RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 SCO2A0A1W2PP80 73 aa9.88□□□□□ -0.83
SHPRH-211ENST00000629427 C1QTNF9BB2RNN3 333 aa9.88□□□□□ -0.83
SHPRH-211ENST00000629427 C21orf62-AS1Q17RA5 79 aa9.88□□□□□ -0.83
SHPRH-211ENST00000629427 ZCCHC24Q8N2G6 241 aaKnown RBP9.88□□□□□ -0.83
SHPRH-211ENST00000629427 CACNA1EQ15878 2313 aa9.88□□□□□ -0.83
SHPRH-211ENST00000629427 RBMY1BA6NDE4 496 aaKnown RBP9.88□□□□□ -0.83
SHPRH-211ENST00000629427 RBMY1EA6NEQ0 496 aaKnown RBP9.88□□□□□ -0.83
SHPRH-211ENST00000629427 OR11H12B2RN74 326 aa9.88□□□□□ -0.83
SHPRH-211ENST00000629427 RBMY1DP0C7P1 496 aaKnown RBP9.88□□□□□ -0.83
SHPRH-211ENST00000629427 RBMY1A1P0DJD3 496 aaKnown RBP9.88□□□□□ -0.83
SHPRH-211ENST00000629427 RBMY1CP0DJD4 496 aa9.88□□□□□ -0.83
SHPRH-211ENST00000629427 CCL3L1P16619 93 aa9.88□□□□□ -0.83
SHPRH-211ENST00000629427 OR11H1Q8NG94 326 aa9.88□□□□□ -0.83
SHPRH-211ENST00000629427 OR11H4Q8NGC9 324 aa9.88□□□□□ -0.83
SHPRH-211ENST00000629427 OR11H2Q8NH07 326 aa9.88□□□□□ -0.83
SHPRH-211ENST00000629427 Q9H3A6 140 aa9.88□□□□□ -0.83
SHPRH-211ENST00000629427 A0A0G2JK05 382 aa9.88□□□□□ -0.83
SHPRH-211ENST00000629427 ZNF708P17019 499 aa9.88□□□□□ -0.83
SHPRH-211ENST00000629427 LEMD1Q68G75 181 aa9.88□□□□□ -0.83
SHPRH-211ENST00000629427 RNASEH2CQ8TDP1 164 aaKnown RBP9.88□□□□□ -0.83
SHPRH-211ENST00000629427 IQCF6A8MYZ5 107 aa9.88□□□□□ -0.83
SHPRH-211ENST00000629427 APOHP02749 345 aaPredicted RBP9.88□□□□□ -0.83
SHPRH-211ENST00000629427 LTBRP36941 435 aa9.88□□□□□ -0.83
SHPRH-211ENST00000629427 UBE2DNLQ8IWF7 75 aa9.88□□□□□ -0.83
SHPRH-211ENST00000629427 NPDC1Q9NQX5 325 aaPredicted RBP9.88□□□□□ -0.83
SHPRH-211ENST00000629427 TBL2Q9Y4P3 447 aaKnown RBP9.88□□□□□ -0.83
SHPRH-211ENST00000629427 LDLRAD4O15165 306 aa9.88□□□□□ -0.83
SHPRH-211ENST00000629427 SLC25A20O43772 301 aa9.88□□□□□ -0.83
SHPRH-211ENST00000629427 SAMD13Q5VXD3 122 aa9.88□□□□□ -0.83
SHPRH-211ENST00000629427 OR5AN1Q8NGI8 311 aa9.88□□□□□ -0.83
SHPRH-211ENST00000629427 GREB1LQ9C091 1923 aaPredicted RBP9.88□□□□□ -0.83
SHPRH-211ENST00000629427 A0A1B0GUT8 65 aa9.88□□□□□ -0.83
SHPRH-211ENST00000629427 NBR2O15453 112 aa9.87□□□□□ -0.83
SHPRH-211ENST00000629427 CA7P43166 264 aa9.87□□□□□ -0.83
SHPRH-211ENST00000629427 MEF2CQ06413 473 aaPredicted RBP9.87□□□□□ -0.83
SHPRH-211ENST00000629427 OR10J3Q5JRS4 329 aa9.87□□□□□ -0.83
SHPRH-211ENST00000629427 C1QTNF5Q9BXJ0 243 aa9.87□□□□□ -0.83
SHPRH-211ENST00000629427 CACNA1GO43497 2377 aa9.87□□□□□ -0.83
SHPRH-211ENST00000629427 TRGV4A0A0C4DH28 118 aa9.87□□□□□ -0.83
SHPRH-211ENST00000629427 LYNX1G3V0Z9 82 aa9.87□□□□□ -0.83
SHPRH-211ENST00000629427 LYNX1P0DP58 116 aa9.87□□□□□ -0.83
SHPRH-211ENST00000629427 IGLV3-21P80748 117 aaPredicted RBP9.87□□□□□ -0.83
SHPRH-211ENST00000629427 FER1L6-AS1Q8NA97 138 aa9.87□□□□□ -0.83
SHPRH-211ENST00000629427 ATP5LO75964 103 aa9.87□□□□□ -0.83
SHPRH-211ENST00000629427 HOXA5P20719 270 aa9.87□□□□□ -0.83
SHPRH-211ENST00000629427 C3orf36Q3SXR2 165 aa9.87□□□□□ -0.83
SHPRH-211ENST00000629427 IGKV1D-43A0A0B4J1Z2 117 aa9.87□□□□□ -0.83
SHPRH-211ENST00000629427 SLC17A3O00476 420 aa9.87□□□□□ -0.83
SHPRH-211ENST00000629427 THBDP07204 575 aa9.87□□□□□ -0.83
SHPRH-211ENST00000629427 NMBP08949 121 aa9.87□□□□□ -0.83
SHPRH-211ENST00000629427 LRTM2Q8N967 370 aa9.87□□□□□ -0.83
SHPRH-211ENST00000629427 WFDC12Q8WWY7 111 aa9.87□□□□□ -0.83
SHPRH-211ENST00000629427 CRPP02741 224 aa9.87□□□□□ -0.83
SHPRH-211ENST00000629427 LHX2P50458 406 aa9.87□□□□□ -0.83
SHPRH-211ENST00000629427 SPACA3Q8IXA5 215 aa9.87□□□□□ -0.83
SHPRH-211ENST00000629427 PUSL1Q8N0Z8 303 aaKnown RBP9.87□□□□□ -0.83
SHPRH-211ENST00000629427 CACNA1BQ00975 2339 aa9.87□□□□□ -0.83
SHPRH-211ENST00000629427 TRAV14DV4A0A0A6YYC5 116 aa9.87□□□□□ -0.83
SHPRH-211ENST00000629427 UMODP07911 640 aa9.87□□□□□ -0.83
SHPRH-211ENST00000629427 DEFB121Q5J5C9 76 aa9.87□□□□□ -0.83
SHPRH-211ENST00000629427 PARD6GQ9BYG4 376 aaPredicted RBP9.87□□□□□ -0.83
SHPRH-211ENST00000629427 TRAV40A0A0B4J280 105 aa9.86□□□□□ -0.83
SHPRH-211ENST00000629427 ZNF415Q09FC8 603 aa9.86□□□□□ -0.83
SHPRH-211ENST00000629427 GGACTQ9BVM4 153 aa9.86□□□□□ -0.83
SHPRH-211ENST00000629427 TICRRQ7Z2Z1 1910 aa9.86□□□□□ -0.83
SHPRH-211ENST00000629427 CXorf65A6NEN9 183 aa9.86□□□□□ -0.83
SHPRH-211ENST00000629427 ZNF688P0C7X2 276 aa9.86□□□□□ -0.83
SHPRH-211ENST00000629427 ZP1P60852 638 aa9.86□□□□□ -0.83
SHPRH-211ENST00000629427 ZNF837Q96EG3 531 aaPredicted RBP9.86□□□□□ -0.83
SHPRH-211ENST00000629427 GATA2P23769 480 aaPredicted RBP9.86□□□□□ -0.83
SHPRH-211ENST00000629427 ZNF585BQ52M93 769 aa9.86□□□□□ -0.83
SHPRH-211ENST00000629427 TM2D1Q9BX74 207 aa9.86□□□□□ -0.83
SHPRH-211ENST00000629427 DPRXA6NFQ7 191 aa9.86□□□□□ -0.83
SHPRH-211ENST00000629427 LEPP41159 167 aa9.86□□□□□ -0.83
SHPRH-211ENST00000629427 ZGRF1Q86YA3 2104 aa9.86□□□□□ -0.83
SHPRH-211ENST00000629427 APOMO95445 188 aa9.86□□□□□ -0.83
SHPRH-211ENST00000629427 PSMG3Q9BT73 122 aaPredicted RBP9.86□□□□□ -0.83
SHPRH-211ENST00000629427 OR9G4Q8NGQ1 327 aa9.85□□□□□ -0.83
SHPRH-211ENST00000629427 C11orf68Q9H3H3 251 aaKnown RBP9.85□□□□□ -0.83
SHPRH-211ENST00000629427 MRPS18CQ9Y3D5 142 aaKnown RBP9.85□□□□□ -0.83
SHPRH-211ENST00000629427 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.85□□□□□ -0.83
SHPRH-211ENST00000629427 SAA2-SAA4A0A096LPE2 208 aa9.85□□□□□ -0.83
SHPRH-211ENST00000629427 SAA2P0DJI9 122 aaPredicted RBP9.85□□□□□ -0.83
SHPRH-211ENST00000629427 IFITM3Q01628 133 aa9.85□□□□□ -0.83
SHPRH-211ENST00000629427 RPP21Q9H633 154 aaKnown RBP9.85□□□□□ -0.83
SHPRH-211ENST00000629427 IL36BQ9NZH7 164 aa9.85□□□□□ -0.83
SHPRH-211ENST00000629427 EP300Q09472 2414 aaPredicted RBP9.85□□□□□ -0.83
SHPRH-211ENST00000629427 FNDC1Q4ZHG4 1894 aaPredicted RBP9.85□□□□□ -0.83
SHPRH-211ENST00000629427 ZNF324BQ6AW86 544 aaPredicted RBP9.85□□□□□ -0.83
SHPRH-211ENST00000629427 CD200R1LQ6Q8B3 271 aa9.85□□□□□ -0.83
SHPRH-211ENST00000629427 FAM90A1Q86YD7 464 aa9.85□□□□□ -0.83
SHPRH-211ENST00000629427 C10orf126Q8N4M7 172 aa9.85□□□□□ -0.83
SHPRH-211ENST00000629427 VCX2Q9H322 139 aa9.85□□□□□ -0.83
SHPRH-211ENST00000629427 SNAI2O43623 268 aa9.84□□□□□ -0.83
SHPRH-211ENST00000629427 RHOGP84095 191 aa9.84□□□□□ -0.83
SHPRH-211ENST00000629427 MIR17HGQ75NE6 70 aa9.84□□□□□ -0.83
SHPRH-211ENST00000629427 RCC1LQ96I51 464 aaKnown RBP9.84□□□□□ -0.83
SHPRH-211ENST00000629427 SPRR3Q9UBC9 169 aa9.84□□□□□ -0.83
SHPRH-211ENST00000629427 DTX2Q86UW9 622 aa9.84□□□□□ -0.83
SHPRH-211ENST00000629427 SLC25A28Q96A46 364 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms