RNA–Protein interactions for RNA: ENST00000623253.4

CD99-211, Transcript of CD99 molecule (Xg blood group), humanhuman

TSL 1 (best)

Gene CD99, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD99-211ENST00000623253 RELQ04864 619 aaPredicted RBP11.87□□□□□ -0.51
CD99-211ENST00000623253 ATP6V0BQ99437 205 aa11.87□□□□□ -0.51
CD99-211ENST00000623253 C11orf68Q9H3H3 251 aaKnown RBP11.87□□□□□ -0.51
CD99-211ENST00000623253 PRNDQ9UKY0 176 aa11.87□□□□□ -0.51
CD99-211ENST00000623253 PCLOQ9Y6V0 5065 aa11.86□□□□□ -0.51
CD99-211ENST00000623253 IGLL5B9A064 214 aa11.86□□□□□ -0.51
CD99-211ENST00000623253 RCVRNP35243 200 aa11.86□□□□□ -0.51
CD99-211ENST00000623253 G6PCP35575 357 aa11.86□□□□□ -0.51
CD99-211ENST00000623253 VBP1P61758 197 aa11.86□□□□□ -0.51
CD99-211ENST00000623253 PHLDA2Q53GA4 152 aa11.86□□□□□ -0.51
CD99-211ENST00000623253 SNX29P2Q8IUI4 249 aa11.86□□□□□ -0.51
CD99-211ENST00000623253 MISP3Q96FF7 219 aa11.86□□□□□ -0.51
CD99-211ENST00000623253 TMEM56Q96MV1 263 aa11.86□□□□□ -0.51
CD99-211ENST00000623253 FAM212BQ9NTI7 297 aaPredicted RBP11.86□□□□□ -0.51
CD99-211ENST00000623253 FKBP11Q9NYL4 201 aa11.86□□□□□ -0.51
CD99-211ENST00000623253 TRAV14DV4A0A0A6YYC5 116 aa11.85□□□□□ -0.51
CD99-211ENST00000623253 RORCP51449 518 aa11.85□□□□□ -0.51
CD99-211ENST00000623253 PAFAH1B2P68402 229 aa11.85□□□□□ -0.51
CD99-211ENST00000623253 TMEM187Q14656 261 aa11.85□□□□□ -0.51
CD99-211ENST00000623253 TSC22D3Q99576 134 aa11.85□□□□□ -0.51
CD99-211ENST00000623253 HPGDSO60760 199 aa11.84□□□□□ -0.51
CD99-211ENST00000623253 IGHV3-48P01763 117 aa11.84□□□□□ -0.51
CD99-211ENST00000623253 ELK1P19419 428 aa11.84□□□□□ -0.51
CD99-211ENST00000623253 UCP3P55916 312 aa11.84□□□□□ -0.51
CD99-211ENST00000623253 TCTAP57738 103 aa11.84□□□□□ -0.51
CD99-211ENST00000623253 RPL11P62913 178 aaKnown RBP11.84□□□□□ -0.51
CD99-211ENST00000623253 LEMD1Q68G75 181 aa11.84□□□□□ -0.51
CD99-211ENST00000623253 TCF24Q7RTU0 167 aa11.84□□□□□ -0.51
CD99-211ENST00000623253 KIAA1109Q2LD37 5005 aa11.83□□□□□ -0.52
CD99-211ENST00000623253 C15orf61A6NNL5 157 aa11.83□□□□□ -0.52
CD99-211ENST00000623253 DNASE2O00115 360 aaPredicted RBP11.83□□□□□ -0.52
CD99-211ENST00000623253 MFAP4P55083 255 aa11.83□□□□□ -0.52
CD99-211ENST00000623253 MZT2AQ6P582 158 aa11.83□□□□□ -0.52
CD99-211ENST00000623253 TBC1D26Q86UD7 250 aa11.83□□□□□ -0.52
CD99-211ENST00000623253 OR1P1Q8NH06 330 aa11.83□□□□□ -0.52
CD99-211ENST00000623253 AP3S1Q92572 193 aa11.83□□□□□ -0.52
CD99-211ENST00000623253 OR10C1Q96KK4 312 aa11.83□□□□□ -0.52
CD99-211ENST00000623253 TMEM14BQ9NUH8 114 aa11.83□□□□□ -0.52
CD99-211ENST00000623253 IGHV3-66A0A0C4DH42 116 aa11.82□□□□□ -0.52
CD99-211ENST00000623253 DBX1A6NMT0 343 aa11.82□□□□□ -0.52
CD99-211ENST00000623253 FAM25AB3EWG3 89 aa11.82□□□□□ -0.52
CD99-211ENST00000623253 FAM25CB3EWG5 89 aa11.82□□□□□ -0.52
CD99-211ENST00000623253 FAM25GB3EWG6 89 aa11.82□□□□□ -0.52
CD99-211ENST00000623253 DEFB131AP59861 70 aa11.82□□□□□ -0.52
CD99-211ENST00000623253 FAM90A2PQ658T7 463 aa11.82□□□□□ -0.52
CD99-211ENST00000623253 PINX1Q96BK5 328 aaKnown RBP11.82□□□□□ -0.52
CD99-211ENST00000623253 ZNF414Q96IQ9 312 aa11.82□□□□□ -0.52
CD99-211ENST00000623253 NXF2Q9GZY0 626 aaKnown RBP11.82□□□□□ -0.52
CD99-211ENST00000623253 APLNQ9ULZ1 77 aa11.82□□□□□ -0.52
CD99-211ENST00000623253 ST8SIA3O43173 380 aa11.81□□□□□ -0.52
CD99-211ENST00000623253 GNG7O60262 68 aa11.81□□□□□ -0.52
CD99-211ENST00000623253 MT-CO2P00403 227 aa11.81□□□□□ -0.52
CD99-211ENST00000623253 H2BFWTQ7Z2G1 175 aa11.81□□□□□ -0.52
CD99-211ENST00000623253 OR4A16Q8NH70 328 aa11.81□□□□□ -0.52
CD99-211ENST00000623253 ST8SIA2Q92186 375 aa11.81□□□□□ -0.52
CD99-211ENST00000623253 SEC22AQ96IW7 307 aa11.81□□□□□ -0.52
CD99-211ENST00000623253 TXN2Q99757 166 aa11.81□□□□□ -0.52
CD99-211ENST00000623253 GINS3Q9BRX5 216 aa11.81□□□□□ -0.52
CD99-211ENST00000623253 MS4A6AQ9H2W1 248 aa11.81□□□□□ -0.52
CD99-211ENST00000623253 C11orf94C9JXX5 98 aa11.8□□□□□ -0.52
CD99-211ENST00000623253 I3L2K1 104 aa11.8□□□□□ -0.52
CD99-211ENST00000623253 DFFBO76075 338 aa11.8□□□□□ -0.52
CD99-211ENST00000623253 GABARAPO95166 117 aa11.8□□□□□ -0.52
CD99-211ENST00000623253 APOHP02749 345 aaPredicted RBP11.8□□□□□ -0.52
CD99-211ENST00000623253 STHQ8IWL8 128 aa11.8□□□□□ -0.52
CD99-211ENST00000623253 CENPSQ8N2Z9 138 aa11.8□□□□□ -0.52
CD99-211ENST00000623253 RABAC1Q9UI14 185 aa11.8□□□□□ -0.52
CD99-211ENST00000623253 M0QYG6 137 aa11.79□□□□□ -0.52
CD99-211ENST00000623253 IGKV1-39P01597 117 aa11.79□□□□□ -0.52
CD99-211ENST00000623253 IGKV1D-39P04432 117 aa11.79□□□□□ -0.52
CD99-211ENST00000623253 CD5P06127 495 aa11.79□□□□□ -0.52
CD99-211ENST00000623253 ZNF182P17025 639 aaPredicted RBP11.79□□□□□ -0.52
CD99-211ENST00000623253 HLA-DMBP28068 263 aa11.79□□□□□ -0.52
CD99-211ENST00000623253 RND3P61587 244 aa11.79□□□□□ -0.52
CD99-211ENST00000623253 PRCDQ00LT1 54 aa11.79□□□□□ -0.52
CD99-211ENST00000623253 CTF1Q16619 201 aa11.79□□□□□ -0.52
CD99-211ENST00000623253 RNASE10Q5GAN6 216 aaKnown RBP11.79□□□□□ -0.52
CD99-211ENST00000623253 TOMM20LQ6UXN7 152 aa11.79□□□□□ -0.52
CD99-211ENST00000623253 LILRB2Q8N423 598 aa11.79□□□□□ -0.52
CD99-211ENST00000623253 FAM24BQ8N5W8 94 aa11.79□□□□□ -0.52
CD99-211ENST00000623253 MRGPRFQ96AM1 343 aa11.79□□□□□ -0.52
CD99-211ENST00000623253 ZNF486Q96H40 463 aaPredicted RBP11.79□□□□□ -0.52
CD99-211ENST00000623253 NAA50Q9GZZ1 169 aaKnown RBP11.79□□□□□ -0.52
CD99-211ENST00000623253 EXTL2Q9UBQ6 330 aa11.79□□□□□ -0.52
CD99-211ENST00000623253 VPS13DQ5THJ4 4388 aa11.79□□□□□ -0.52
CD99-211ENST00000623253 HECTD4Q9Y4D8 3996 aa11.79□□□□□ -0.52
CD99-211ENST00000623253 IGHV4-28A0A0C4DH34 117 aa11.78□□□□□ -0.52
CD99-211ENST00000623253 SMIM18P0DKX4 95 aa11.78□□□□□ -0.52
CD99-211ENST00000623253 PGAM2P15259 253 aa11.78□□□□□ -0.52
CD99-211ENST00000623253 TBPP20226 339 aa11.78□□□□□ -0.52
CD99-211ENST00000623253 RNASE12Q5GAN4 147 aaKnown RBP11.78□□□□□ -0.52
CD99-211ENST00000623253 LHFPL1Q86WI0 220 aa11.78□□□□□ -0.52
CD99-211ENST00000623253 ARRDC1Q8N5I2 433 aa11.78□□□□□ -0.52
CD99-211ENST00000623253 Q8NAQ8 132 aa11.78□□□□□ -0.52
CD99-211ENST00000623253 ZNF114Q8NC26 417 aa11.78□□□□□ -0.52
CD99-211ENST00000623253 C15orf40Q8WUR7 153 aa11.78□□□□□ -0.52
CD99-211ENST00000623253 KLK11Q9UBX7 282 aa11.78□□□□□ -0.52
CD99-211ENST00000623253 RBMY1A1P0DJD3 496 aaKnown RBP11.77□□□□□ -0.53
CD99-211ENST00000623253 RBMY1CP0DJD4 496 aa11.77□□□□□ -0.53
CD99-211ENST00000623253 PIGPP57054 158 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms