RNA–Protein interactions for RNA: ENST00000628857.1

CNOT1-223, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5 BASIC

Gene CNOT1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-223ENST00000628857 IGF2BP2-AS1Q96M15 143 aa2.15□□□□□ -2.07
CNOT1-223ENST00000628857 RTL8AQ9BWD3 113 aa2.15□□□□□ -2.07
CNOT1-223ENST00000628857 DUSP21Q9H596 190 aa2.15□□□□□ -2.07
CNOT1-223ENST00000628857 PDFQ9HBH1 243 aa2.15□□□□□ -2.07
CNOT1-223ENST00000628857 DAZ1Q9NQZ3 744 aaKnown RBP2.15□□□□□ -2.07
CNOT1-223ENST00000628857 DAZ3Q9NR90 486 aaKnown RBP2.15□□□□□ -2.07
CNOT1-223ENST00000628857 HEBP1Q9NRV9 189 aa2.15□□□□□ -2.07
CNOT1-223ENST00000628857 ZNF226Q9NYT6 803 aa2.15□□□□□ -2.07
CNOT1-223ENST00000628857 PCTPQ9UKL6 214 aa2.15□□□□□ -2.07
CNOT1-223ENST00000628857 ZNF257Q9Y2Q1 563 aa2.15□□□□□ -2.07
CNOT1-223ENST00000628857 TPRKBQ9Y3C4 175 aa2.15□□□□□ -2.07
CNOT1-223ENST00000628857 MRPS16Q9Y3D3 137 aaKnown RBP2.15□□□□□ -2.07
CNOT1-223ENST00000628857 FLVCR1Q9Y5Y0 555 aa2.15□□□□□ -2.07
CNOT1-223ENST00000628857 HEBP2Q9Y5Z4 205 aa2.15□□□□□ -2.07
CNOT1-223ENST00000628857 ABCA6Q8N139 1617 aa2.15□□□□□ -2.07
CNOT1-223ENST00000628857 FER1L6Q2WGJ9 1857 aa2.15□□□□□ -2.07
CNOT1-223ENST00000628857 ARHGAP5Q13017 1502 aa2.15□□□□□ -2.07
CNOT1-223ENST00000628857 URB2Q14146 1524 aaKnown RBP2.15□□□□□ -2.07
CNOT1-223ENST00000628857 ARAP3Q8WWN8 1544 aa2.15□□□□□ -2.07
CNOT1-223ENST00000628857 RGPD4Q7Z3J3 1758 aa2.15□□□□□ -2.07
CNOT1-223ENST00000628857 RBBP6Q7Z6E9 1792 aaKnown RBP2.15□□□□□ -2.07
CNOT1-223ENST00000628857 SCN1AP35498 2009 aa2.15□□□□□ -2.07
CNOT1-223ENST00000628857 CFAP43Q8NDM7 1665 aa2.15□□□□□ -2.07
CNOT1-223ENST00000628857 QRICH2Q9H0J4 1663 aa2.15□□□□□ -2.07
CNOT1-223ENST00000628857 SBF2Q86WG5 1849 aa2.14□□□□□ -2.07
CNOT1-223ENST00000628857 COL1A2P08123 1366 aa2.14□□□□□ -2.07
CNOT1-223ENST00000628857 TARBP1Q13395 1621 aaKnown RBP2.14□□□□□ -2.07
CNOT1-223ENST00000628857 HECW1Q76N89 1606 aa2.14□□□□□ -2.07
CNOT1-223ENST00000628857 IQGAP3Q86VI3 1631 aa2.14□□□□□ -2.07
CNOT1-223ENST00000628857 KIF26AQ9ULI4 1882 aaPredicted RBP2.14□□□□□ -2.07
CNOT1-223ENST00000628857 TRGV10A0A0A0MS01 117 aa2.14□□□□□ -2.07
CNOT1-223ENST00000628857 TRAV8-6A0A0B4J262 113 aa2.14□□□□□ -2.07
CNOT1-223ENST00000628857 KLF18A0A0U1RQI7 1052 aa2.14□□□□□ -2.07
CNOT1-223ENST00000628857 A0A1B0GXF2 115 aa2.14□□□□□ -2.07
CNOT1-223ENST00000628857 WI2-2373I1.2A0A1W2PRP0 233 aa2.14□□□□□ -2.07
CNOT1-223ENST00000628857 TCRBV3S1A0A5B6 114 aa2.14□□□□□ -2.07
CNOT1-223ENST00000628857 OR51F1A6NGY5 319 aa2.14□□□□□ -2.07
CNOT1-223ENST00000628857 CD300LBA8K4G0 201 aa2.14□□□□□ -2.07
CNOT1-223ENST00000628857 H3BP45 60 aa2.14□□□□□ -2.07
CNOT1-223ENST00000628857 XKRYO14609 159 aa2.14□□□□□ -2.07
CNOT1-223ENST00000628857 GSTZ1O43708 216 aaPredicted RBP2.14□□□□□ -2.07
CNOT1-223ENST00000628857 ANGPTL7O43827 346 aa2.14□□□□□ -2.07
CNOT1-223ENST00000628857 SS18L1O75177 396 aaPredicted RBP2.14□□□□□ -2.07
CNOT1-223ENST00000628857 KLF7O75840 302 aaPredicted RBP2.14□□□□□ -2.07
CNOT1-223ENST00000628857 APOMO95445 188 aa2.14□□□□□ -2.07
CNOT1-223ENST00000628857 CYB5AP00167 134 aa2.14□□□□□ -2.07
CNOT1-223ENST00000628857 MT-ND6P03923 174 aa2.14□□□□□ -2.07
CNOT1-223ENST00000628857 SEC11BP0C7V7 166 aa2.14□□□□□ -2.07
CNOT1-223ENST00000628857 P0DMU3 169 aa2.14□□□□□ -2.07
CNOT1-223ENST00000628857 FAM231AP0DMU4 169 aa2.14□□□□□ -2.07
CNOT1-223ENST00000628857 FAM231CP0DMU5 169 aa2.14□□□□□ -2.07
CNOT1-223ENST00000628857 SMIM10L2AP0DMW4 78 aa2.14□□□□□ -2.07
CNOT1-223ENST00000628857 SMIM10L2BP0DMW5 78 aa2.14□□□□□ -2.07
CNOT1-223ENST00000628857 CCL1P22362 96 aa2.14□□□□□ -2.07
CNOT1-223ENST00000628857 GADD45AP24522 165 aa2.14□□□□□ -2.07
CNOT1-223ENST00000628857 CRYBB3P26998 211 aa2.14□□□□□ -2.07
CNOT1-223ENST00000628857 SRP14P37108 136 aaKnown RBP2.14□□□□□ -2.07
CNOT1-223ENST00000628857 OPRK1P41145 380 aa2.14□□□□□ -2.07
CNOT1-223ENST00000628857 PSMB2P49721 201 aa2.14□□□□□ -2.07
CNOT1-223ENST00000628857 TMEM258P61165 79 aa2.14□□□□□ -2.07
CNOT1-223ENST00000628857 CXCL6P80162 114 aa2.14□□□□□ -2.07
CNOT1-223ENST00000628857 NDPQ00604 133 aa2.14□□□□□ -2.07
CNOT1-223ENST00000628857 PNOCQ13519 176 aa2.14□□□□□ -2.07
CNOT1-223ENST00000628857 ENDOGQ14249 297 aaKnown RBP2.14□□□□□ -2.07
CNOT1-223ENST00000628857 MSMO1Q15800 293 aa2.14□□□□□ -2.07
CNOT1-223ENST00000628857 ZNF141Q15928 474 aa2.14□□□□□ -2.07
CNOT1-223ENST00000628857 ZNF79Q15937 498 aa2.14□□□□□ -2.07
CNOT1-223ENST00000628857 RTL8BQ17RB0 113 aa2.14□□□□□ -2.07
CNOT1-223ENST00000628857 NSUN5P1Q3KNT7 163 aa2.14□□□□□ -2.07
CNOT1-223ENST00000628857 CENPWQ5EE01 88 aa2.14□□□□□ -2.07
CNOT1-223ENST00000628857 LCN12Q6JVE5 192 aa2.14□□□□□ -2.07
CNOT1-223ENST00000628857 LCN8Q6JVE9 175 aa2.14□□□□□ -2.07
CNOT1-223ENST00000628857 UFSP1Q6NVU6 142 aa2.14□□□□□ -2.07
CNOT1-223ENST00000628857 MORN3Q6PF18 240 aaPredicted RBP2.14□□□□□ -2.07
CNOT1-223ENST00000628857 TMEM14EPQ6UXP3 125 aa2.14□□□□□ -2.07
CNOT1-223ENST00000628857 TEX43Q6ZNM6 134 aa2.14□□□□□ -2.07
CNOT1-223ENST00000628857 ZNF493Q6ZR52 646 aa2.14□□□□□ -2.07
CNOT1-223ENST00000628857 Q6ZRU5 148 aa2.14□□□□□ -2.07
CNOT1-223ENST00000628857 Q6ZUT4 128 aa2.14□□□□□ -2.07
CNOT1-223ENST00000628857 ZNF571Q7Z3V5 609 aaPredicted RBP2.14□□□□□ -2.07
CNOT1-223ENST00000628857 ATP5L2Q7Z4Y8 100 aa2.14□□□□□ -2.07
CNOT1-223ENST00000628857 C9orf40Q8IXQ3 194 aa2.14□□□□□ -2.07
CNOT1-223ENST00000628857 SLC25A45Q8N413 288 aa2.14□□□□□ -2.07
CNOT1-223ENST00000628857 OR5D16Q8NGK9 328 aa2.14□□□□□ -2.07
CNOT1-223ENST00000628857 OR4K13Q8NH42 304 aa2.14□□□□□ -2.07
CNOT1-223ENST00000628857 OR52P1PQ8NH57 321 aa2.14□□□□□ -2.07
CNOT1-223ENST00000628857 C10orf82Q8WW14 230 aa2.14□□□□□ -2.07
CNOT1-223ENST00000628857 SPACA5Q96QH8 159 aa2.14□□□□□ -2.07
CNOT1-223ENST00000628857 PEBP4Q96S96 227 aa2.14□□□□□ -2.07
CNOT1-223ENST00000628857 NMNAT3Q96T66 252 aa2.14□□□□□ -2.07
CNOT1-223ENST00000628857 LINC01587Q99440 93 aa2.14□□□□□ -2.07
CNOT1-223ENST00000628857 SDF2Q99470 211 aa2.14□□□□□ -2.07
CNOT1-223ENST00000628857 SNRNP25Q9BV90 132 aaKnown RBP2.14□□□□□ -2.07
CNOT1-223ENST00000628857 KRTAP4-4Q9BYR3 166 aa2.14□□□□□ -2.07
CNOT1-223ENST00000628857 SLIRPQ9GZT3 109 aaKnown RBP2.14□□□□□ -2.07
CNOT1-223ENST00000628857 EIF5A2Q9GZV4 153 aaKnown RBP2.14□□□□□ -2.07
CNOT1-223ENST00000628857 TMEM106BQ9NUM4 274 aa2.14□□□□□ -2.07
CNOT1-223ENST00000628857 RBM12B-AS1Q9P1G2 102 aa2.14□□□□□ -2.07
CNOT1-223ENST00000628857 DPM3Q9P2X0 92 aa2.14□□□□□ -2.07
CNOT1-223ENST00000628857 MARCOQ9UEW3 520 aaPredicted RBP2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms