RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 CLDN34H7C241 214 aa11.48□□□□□ -0.57
LINC00339-208ENST00000634934 NDUFA3O95167 84 aa11.48□□□□□ -0.57
LINC00339-208ENST00000634934 PRH1P02810 166 aa11.48□□□□□ -0.57
LINC00339-208ENST00000634934 ATP6V0CP27449 155 aa11.48□□□□□ -0.57
LINC00339-208ENST00000634934 MEOX2P50222 304 aa11.48□□□□□ -0.57
LINC00339-208ENST00000634934 RAB2AP61019 212 aa11.48□□□□□ -0.57
LINC00339-208ENST00000634934 VAMP2P63027 116 aa11.48□□□□□ -0.57
LINC00339-208ENST00000634934 POU2AF1Q16633 256 aa11.48□□□□□ -0.57
LINC00339-208ENST00000634934 C5orf64Q2M2E5 130 aa11.48□□□□□ -0.57
LINC00339-208ENST00000634934 ZNF506Q5JVG8 444 aa11.48□□□□□ -0.57
LINC00339-208ENST00000634934 SPSB3Q6PJ21 355 aa11.48□□□□□ -0.57
LINC00339-208ENST00000634934 Q8N9W7 124 aa11.48□□□□□ -0.57
LINC00339-208ENST00000634934 TEX45Q8NA69 505 aa11.48□□□□□ -0.57
LINC00339-208ENST00000634934 VSTM2AQ8TAG5 236 aa11.48□□□□□ -0.57
LINC00339-208ENST00000634934 ATP5SQ99766 215 aa11.48□□□□□ -0.57
LINC00339-208ENST00000634934 PSMG3Q9BT73 122 aaPredicted RBP11.48□□□□□ -0.57
LINC00339-208ENST00000634934 SIGLEC9Q9Y336 463 aa11.48□□□□□ -0.57
LINC00339-208ENST00000634934 M0QZK8 103 aa11.47□□□□□ -0.57
LINC00339-208ENST00000634934 KBTBD11O94819 623 aa11.47□□□□□ -0.57
LINC00339-208ENST00000634934 IZUMO4Q1ZYL8 232 aa11.47□□□□□ -0.57
LINC00339-208ENST00000634934 C5orf56Q8N8D9 126 aa11.47□□□□□ -0.57
LINC00339-208ENST00000634934 OR2G3Q8NGZ4 309 aa11.47□□□□□ -0.57
LINC00339-208ENST00000634934 EIF5A2Q9GZV4 153 aaKnown RBP11.47□□□□□ -0.57
LINC00339-208ENST00000634934 TRAV3A0A0B4J244 114 aa11.46□□□□□ -0.57
LINC00339-208ENST00000634934 RBFOX3A6NFN3 312 aa11.46□□□□□ -0.57
LINC00339-208ENST00000634934 B4DEV8 164 aa11.46□□□□□ -0.57
LINC00339-208ENST00000634934 AGPAT2O15120 278 aa11.46□□□□□ -0.57
LINC00339-208ENST00000634934 RBMXL2O75526 392 aaKnown RBP11.46□□□□□ -0.57
LINC00339-208ENST00000634934 CRYGBP07316 175 aa11.46□□□□□ -0.57
LINC00339-208ENST00000634934 RNASE1P07998 156 aaKnown RBP11.46□□□□□ -0.57
LINC00339-208ENST00000634934 SULT1A1P50225 295 aa11.46□□□□□ -0.57
LINC00339-208ENST00000634934 POLR2GP62487 172 aaKnown RBP eCLIP11.46□□□□□ -0.57
LINC00339-208ENST00000634934 GNB1P62873 340 aa11.46□□□□□ -0.57
LINC00339-208ENST00000634934 KHDC3LQ587J8 217 aa11.46□□□□□ -0.57
LINC00339-208ENST00000634934 C9orf152Q5JTZ5 239 aa11.46□□□□□ -0.57
LINC00339-208ENST00000634934 PPP1R27Q86WC6 154 aa11.46□□□□□ -0.57
LINC00339-208ENST00000634934 SH3BGRL3Q9H299 93 aa11.46□□□□□ -0.57
LINC00339-208ENST00000634934 RPS10P5Q9NQ39 176 aa11.46□□□□□ -0.57
LINC00339-208ENST00000634934 BET1LQ9NYM9 111 aa11.46□□□□□ -0.57
LINC00339-208ENST00000634934 A0A0G2JRQ6 117 aa11.45□□□□□ -0.58
LINC00339-208ENST00000634934 FAM181BA6NEQ2 426 aa11.45□□□□□ -0.58
LINC00339-208ENST00000634934 FAM24AA6NFZ4 105 aa11.45□□□□□ -0.58
LINC00339-208ENST00000634934 UPK2O00526 184 aa11.45□□□□□ -0.58
LINC00339-208ENST00000634934 FCN1O00602 326 aa11.45□□□□□ -0.58
LINC00339-208ENST00000634934 AMY1AP04745 511 aa11.45□□□□□ -0.58
LINC00339-208ENST00000634934 OR9G9P0C7N8 305 aa11.45□□□□□ -0.58
LINC00339-208ENST00000634934 RAB5AP20339 215 aa11.45□□□□□ -0.58
LINC00339-208ENST00000634934 PAX9P55771 341 aa11.45□□□□□ -0.58
LINC00339-208ENST00000634934 RPL23AP62750 156 aaKnown RBP11.45□□□□□ -0.58
LINC00339-208ENST00000634934 BLCAPP62952 87 aa11.45□□□□□ -0.58
LINC00339-208ENST00000634934 PRSS8Q16651 343 aa11.45□□□□□ -0.58
LINC00339-208ENST00000634934 SOHLH1Q5JUK2 328 aa11.45□□□□□ -0.58
LINC00339-208ENST00000634934 SLC35E3Q7Z769 313 aa11.45□□□□□ -0.58
LINC00339-208ENST00000634934 STX12Q86Y82 276 aa11.45□□□□□ -0.58
LINC00339-208ENST00000634934 HSD17B11Q8NBQ5 300 aa11.45□□□□□ -0.58
LINC00339-208ENST00000634934 OR4A16Q8NH70 328 aa11.45□□□□□ -0.58
LINC00339-208ENST00000634934 OR4A5Q8NH83 315 aa11.45□□□□□ -0.58
LINC00339-208ENST00000634934 TMEM167AQ8TBQ9 72 aa11.45□□□□□ -0.58
LINC00339-208ENST00000634934 GPR146Q96CH1 333 aa11.45□□□□□ -0.58
LINC00339-208ENST00000634934 C12orf57Q99622 126 aa11.45□□□□□ -0.58
LINC00339-208ENST00000634934 NPFFR1Q9GZQ6 430 aa11.45□□□□□ -0.58
LINC00339-208ENST00000634934 ZNF430Q9H8G1 570 aaPredicted RBP11.45□□□□□ -0.58
LINC00339-208ENST00000634934 ACTL6BO94805 426 aa11.45□□□□□ -0.58
LINC00339-208ENST00000634934 SCAF4O95104 1147 aaKnown RBP11.45□□□□□ -0.58
LINC00339-208ENST00000634934 CA2P00918 260 aa11.45□□□□□ -0.58
LINC00339-208ENST00000634934 P0C879 139 aa11.45□□□□□ -0.58
LINC00339-208ENST00000634934 OR2B8PP59922 312 aa11.45□□□□□ -0.58
LINC00339-208ENST00000634934 RPL8P62917 257 aaKnown RBP11.45□□□□□ -0.58
LINC00339-208ENST00000634934 TMEM182Q6ZP80 229 aaPredicted RBP11.45□□□□□ -0.58
LINC00339-208ENST00000634934 MMD2Q8IY49 270 aa11.45□□□□□ -0.58
LINC00339-208ENST00000634934 OR5C1Q8NGR4 320 aa11.45□□□□□ -0.58
LINC00339-208ENST00000634934 FAM213BQ8TBF2 198 aa11.45□□□□□ -0.58
LINC00339-208ENST00000634934 TMEM242Q9NWH2 141 aa11.45□□□□□ -0.58
LINC00339-208ENST00000634934 CACNG5Q9UF02 275 aa11.45□□□□□ -0.58
LINC00339-208ENST00000634934 TGOLN2O43493 480 aa11.44□□□□□ -0.58
LINC00339-208ENST00000634934 SSSCA1O60232 199 aa11.44□□□□□ -0.58
LINC00339-208ENST00000634934 CNIH1O95406 144 aa11.44□□□□□ -0.58
LINC00339-208ENST00000634934 TMEM50AO95807 157 aa11.44□□□□□ -0.58
LINC00339-208ENST00000634934 SRP19P09132 144 aaKnown RBP11.44□□□□□ -0.58
LINC00339-208ENST00000634934 B2MP61769 119 aa11.44□□□□□ -0.58
LINC00339-208ENST00000634934 SERF2P84101 59 aa11.44□□□□□ -0.58
LINC00339-208ENST00000634934 RELBQ01201 579 aa11.44□□□□□ -0.58
LINC00339-208ENST00000634934 TNXAQ16473 311 aa11.44□□□□□ -0.58
LINC00339-208ENST00000634934 CXorf66Q5JRM2 361 aaPredicted RBP11.44□□□□□ -0.58
LINC00339-208ENST00000634934 Q6ZRM9 215 aa11.44□□□□□ -0.58
LINC00339-208ENST00000634934 MBD3L1Q8WWY6 194 aa11.44□□□□□ -0.58
LINC00339-208ENST00000634934 WRBO00258 174 aa11.43□□□□□ -0.58
LINC00339-208ENST00000634934 HLA-DRB1P01911 266 aa11.43□□□□□ -0.58
LINC00339-208ENST00000634934 OPN1MWP04001 364 aa11.43□□□□□ -0.58
LINC00339-208ENST00000634934 IL6RP08887 468 aaPredicted RBP11.43□□□□□ -0.58
LINC00339-208ENST00000634934 OPN1MW2P0DN77 364 aa11.43□□□□□ -0.58
LINC00339-208ENST00000634934 OPN1MW3P0DN78 364 aa11.43□□□□□ -0.58
LINC00339-208ENST00000634934 MYOD1P15172 320 aa11.43□□□□□ -0.58
LINC00339-208ENST00000634934 FHITP49789 147 aa11.43□□□□□ -0.58
LINC00339-208ENST00000634934 CX3CL1P78423 397 aa11.43□□□□□ -0.58
LINC00339-208ENST00000634934 PNRC1Q12796 327 aaPredicted RBP11.43□□□□□ -0.58
LINC00339-208ENST00000634934 MRGPRG-AS1Q2M3A8 158 aa11.43□□□□□ -0.58
LINC00339-208ENST00000634934 ARSJQ5FYB0 599 aaPredicted RBP11.43□□□□□ -0.58
LINC00339-208ENST00000634934 AKR1C8PQ5T2L2 129 aa11.43□□□□□ -0.58
LINC00339-208ENST00000634934 CENPVQ7Z7K6 275 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms