RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 ARSJQ5FYB0 599 aaPredicted RBP14.03□□□□□ -0.16
PTCHD3-202ENST00000622555 TMEM170AQ8WVE7 144 aa14.03□□□□□ -0.16
PTCHD3-202ENST00000622555 P2RX4Q99571 388 aa14.03□□□□□ -0.16
PTCHD3-202ENST00000622555 FAM181BA6NEQ2 426 aa14.02□□□□□ -0.16
PTCHD3-202ENST00000622555 I3L521 148 aa14.02□□□□□ -0.16
PTCHD3-202ENST00000622555 IFNA4P05014 189 aa14.02□□□□□ -0.16
PTCHD3-202ENST00000622555 RNASE1P07998 156 aaKnown RBP14.02□□□□□ -0.16
PTCHD3-202ENST00000622555 EIF5AP63241 154 aaKnown RBP14.02□□□□□ -0.16
PTCHD3-202ENST00000622555 C2orf83Q53S99 150 aa14.02□□□□□ -0.16
PTCHD3-202ENST00000622555 OR8G2PQ6IF36 304 aa14.02□□□□□ -0.16
PTCHD3-202ENST00000622555 C19orf35Q6ZS72 473 aa14.02□□□□□ -0.16
PTCHD3-202ENST00000622555 TMEM217Q8N7C4 229 aa14.02□□□□□ -0.16
PTCHD3-202ENST00000622555 ZNF702PQ9H963 129 aa14.02□□□□□ -0.16
PTCHD3-202ENST00000622555 LINC00527Q9UJ94 153 aa14.02□□□□□ -0.16
PTCHD3-202ENST00000622555 TRAV41A0A0B4J266 112 aa14.01□□□□□ -0.17
PTCHD3-202ENST00000622555 NPIPB5A8MRT5 1133 aa14.01□□□□□ -0.17
PTCHD3-202ENST00000622555 G3V318 75 aa14.01□□□□□ -0.17
PTCHD3-202ENST00000622555 AP4M1O00189 453 aa14.01□□□□□ -0.17
PTCHD3-202ENST00000622555 IGF1P05019 195 aa14.01□□□□□ -0.17
PTCHD3-202ENST00000622555 DEFA4P12838 97 aa14.01□□□□□ -0.17
PTCHD3-202ENST00000622555 CTRB1P17538 263 aa14.01□□□□□ -0.17
PTCHD3-202ENST00000622555 ATP5IP56385 69 aaPredicted RBP14.01□□□□□ -0.17
PTCHD3-202ENST00000622555 BAXQ07812 192 aa14.01□□□□□ -0.17
PTCHD3-202ENST00000622555 CTRB2Q6GPI1 263 aa14.01□□□□□ -0.17
PTCHD3-202ENST00000622555 TTC9CQ8N5M4 171 aa14.01□□□□□ -0.17
PTCHD3-202ENST00000622555 ZNF114Q8NC26 417 aa14.01□□□□□ -0.17
PTCHD3-202ENST00000622555 OR5T1Q8NG75 326 aa14.01□□□□□ -0.17
PTCHD3-202ENST00000622555 BSCL2Q96G97 398 aaPredicted RBP14.01□□□□□ -0.17
PTCHD3-202ENST00000622555 ARV1Q9H2C2 271 aa14.01□□□□□ -0.17
PTCHD3-202ENST00000622555 F11RQ9Y624 299 aaKnown RBP14.01□□□□□ -0.17
PTCHD3-202ENST00000622555 FBXO24O75426 580 aa14.01□□□□□ -0.17
PTCHD3-202ENST00000622555 CRIP2P52943 208 aaPredicted RBP14.01□□□□□ -0.17
PTCHD3-202ENST00000622555 TMEM95Q3KNT9 176 aa14.01□□□□□ -0.17
PTCHD3-202ENST00000622555 AKIRIN2Q53H80 203 aa14.01□□□□□ -0.17
PTCHD3-202ENST00000622555 RPL7L1Q6DKI1 246 aaKnown RBP14.01□□□□□ -0.17
PTCHD3-202ENST00000622555 ETV3LQ6ZN32 361 aa14.01□□□□□ -0.17
PTCHD3-202ENST00000622555 HAPLN4Q86UW8 402 aa14.01□□□□□ -0.17
PTCHD3-202ENST00000622555 OR1P1Q8NH06 330 aa14.01□□□□□ -0.17
PTCHD3-202ENST00000622555 TMEM68Q96MH6 324 aa14.01□□□□□ -0.17
PTCHD3-202ENST00000622555 NOL4LQ96MY1 436 aaPredicted RBP14.01□□□□□ -0.17
PTCHD3-202ENST00000622555 WNT10AQ9GZT5 417 aa14.01□□□□□ -0.17
PTCHD3-202ENST00000622555 FBXL17Q9UF56 701 aa14.01□□□□□ -0.17
PTCHD3-202ENST00000622555 TCF21O43680 179 aa14□□□□□ -0.17
PTCHD3-202ENST00000622555 CRYGCP07315 174 aa14□□□□□ -0.17
PTCHD3-202ENST00000622555 OR10P1Q8NGE3 313 aa14□□□□□ -0.17
PTCHD3-202ENST00000622555 SMIM3Q9BZL3 60 aa14□□□□□ -0.17
PTCHD3-202ENST00000622555 PMS2P5A8MQ11 134 aa13.99□□□□□ -0.17
PTCHD3-202ENST00000622555 JTBO76095 146 aa13.99□□□□□ -0.17
PTCHD3-202ENST00000622555 CRYBA1P05813 215 aa13.99□□□□□ -0.17
PTCHD3-202ENST00000622555 MFAP2P55001 183 aa13.99□□□□□ -0.17
PTCHD3-202ENST00000622555 HBG1P69891 147 aa13.99□□□□□ -0.17
PTCHD3-202ENST00000622555 HBG2P69892 147 aa13.99□□□□□ -0.17
PTCHD3-202ENST00000622555 ARL16Q0P5N6 197 aa13.99□□□□□ -0.17
PTCHD3-202ENST00000622555 OR1S2Q8NGQ3 325 aa13.99□□□□□ -0.17
PTCHD3-202ENST00000622555 OR5C1Q8NGR4 320 aa13.99□□□□□ -0.17
PTCHD3-202ENST00000622555 FAM110DQ8TAY7 271 aaPredicted RBP13.99□□□□□ -0.17
PTCHD3-202ENST00000622555 TEP1Q99973 2627 aaKnown RBP13.99□□□□□ -0.17
PTCHD3-202ENST00000622555 PRH1P02810 166 aa13.98□□□□□ -0.17
PTCHD3-202ENST00000622555 SLC38A11Q08AI6 406 aa13.98□□□□□ -0.17
PTCHD3-202ENST00000622555 CLINT1Q14677 625 aa13.98□□□□□ -0.17
PTCHD3-202ENST00000622555 C19orf54Q5BKX5 351 aa13.98□□□□□ -0.17
PTCHD3-202ENST00000622555 SLC25A24Q6NUK1 477 aa13.98□□□□□ -0.17
PTCHD3-202ENST00000622555 STPG2Q8N412 459 aa13.98□□□□□ -0.17
PTCHD3-202ENST00000622555 UBAC2Q8NBM4 344 aa13.98□□□□□ -0.17
PTCHD3-202ENST00000622555 RNF141Q8WVD5 230 aa13.98□□□□□ -0.17
PTCHD3-202ENST00000622555 MISP3Q96FF7 219 aa13.98□□□□□ -0.17
PTCHD3-202ENST00000622555 SCAF4O95104 1147 aaKnown RBP13.98□□□□□ -0.17
PTCHD3-202ENST00000622555 ZP3P21754 424 aa13.98□□□□□ -0.17
PTCHD3-202ENST00000622555 RPL15P61313 204 aaKnown RBP13.98□□□□□ -0.17
PTCHD3-202ENST00000622555 CCDC28AQ8IWP9 274 aa13.98□□□□□ -0.17
PTCHD3-202ENST00000622555 Q8N2B8 174 aa13.98□□□□□ -0.17
PTCHD3-202ENST00000622555 LILRB2Q8N423 598 aa13.98□□□□□ -0.17
PTCHD3-202ENST00000622555 OR1L6Q8NGR2 347 aa13.98□□□□□ -0.17
PTCHD3-202ENST00000622555 TMED6Q8WW62 240 aa13.98□□□□□ -0.17
PTCHD3-202ENST00000622555 ZNF355PQ9NSJ1 428 aa13.98□□□□□ -0.17
PTCHD3-202ENST00000622555 DMRT1Q9Y5R6 373 aa13.98□□□□□ -0.17
PTCHD3-202ENST00000622555 CYB5BO43169 146 aa13.97□□□□□ -0.17
PTCHD3-202ENST00000622555 PVRIGQ6DKI7 326 aa13.97□□□□□ -0.17
PTCHD3-202ENST00000622555 EIF5AL1Q6IS14 154 aaKnown RBP13.97□□□□□ -0.17
PTCHD3-202ENST00000622555 Q6ZSV7 163 aa13.97□□□□□ -0.17
PTCHD3-202ENST00000622555 RNASEH2CQ8TDP1 164 aaKnown RBP13.97□□□□□ -0.17
PTCHD3-202ENST00000622555 TAF15Q92804 592 aaKnown RBP eCLIP13.97□□□□□ -0.17
PTCHD3-202ENST00000622555 PINX1Q96BK5 328 aaKnown RBP13.97□□□□□ -0.17
PTCHD3-202ENST00000622555 SAT2Q96F10 170 aaPredicted RBP13.97□□□□□ -0.17
PTCHD3-202ENST00000622555 WFDC1Q9HC57 220 aa13.97□□□□□ -0.17
PTCHD3-202ENST00000622555 ZNF580Q9UK33 172 aa13.97□□□□□ -0.17
PTCHD3-202ENST00000622555 KRBOX1C9JBD0 128 aa13.96□□□□□ -0.17
PTCHD3-202ENST00000622555 PRSS46E5RG02 174 aa13.96□□□□□ -0.17
PTCHD3-202ENST00000622555 OR2T6Q8NHC8 308 aa13.96□□□□□ -0.17
PTCHD3-202ENST00000622555 PLA2G2EQ9NZK7 142 aa13.96□□□□□ -0.17
PTCHD3-202ENST00000622555 CORTO00230 105 aa13.95□□□□□ -0.18
PTCHD3-202ENST00000622555 SOX15O60248 233 aa13.95□□□□□ -0.18
PTCHD3-202ENST00000622555 OPRK1P41145 380 aa13.95□□□□□ -0.18
PTCHD3-202ENST00000622555 LINC00052Q96N35 136 aa13.95□□□□□ -0.18
PTCHD3-202ENST00000622555 IGLV11-55A0A075B6I3 123 aa13.95□□□□□ -0.18
PTCHD3-202ENST00000622555 RAB19A4D1S5 217 aa13.95□□□□□ -0.18
PTCHD3-202ENST00000622555 SULT1A2P50226 295 aa13.95□□□□□ -0.18
PTCHD3-202ENST00000622555 MARC2Q969Z3 335 aa13.95□□□□□ -0.18
PTCHD3-202ENST00000622555 FANCD2OSQ96PS1 177 aa13.95□□□□□ -0.18
PTCHD3-202ENST00000622555 ATP5SQ99766 215 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms