635828 ERHP84090 104 aaKnown RBP6.54□□□□□ -1.36
CDKL5-209ENST00000635828 KRTAP21-3Q3LHN1 58 aa6.54□□□□□ -1.36
CDKL5-209ENST00000635828 C1QL4Q86Z23 238 aa6.54□□□□□ -1.36
CDKL5-209ENST00000635828 TMEM217Q8N7C4 229 aa6.54□□□□□ -1.36
CDKL5-209ENST00000635828 RFNGQ9Y644 331 aa6.54□□□□□ -1.36
CDKL5-209ENST00000635828 NPY1RP25929 384 aa6.54□□□□□ -1.36
CDKL5-209ENST00000635828 NHLH2Q02577 135 aa6.54□□□□□ -1.36
CDKL5-209ENST00000635828 Q6ZNX1 250 aa6.54□□□□□ -1.36
CDKL5-209ENST00000635828 TMEM182Q6ZP80 229 aaPredicted RBP6.54□□□□□ -1.36
CDKL5-209ENST00000635828 GON7Q9BXV9 100 aa6.54□□□□□ -1.36
CDKL5-209ENST00000635828 PSENENQ9NZ42 101 aa6.54□□□□□ -1.36
CDKL5-209ENST00000635828 ZNF580Q9UK33 172 aa6.54□□□□□ -1.36
CDKL5-209ENST00000635828 IGSF23A1L1A6 192 aa6.54□□□□□ -1.36
CDKL5-209ENST00000635828 PRSS46E5RG02 174 aa6.54□□□□□ -1.36
CDKL5-209ENST00000635828 CCL24O00175 119 aa6.54□□□□□ -1.36
CDKL5-209ENST00000635828 ZNF207O43670 478 aaKnown RBP6.54□□□□□ -1.36
CDKL5-209ENST00000635828 SLC25A6P12236 298 aa6.54□□□□□ -1.36
CDKL5-209ENST00000635828 ATP5G2Q06055 141 aa6.54□□□□□ -1.36
CDKL5-209ENST00000635828 SHISA2Q6UWI4 295 aa6.54□□□□□ -1.36
CDKL5-209ENST00000635828 MRPL41Q8IXM3 137 aaKnown RBP6.54□□□□□ -1.36
CDKL5-209ENST00000635828 NECAP1Q8NC96 275 aa6.54□□□□□ -1.36
CDKL5-209ENST00000635828 ZNF502Q8TBZ5 544 aa6.54□□□□□ -1.36
CDKL5-209ENST00000635828 CACNG8Q8WXS5 425 aa6.54□□□□□ -1.36
CDKL5-209ENST00000635828 RANGRFQ9HD47 186 aaPredicted RBP6.54□□□□□ -1.36
CDKL5-209ENST00000635828 ENY2Q9NPA8 101 aa6.54□□□□□ -1.36
CDKL5-209ENST00000635828 SORL1Q92673 2214 aa6.54□□□□□ -1.36
CDKL5-209ENST00000635828 GATA2P23769 480 aaPredicted RBP6.53□□□□□ -1.36
CDKL5-209ENST00000635828 OXLD1Q5BKU9 147 aa6.53□□□□□ -1.36
CDKL5-209ENST00000635828 ZNF343Q6P1L6 599 aa6.53□□□□□ -1.36
CDKL5-209ENST00000635828 PRSS54Q6PEW0 395 aa6.53□□□□□ -1.36
CDKL5-209ENST00000635828 NDUFA11Q86Y39 141 aa6.53□□□□□ -1.36
CDKL5-209ENST00000635828 C4orf3Q8WVX3 66 aa6.53□□□□□ -1.36
CDKL5-209ENST00000635828 RCC1LQ96I51 464 aaKnown RBP6.53□□□□□ -1.36
CDKL5-209ENST00000635828 HIPK2Q9H2X6 1198 aa6.53□□□□□ -1.36
CDKL5-209ENST00000635828 IGHV3OR16-13A0A075B7E8 117 aa6.53□□□□□ -1.36
CDKL5-209ENST00000635828 IGHV3-49A0A0A0MS15 119 aa6.53□□□□□ -1.36
CDKL5-209ENST00000635828 IGHV3-74A0A0B4J1X5 117 aa6.53□□□□□ -1.36
CDKL5-209ENST00000635828 IFNA4P05014 189 aa6.53□□□□□ -1.36
CDKL5-209ENST00000635828 HOXD3P31249 432 aaPredicted RBP6.53□□□□□ -1.36
CDKL5-209ENST00000635828 CAV2P51636 162 aa6.53□□□□□ -1.36
CDKL5-209ENST00000635828 SYNJ2BPP57105 145 aa6.53□□□□□ -1.36
CDKL5-209ENST00000635828 ZNF114Q8NC26 417 aa6.53□□□□□ -1.36
CDKL5-209ENST00000635828 ACY3Q96HD9 319 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms