RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 CD300EQ496F6 205 aaPredicted RBP11.9□□□□□ -0.5
LINC00339-207ENST00000634712 TRIQKQ629K1 86 aa11.9□□□□□ -0.5
LINC00339-207ENST00000634712 IL22RA2Q969J5 263 aa11.9□□□□□ -0.5
LINC00339-207ENST00000634712 TMEM230Q96A57 120 aa11.9□□□□□ -0.5
LINC00339-207ENST00000634712 GPR146Q96CH1 333 aa11.9□□□□□ -0.5
LINC00339-207ENST00000634712 SLC25A21Q9BQT8 299 aaPredicted RBP11.9□□□□□ -0.5
LINC00339-207ENST00000634712 PIGBOS1A0A0B4J2F0 54 aa11.89□□□□□ -0.51
LINC00339-207ENST00000634712 IZUMO1RA6ND01 250 aa11.89□□□□□ -0.51
LINC00339-207ENST00000634712 A8MWP6 167 aa11.89□□□□□ -0.51
LINC00339-207ENST00000634712 INS-IGF2F8WCM5 200 aa11.89□□□□□ -0.51
LINC00339-207ENST00000634712 NUPL2O15504 423 aaKnown RBP11.89□□□□□ -0.51
LINC00339-207ENST00000634712 MT-CO2P00403 227 aa11.89□□□□□ -0.51
LINC00339-207ENST00000634712 SRPXP78539 464 aa11.89□□□□□ -0.51
LINC00339-207ENST00000634712 GUCA2BQ16661 112 aa11.89□□□□□ -0.51
LINC00339-207ENST00000634712 TM4SF20Q53R12 229 aa11.89□□□□□ -0.51
LINC00339-207ENST00000634712 ADAMTSL5Q6ZMM2 481 aa11.89□□□□□ -0.51
LINC00339-207ENST00000634712 Q6ZRM9 215 aa11.89□□□□□ -0.51
LINC00339-207ENST00000634712 LGI3Q8N145 548 aa11.89□□□□□ -0.51
LINC00339-207ENST00000634712 UXS1Q8NBZ7 420 aa11.89□□□□□ -0.51
LINC00339-207ENST00000634712 MARC2Q969Z3 335 aa11.89□□□□□ -0.51
LINC00339-207ENST00000634712 TXN2Q99757 166 aa11.89□□□□□ -0.51
LINC00339-207ENST00000634712 ZNF436Q9C0F3 470 aaPredicted RBP11.89□□□□□ -0.51
LINC00339-207ENST00000634712 SRRQ9GZT4 340 aa11.89□□□□□ -0.51
LINC00339-207ENST00000634712 CACNG5Q9UF02 275 aa11.89□□□□□ -0.51
LINC00339-207ENST00000634712 CACFD1Q9UGQ2 172 aa11.89□□□□□ -0.51
LINC00339-207ENST00000634712 TMEM213A2RRL7 107 aa11.88□□□□□ -0.51
LINC00339-207ENST00000634712 I3L2K1 104 aa11.88□□□□□ -0.51
LINC00339-207ENST00000634712 CORTO00230 105 aa11.88□□□□□ -0.51
LINC00339-207ENST00000634712 NDUFA4O00483 81 aa11.88□□□□□ -0.51
LINC00339-207ENST00000634712 ELLP55199 621 aaPredicted RBP11.88□□□□□ -0.51
LINC00339-207ENST00000634712 RELQ04864 619 aaPredicted RBP11.88□□□□□ -0.51
LINC00339-207ENST00000634712 C11orf87Q6NUJ2 197 aa11.88□□□□□ -0.51
LINC00339-207ENST00000634712 UNQ9165/PRO28630Q6UXU0 137 aa11.88□□□□□ -0.51
LINC00339-207ENST00000634712 Q8N1Y9 231 aa11.88□□□□□ -0.51
LINC00339-207ENST00000634712 DUSP18Q8NEJ0 188 aa11.88□□□□□ -0.51
LINC00339-207ENST00000634712 OR52E5Q8NH55 327 aa11.88□□□□□ -0.51
LINC00339-207ENST00000634712 CACNG8Q8WXS5 425 aa11.88□□□□□ -0.51
LINC00339-207ENST00000634712 CHRDL1Q9BU40 450 aa11.88□□□□□ -0.51
LINC00339-207ENST00000634712 C20orf24Q9BUV8 137 aa11.88□□□□□ -0.51
LINC00339-207ENST00000634712 TUBA4BQ9H853 241 aa11.88□□□□□ -0.51
LINC00339-207ENST00000634712 HEYLQ9NQ87 328 aaPredicted RBP11.88□□□□□ -0.51
LINC00339-207ENST00000634712 PRR13Q9NZ81 148 aa11.88□□□□□ -0.51
LINC00339-207ENST00000634712 MRPL27Q9P0M9 148 aaKnown RBP11.88□□□□□ -0.51
LINC00339-207ENST00000634712 CEBPZOSA8MTT3 80 aa11.87□□□□□ -0.51
LINC00339-207ENST00000634712 GNG7O60262 68 aa11.87□□□□□ -0.51
LINC00339-207ENST00000634712 IGHV3-48P01763 117 aa11.87□□□□□ -0.51
LINC00339-207ENST00000634712 FRMD6-AS1P0C7T7 363 aa11.87□□□□□ -0.51
LINC00339-207ENST00000634712 SULT1A3P0DMM9 295 aa11.87□□□□□ -0.51
LINC00339-207ENST00000634712 SULT1A4P0DMN0 295 aa11.87□□□□□ -0.51
LINC00339-207ENST00000634712 IGHV4-30-4P0DP06 118 aa11.87□□□□□ -0.51
LINC00339-207ENST00000634712 EDN2P20800 178 aa11.87□□□□□ -0.51
LINC00339-207ENST00000634712 TMEM128Q5BJH2 165 aa11.87□□□□□ -0.51
LINC00339-207ENST00000634712 DNAH9Q9NYC9 4486 aa11.87□□□□□ -0.51
LINC00339-207ENST00000634712 A0A0B4J2A0 478 aa11.86□□□□□ -0.51
LINC00339-207ENST00000634712 NAP1L6A6NFF2 107 aa11.86□□□□□ -0.51
LINC00339-207ENST00000634712 CENPXA8MT69 81 aa11.86□□□□□ -0.51
LINC00339-207ENST00000634712 YIF1AO95070 293 aa11.86□□□□□ -0.51
LINC00339-207ENST00000634712 CTSGP08311 255 aa11.86□□□□□ -0.51
LINC00339-207ENST00000634712 VAMP1P23763 118 aa11.86□□□□□ -0.51
LINC00339-207ENST00000634712 HTR2BP41595 481 aa11.86□□□□□ -0.51
LINC00339-207ENST00000634712 NPBWR1P48145 328 aa11.86□□□□□ -0.51
LINC00339-207ENST00000634712 SUPT4H1P63272 117 aaKnown RBP11.86□□□□□ -0.51
LINC00339-207ENST00000634712 RBPMS2Q6ZRY4 209 aaKnown RBP11.86□□□□□ -0.51
LINC00339-207ENST00000634712 TMEM190Q8WZ59 177 aa11.86□□□□□ -0.51
LINC00339-207ENST00000634712 HIPK2Q9H2X6 1198 aa11.86□□□□□ -0.51
LINC00339-207ENST00000634712 SHPKQ9UHJ6 478 aa11.86□□□□□ -0.51
LINC00339-207ENST00000634712 SELENOKQ9Y6D0 94 aa11.86□□□□□ -0.51
LINC00339-207ENST00000634712 LINC00854A0A1B0GVQ3 168 aa11.85□□□□□ -0.51
LINC00339-207ENST00000634712 ZNF785A8K8V0 405 aa11.85□□□□□ -0.51
LINC00339-207ENST00000634712 F8W735 103 aaPredicted RBP11.85□□□□□ -0.51
LINC00339-207ENST00000634712 RNASE2P10153 161 aaKnown RBP11.85□□□□□ -0.51
LINC00339-207ENST00000634712 FCGR2BP31994 310 aaPredicted RBP11.85□□□□□ -0.51
LINC00339-207ENST00000634712 ADMP35318 185 aa11.85□□□□□ -0.51
LINC00339-207ENST00000634712 CCR6P51684 374 aa11.85□□□□□ -0.51
LINC00339-207ENST00000634712 CD81P60033 236 aa11.85□□□□□ -0.51
LINC00339-207ENST00000634712 RBMS2Q15434 407 aaKnown RBP11.85□□□□□ -0.51
LINC00339-207ENST00000634712 BAK1Q16611 211 aa11.85□□□□□ -0.51
LINC00339-207ENST00000634712 AARDQ4LEZ3 155 aa11.85□□□□□ -0.51
LINC00339-207ENST00000634712 BTNL8Q6UX41 500 aa11.85□□□□□ -0.51
LINC00339-207ENST00000634712 LYZL2Q7Z4W2 148 aa11.85□□□□□ -0.51
LINC00339-207ENST00000634712 WDR89Q96FK6 387 aaPredicted RBP11.85□□□□□ -0.51
LINC00339-207ENST00000634712 DAZ1Q9NQZ3 744 aaKnown RBP11.85□□□□□ -0.51
LINC00339-207ENST00000634712 MLXQ9UH92 298 aa11.85□□□□□ -0.51
LINC00339-207ENST00000634712 U3KQK5 164 aa11.85□□□□□ -0.51
LINC00339-207ENST00000634712 COL7A1Q02388 2944 aa11.84□□□□□ -0.51
LINC00339-207ENST00000634712 SCGB2A1O75556 95 aa11.84□□□□□ -0.51
LINC00339-207ENST00000634712 NXPH3O95157 252 aa11.84□□□□□ -0.51
LINC00339-207ENST00000634712 C8orf88P0DMB2 117 aa11.84□□□□□ -0.51
LINC00339-207ENST00000634712 OPRK1P41145 380 aa11.84□□□□□ -0.51
LINC00339-207ENST00000634712 SMCO1Q147U7 214 aa11.84□□□□□ -0.51
LINC00339-207ENST00000634712 SBSPONQ8IVN8 264 aa11.84□□□□□ -0.51
LINC00339-207ENST00000634712 CENPSQ8N2Z9 138 aa11.84□□□□□ -0.51
LINC00339-207ENST00000634712 NEURL2Q9BR09 285 aa11.84□□□□□ -0.51
LINC00339-207ENST00000634712 ZMAT4Q9H898 229 aa11.84□□□□□ -0.51
LINC00339-207ENST00000634712 IGHV3OR16-8A0A075B7F1 116 aa11.83□□□□□ -0.52
LINC00339-207ENST00000634712 RPS10-NUDT3A0A1W2PQS6 291 aa11.83□□□□□ -0.52
LINC00339-207ENST00000634712 C15orf62A8K5M9 175 aa11.83□□□□□ -0.52
LINC00339-207ENST00000634712 A8MZ25 164 aa11.83□□□□□ -0.52
LINC00339-207ENST00000634712 K7EMT4 169 aa11.83□□□□□ -0.52
LINC00339-207ENST00000634712 ZNF207O43670 478 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms