RNA–Protein interactions for RNA: ENST00000628515.2

NRXN1-229, Transcript of neurexin 1, humanhuman

TSL 5 BASIC

Gene NRXN1, Length 3,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-229ENST00000628515 ABCA1O95477 2261 aa13.25□□□□□ -0.29
NRXN1-229ENST00000628515 YLPM1P49750 1951 aaKnown RBP13.25□□□□□ -0.29
NRXN1-229ENST00000628515 C9JCJ5 164 aa13.25□□□□□ -0.29
NRXN1-229ENST00000628515 PRSS46E5RG02 174 aa13.25□□□□□ -0.29
NRXN1-229ENST00000628515 NDUFB8O95169 186 aa13.25□□□□□ -0.29
NRXN1-229ENST00000628515 IGHV3-48P01763 117 aa13.25□□□□□ -0.29
NRXN1-229ENST00000628515 FAM201AQ5SY85 155 aa13.25□□□□□ -0.29
NRXN1-229ENST00000628515 LYG1Q8N1E2 194 aa13.25□□□□□ -0.29
NRXN1-229ENST00000628515 TSKUQ8WUA8 353 aa13.25□□□□□ -0.29
NRXN1-229ENST00000628515 HES4Q9HCC6 221 aa13.25□□□□□ -0.29
NRXN1-229ENST00000628515 KALRNO60229 2985 aa13.25□□□□□ -0.29
NRXN1-229ENST00000628515 TRGV5A0A0B4J1U4 118 aa13.24□□□□□ -0.29
NRXN1-229ENST00000628515 C15orf65H3BRN8 121 aa13.24□□□□□ -0.29
NRXN1-229ENST00000628515 STUMQ69YW2 141 aa13.24□□□□□ -0.29
NRXN1-229ENST00000628515 C1orf229Q6ZS94 237 aaPredicted RBP13.24□□□□□ -0.29
NRXN1-229ENST00000628515 ZNF355PQ9NSJ1 428 aa13.24□□□□□ -0.29
NRXN1-229ENST00000628515 SPRR3Q9UBC9 169 aa13.24□□□□□ -0.29
NRXN1-229ENST00000628515 RPH3ALQ9UNE2 315 aa13.24□□□□□ -0.29
NRXN1-229ENST00000628515 LSM4Q9Y4Z0 139 aaKnown RBP13.24□□□□□ -0.29
NRXN1-229ENST00000628515 TRAV9-1A0A075B6T8 112 aa13.24□□□□□ -0.29
NRXN1-229ENST00000628515 SP1P08047 785 aa13.24□□□□□ -0.29
NRXN1-229ENST00000628515 MFAP2P55001 183 aa13.24□□□□□ -0.29
NRXN1-229ENST00000628515 SLAQ13239 276 aa13.24□□□□□ -0.29
NRXN1-229ENST00000628515 OR4A47Q6IF82 309 aa13.24□□□□□ -0.29
NRXN1-229ENST00000628515 TRAV5A0A0B4J249 113 aa13.24□□□□□ -0.29
NRXN1-229ENST00000628515 CCL25O15444 150 aa13.24□□□□□ -0.29
NRXN1-229ENST00000628515 AMY1AP04745 511 aa13.24□□□□□ -0.29
NRXN1-229ENST00000628515 RBX1P62877 108 aa13.24□□□□□ -0.29
NRXN1-229ENST00000628515 SAPCD1Q5SSQ6 148 aa13.24□□□□□ -0.29
NRXN1-229ENST00000628515 TRIB1Q96RU8 372 aa13.24□□□□□ -0.29
NRXN1-229ENST00000628515 CLEC7AQ9BXN2 247 aa13.24□□□□□ -0.29
NRXN1-229ENST00000628515 GGTLC3B5MD39 225 aa13.23□□□□□ -0.29
NRXN1-229ENST00000628515 C21orf140B9A014 251 aa13.23□□□□□ -0.29
NRXN1-229ENST00000628515 MT-ND6P03923 174 aa13.23□□□□□ -0.29
NRXN1-229ENST00000628515 MRPL52Q86TS9 123 aaKnown RBP13.23□□□□□ -0.29
NRXN1-229ENST00000628515 NIT1Q86X76 327 aa13.23□□□□□ -0.29
NRXN1-229ENST00000628515 WDR31Q8NA23 367 aa13.23□□□□□ -0.29
NRXN1-229ENST00000628515 TRBV9A0A0B4J1U6 114 aa13.23□□□□□ -0.29
NRXN1-229ENST00000628515 KLRC4-KLRK1H3BQV0 150 aa13.23□□□□□ -0.29
NRXN1-229ENST00000628515 M0R2Z0 102 aa13.23□□□□□ -0.29
NRXN1-229ENST00000628515 TMEM11P17152 192 aa13.23□□□□□ -0.29
NRXN1-229ENST00000628515 DEFB108BQ8NET1 73 aa13.23□□□□□ -0.29
NRXN1-229ENST00000628515 CTRLP40313 264 aa13.22□□□□□ -0.29
NRXN1-229ENST00000628515 CLEC2AQ6UVW9 174 aa13.22□□□□□ -0.29
NRXN1-229ENST00000628515 ZNF439Q8NDP4 499 aa13.22□□□□□ -0.29
NRXN1-229ENST00000628515 OR4S2Q8NH73 311 aa13.22□□□□□ -0.29
NRXN1-229ENST00000628515 OR9G1Q8NH87 305 aa13.22□□□□□ -0.29
NRXN1-229ENST00000628515 C22orf15Q8WYQ4 148 aa13.22□□□□□ -0.29
NRXN1-229ENST00000628515 C11orf52Q96A22 123 aa13.22□□□□□ -0.29
NRXN1-229ENST00000628515 PRRX1P54821 245 aa13.22□□□□□ -0.29
NRXN1-229ENST00000628515 TNXAQ16473 311 aa13.22□□□□□ -0.29
NRXN1-229ENST00000628515 TRAT1Q6PIZ9 186 aa13.22□□□□□ -0.29
NRXN1-229ENST00000628515 KLHDC1Q8N7A1 406 aa13.22□□□□□ -0.29
NRXN1-229ENST00000628515 TECRQ9NZ01 308 aaKnown RBP13.22□□□□□ -0.29
NRXN1-229ENST00000628515 C15orf61A6NNL5 157 aa13.22□□□□□ -0.29
NRXN1-229ENST00000628515 H0Y8G0 127 aa13.22□□□□□ -0.29
NRXN1-229ENST00000628515 HLA-DQA1P01909 254 aa13.22□□□□□ -0.29
NRXN1-229ENST00000628515 HSPE1P61604 102 aaKnown RBP13.22□□□□□ -0.29
NRXN1-229ENST00000628515 RPL8P62917 257 aaKnown RBP13.22□□□□□ -0.29
NRXN1-229ENST00000628515 PMCHL1Q16048 86 aa13.22□□□□□ -0.29
NRXN1-229ENST00000628515 OR10J3Q5JRS4 329 aa13.22□□□□□ -0.29
NRXN1-229ENST00000628515 IFI27L2Q9H2X8 130 aa13.22□□□□□ -0.29
NRXN1-229ENST00000628515 TMEM167BQ9NRX6 74 aa13.22□□□□□ -0.29
NRXN1-229ENST00000628515 OR51B2Q9Y5P1 312 aa13.22□□□□□ -0.29
NRXN1-229ENST00000628515 SPTAN1Q13813 2472 aaKnown RBP13.21□□□□□ -0.29
NRXN1-229ENST00000628515 A0A1W2PN81 502 aa13.21□□□□□ -0.29
NRXN1-229ENST00000628515 PLAUP00749 431 aa13.21□□□□□ -0.29
NRXN1-229ENST00000628515 AREGP15514 252 aa13.21□□□□□ -0.29
NRXN1-229ENST00000628515 LHFPL4Q7Z7J7 247 aa13.21□□□□□ -0.29
NRXN1-229ENST00000628515 FER1L6-AS2Q96M78 137 aa13.21□□□□□ -0.29
NRXN1-229ENST00000628515 ZNRD1Q9P1U0 126 aa13.21□□□□□ -0.29
NRXN1-229ENST00000628515 KLF13Q9Y2Y9 288 aaPredicted RBP13.21□□□□□ -0.29
NRXN1-229ENST00000628515 J3QR06 171 aa13.21□□□□□ -0.29
NRXN1-229ENST00000628515 CRYABP02511 175 aaKnown RBP13.21□□□□□ -0.29
NRXN1-229ENST00000628515 LINC00869P0C866 280 aa13.21□□□□□ -0.29
NRXN1-229ENST00000628515 UBE2L3P68036 154 aaKnown RBP13.21□□□□□ -0.29
NRXN1-229ENST00000628515 COL27A1Q8IZC6 1860 aaPredicted RBP13.21□□□□□ -0.3
NRXN1-229ENST00000628515 CD24P25063 80 aa13.2□□□□□ -0.3
NRXN1-229ENST00000628515 TSPOP30536 169 aa13.2□□□□□ -0.3
NRXN1-229ENST00000628515 RND1Q92730 232 aa13.2□□□□□ -0.3
NRXN1-229ENST00000628515 CHODLQ9H9P2 273 aa13.2□□□□□ -0.3
NRXN1-229ENST00000628515 CLEC5AQ9NY25 188 aa13.2□□□□□ -0.3
NRXN1-229ENST00000628515 IGKV1D-17A0A075B6S4 117 aa13.2□□□□□ -0.3
NRXN1-229ENST00000628515 IGKV1OR2-108A0A075B7D4 117 aa13.2□□□□□ -0.3
NRXN1-229ENST00000628515 M0QZ24 198 aa13.2□□□□□ -0.3
NRXN1-229ENST00000628515 CD46P15529 392 aa13.2□□□□□ -0.3
NRXN1-229ENST00000628515 ZNF503Q96F45 646 aa13.2□□□□□ -0.3
NRXN1-229ENST00000628515 OSTCQ9NRP0 149 aa13.2□□□□□ -0.3
NRXN1-229ENST00000628515 BET1LQ9NYM9 111 aa13.2□□□□□ -0.3
NRXN1-229ENST00000628515 SAA2-SAA4A0A096LPE2 208 aa13.2□□□□□ -0.3
NRXN1-229ENST00000628515 SH2D7A6NKC9 451 aaPredicted RBP13.2□□□□□ -0.3
NRXN1-229ENST00000628515 PRSS47A8MTI9 375 aa13.2□□□□□ -0.3
NRXN1-229ENST00000628515 SAA2P0DJI9 122 aaPredicted RBP13.2□□□□□ -0.3
NRXN1-229ENST00000628515 MORN5Q5VZ52 161 aa13.2□□□□□ -0.3
NRXN1-229ENST00000628515 LEMD1Q68G75 181 aa13.2□□□□□ -0.3
NRXN1-229ENST00000628515 C18orf32Q8TCD1 76 aa13.2□□□□□ -0.3
NRXN1-229ENST00000628515 TM4SF5O14894 197 aa13.19□□□□□ -0.3
NRXN1-229ENST00000628515 PYYP10082 97 aa13.19□□□□□ -0.3
NRXN1-229ENST00000628515 TMPRSS3P57727 454 aa13.19□□□□□ -0.3
NRXN1-229ENST00000628515 OR52E5Q8NH55 327 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms