RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 NXPH3O95157 252 aa10.64□□□□□ -0.71
PCDHGC3-208ENST00000622836 SULT1A3P0DMM9 295 aa10.64□□□□□ -0.71
PCDHGC3-208ENST00000622836 SULT1A4P0DMN0 295 aa10.64□□□□□ -0.71
PCDHGC3-208ENST00000622836 IL7P13232 177 aa10.64□□□□□ -0.71
PCDHGC3-208ENST00000622836 SPCS3P61009 180 aa10.64□□□□□ -0.71
PCDHGC3-208ENST00000622836 SUPT4H1P63272 117 aaKnown RBP10.64□□□□□ -0.71
PCDHGC3-208ENST00000622836 CD69Q07108 199 aa10.64□□□□□ -0.71
PCDHGC3-208ENST00000622836 LCN12Q6JVE5 192 aa10.64□□□□□ -0.71
PCDHGC3-208ENST00000622836 SDHCQ99643 169 aaPredicted RBP10.64□□□□□ -0.71
PCDHGC3-208ENST00000622836 PALMDQ9NP74 551 aa10.64□□□□□ -0.71
PCDHGC3-208ENST00000622836 GAR1Q9NY12 217 aaKnown RBP10.64□□□□□ -0.71
PCDHGC3-208ENST00000622836 SHPKQ9UHJ6 478 aa10.64□□□□□ -0.71
PCDHGC3-208ENST00000622836 DNAH3Q8TD57 4116 aa10.63□□□□□ -0.71
PCDHGC3-208ENST00000622836 C2orf70A6NJV1 201 aa10.63□□□□□ -0.71
PCDHGC3-208ENST00000622836 MT-CO2P00403 227 aa10.63□□□□□ -0.71
PCDHGC3-208ENST00000622836 MFAP4P55083 255 aa10.63□□□□□ -0.71
PCDHGC3-208ENST00000622836 CNPY1Q3B7I2 92 aa10.63□□□□□ -0.71
PCDHGC3-208ENST00000622836 SPSB3Q6PJ21 355 aa10.63□□□□□ -0.71
PCDHGC3-208ENST00000622836 LYZL2Q7Z4W2 148 aa10.63□□□□□ -0.71
PCDHGC3-208ENST00000622836 OR52E5Q8NH55 327 aa10.63□□□□□ -0.71
PCDHGC3-208ENST00000622836 HEYLQ9NQ87 328 aaPredicted RBP10.63□□□□□ -0.71
PCDHGC3-208ENST00000622836 SIGLEC8Q9NYZ4 499 aa10.63□□□□□ -0.71
PCDHGC3-208ENST00000622836 CACFD1Q9UGQ2 172 aa10.63□□□□□ -0.71
PCDHGC3-208ENST00000622836 INS-IGF2F8WCM5 200 aa10.62□□□□□ -0.71
PCDHGC3-208ENST00000622836 I3L2K1 104 aa10.62□□□□□ -0.71
PCDHGC3-208ENST00000622836 CORTO00230 105 aa10.62□□□□□ -0.71
PCDHGC3-208ENST00000622836 NUPL2O15504 423 aaKnown RBP10.62□□□□□ -0.71
PCDHGC3-208ENST00000622836 IGHV3-48P01763 117 aa10.62□□□□□ -0.71
PCDHGC3-208ENST00000622836 FOLR2P14207 255 aa10.62□□□□□ -0.71
PCDHGC3-208ENST00000622836 PPP1R1AQ13522 171 aa10.62□□□□□ -0.71
PCDHGC3-208ENST00000622836 OR1S1Q8NH92 325 aa10.62□□□□□ -0.71
PCDHGC3-208ENST00000622836 ATP6V0BQ99437 205 aa10.62□□□□□ -0.71
PCDHGC3-208ENST00000622836 C7orf50Q9BRJ6 194 aaKnown RBP10.62□□□□□ -0.71
PCDHGC3-208ENST00000622836 HIPK2Q9H2X6 1198 aa10.62□□□□□ -0.71
PCDHGC3-208ENST00000622836 UFC1Q9Y3C8 167 aa10.62□□□□□ -0.71
PCDHGC3-208ENST00000622836 SMAD5-AS1Q9Y6J3 95 aa10.62□□□□□ -0.71
PCDHGC3-208ENST00000622836 DUXBA0A1W2PPF3 345 aa10.61□□□□□ -0.71
PCDHGC3-208ENST00000622836 GNG7O60262 68 aa10.61□□□□□ -0.71
PCDHGC3-208ENST00000622836 NDUFB6O95139 128 aa10.61□□□□□ -0.71
PCDHGC3-208ENST00000622836 SFT2D2O95562 160 aa10.61□□□□□ -0.71
PCDHGC3-208ENST00000622836 RNASE2P10153 161 aaKnown RBP10.61□□□□□ -0.71
PCDHGC3-208ENST00000622836 CBLN1P23435 193 aa10.61□□□□□ -0.71
PCDHGC3-208ENST00000622836 OPRK1P41145 380 aa10.61□□□□□ -0.71
PCDHGC3-208ENST00000622836 HTR2BP41595 481 aa10.61□□□□□ -0.71
PCDHGC3-208ENST00000622836 SMCO1Q147U7 214 aa10.61□□□□□ -0.71
PCDHGC3-208ENST00000622836 NMSQ5H8A3 153 aa10.61□□□□□ -0.71
PCDHGC3-208ENST00000622836 DUSP18Q8NEJ0 188 aa10.61□□□□□ -0.71
PCDHGC3-208ENST00000622836 CACNG8Q8WXS5 425 aa10.61□□□□□ -0.71
PCDHGC3-208ENST00000622836 C20orf24Q9BUV8 137 aa10.61□□□□□ -0.71
PCDHGC3-208ENST00000622836 LSM4Q9Y4Z0 139 aaKnown RBP10.61□□□□□ -0.71
PCDHGC3-208ENST00000622836 TMEM213A2RRL7 107 aa10.6□□□□□ -0.71
PCDHGC3-208ENST00000622836 A6NHS1 94 aa10.6□□□□□ -0.71
PCDHGC3-208ENST00000622836 A8MWP6 167 aa10.6□□□□□ -0.71
PCDHGC3-208ENST00000622836 EDN2P20800 178 aa10.6□□□□□ -0.71
PCDHGC3-208ENST00000622836 NPBWR1P48145 328 aa10.6□□□□□ -0.71
PCDHGC3-208ENST00000622836 UBE2MP61081 183 aaKnown RBP10.6□□□□□ -0.71
PCDHGC3-208ENST00000622836 RELQ04864 619 aaPredicted RBP10.6□□□□□ -0.71
PCDHGC3-208ENST00000622836 ANKRD55Q3KP44 614 aa10.6□□□□□ -0.71
PCDHGC3-208ENST00000622836 CD300EQ496F6 205 aaPredicted RBP10.6□□□□□ -0.71
PCDHGC3-208ENST00000622836 AARDQ4LEZ3 155 aa10.6□□□□□ -0.71
PCDHGC3-208ENST00000622836 TM4SF20Q53R12 229 aa10.6□□□□□ -0.71
PCDHGC3-208ENST00000622836 UNQ9165/PRO28630Q6UXU0 137 aa10.6□□□□□ -0.71
PCDHGC3-208ENST00000622836 GTSCR1Q86UQ5 136 aa10.6□□□□□ -0.71
PCDHGC3-208ENST00000622836 SLC24A4Q8NFF2 622 aa10.6□□□□□ -0.71
PCDHGC3-208ENST00000622836 OR2K2Q8NGT1 345 aa10.6□□□□□ -0.71
PCDHGC3-208ENST00000622836 S100ZQ8WXG8 99 aa10.6□□□□□ -0.71
PCDHGC3-208ENST00000622836 TXN2Q99757 166 aa10.6□□□□□ -0.71
PCDHGC3-208ENST00000622836 B9D2Q9BPU9 175 aa10.6□□□□□ -0.71
PCDHGC3-208ENST00000622836 CHRDL1Q9BU40 450 aa10.6□□□□□ -0.71
PCDHGC3-208ENST00000622836 TECRQ9NZ01 308 aaKnown RBP10.6□□□□□ -0.71
PCDHGC3-208ENST00000622836 FLVCR2Q9UPI3 526 aa10.6□□□□□ -0.71
PCDHGC3-208ENST00000622836 SELENOKQ9Y6D0 94 aa10.6□□□□□ -0.71
PCDHGC3-208ENST00000622836 A0A1B0GU03 582 aa10.59□□□□□ -0.71
PCDHGC3-208ENST00000622836 NDUFA4O00483 81 aa10.59□□□□□ -0.71
PCDHGC3-208ENST00000622836 YIF1AO95070 293 aa10.59□□□□□ -0.71
PCDHGC3-208ENST00000622836 TNFRSF9Q07011 255 aa10.59□□□□□ -0.71
PCDHGC3-208ENST00000622836 GUCA2BQ16661 112 aa10.59□□□□□ -0.71
PCDHGC3-208ENST00000622836 C4orf46Q504U0 113 aa10.59□□□□□ -0.71
PCDHGC3-208ENST00000622836 ADAMTSL5Q6ZMM2 481 aa10.59□□□□□ -0.71
PCDHGC3-208ENST00000622836 LINC00299Q6ZSB3 139 aa10.59□□□□□ -0.71
PCDHGC3-208ENST00000622836 UXS1Q8NBZ7 420 aa10.59□□□□□ -0.71
PCDHGC3-208ENST00000622836 TMEM190Q8WZ59 177 aa10.59□□□□□ -0.71
PCDHGC3-208ENST00000622836 MARC2Q969Z3 335 aa10.59□□□□□ -0.71
PCDHGC3-208ENST00000622836 CCDC32Q9BV29 185 aa10.59□□□□□ -0.71
PCDHGC3-208ENST00000622836 ZNF436Q9C0F3 470 aaPredicted RBP10.59□□□□□ -0.71
PCDHGC3-208ENST00000622836 IGHV3OR16-8A0A075B7F1 116 aa10.58□□□□□ -0.72
PCDHGC3-208ENST00000622836 RPS10-NUDT3A0A1W2PQS6 291 aa10.58□□□□□ -0.72
PCDHGC3-208ENST00000622836 IZUMO1RA6ND01 250 aa10.58□□□□□ -0.72
PCDHGC3-208ENST00000622836 F8W735 103 aaPredicted RBP10.58□□□□□ -0.72
PCDHGC3-208ENST00000622836 LYRM1O43325 122 aa10.58□□□□□ -0.72
PCDHGC3-208ENST00000622836 SCGB2A1O75556 95 aa10.58□□□□□ -0.72
PCDHGC3-208ENST00000622836 IFNA10P01566 189 aa10.58□□□□□ -0.72
PCDHGC3-208ENST00000622836 CTSGP08311 255 aa10.58□□□□□ -0.72
PCDHGC3-208ENST00000622836 HOXB5P09067 269 aa10.58□□□□□ -0.72
PCDHGC3-208ENST00000622836 BTCP35070 178 aa10.58□□□□□ -0.72
PCDHGC3-208ENST00000622836 ADMP35318 185 aa10.58□□□□□ -0.72
PCDHGC3-208ENST00000622836 ELLP55199 621 aaPredicted RBP10.58□□□□□ -0.72
PCDHGC3-208ENST00000622836 DEFB114Q30KQ6 69 aa10.58□□□□□ -0.72
PCDHGC3-208ENST00000622836 BTNL8Q6UX41 500 aa10.58□□□□□ -0.72
PCDHGC3-208ENST00000622836 NOXA1Q86UR1 476 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms