RNA–Protein interactions for RNA: ENST00000622493.4

CLTCL1-212, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-212ENST00000622493 FAM74A1Q5RGS3 127 aa11.28□□□□□ -0.6
CLTCL1-212ENST00000622493 RPL7L1Q6DKI1 246 aaKnown RBP11.28□□□□□ -0.6
CLTCL1-212ENST00000622493 HAPLN4Q86UW8 402 aa11.28□□□□□ -0.6
CLTCL1-212ENST00000622493 TMEM219Q86XT9 240 aa11.28□□□□□ -0.6
CLTCL1-212ENST00000622493 BAP18Q8IXM2 172 aa11.28□□□□□ -0.6
CLTCL1-212ENST00000622493 LILRB2Q8N423 598 aa11.28□□□□□ -0.6
CLTCL1-212ENST00000622493 TMEM170AQ8WVE7 144 aa11.28□□□□□ -0.6
CLTCL1-212ENST00000622493 ARPC1AQ92747 370 aa11.28□□□□□ -0.6
CLTCL1-212ENST00000622493 GGACTQ9BVM4 153 aa11.28□□□□□ -0.6
CLTCL1-212ENST00000622493 SRP14P37108 136 aaKnown RBP11.27□□□□□ -0.61
CLTCL1-212ENST00000622493 SLC38A11Q08AI6 406 aa11.27□□□□□ -0.61
CLTCL1-212ENST00000622493 SSMEM1Q8WWF3 244 aa11.27□□□□□ -0.61
CLTCL1-212ENST00000622493 WFDC1Q9HC57 220 aa11.27□□□□□ -0.61
CLTCL1-212ENST00000622493 CARHSP1Q9Y2V2 147 aaKnown RBP11.27□□□□□ -0.61
CLTCL1-212ENST00000622493 PRSS46E5RG02 174 aa11.26□□□□□ -0.61
CLTCL1-212ENST00000622493 SNAPINO95295 136 aa11.26□□□□□ -0.61
CLTCL1-212ENST00000622493 FOSL1P15407 271 aa11.26□□□□□ -0.61
CLTCL1-212ENST00000622493 SCGB2A2Q13296 93 aa11.26□□□□□ -0.61
CLTCL1-212ENST00000622493 LY6EQ16553 131 aa11.26□□□□□ -0.61
CLTCL1-212ENST00000622493 OR1P1Q8NH06 330 aa11.26□□□□□ -0.61
CLTCL1-212ENST00000622493 RNASEH2CQ8TDP1 164 aaKnown RBP11.26□□□□□ -0.61
CLTCL1-212ENST00000622493 P2RX4Q99571 388 aa11.26□□□□□ -0.61
CLTCL1-212ENST00000622493 NAV3Q8IVL0 2385 aa11.26□□□□□ -0.61
CLTCL1-212ENST00000622493 IFNA5P01569 189 aa11.26□□□□□ -0.61
CLTCL1-212ENST00000622493 IGHV4-59P01825 116 aa11.26□□□□□ -0.61
CLTCL1-212ENST00000622493 AREGP15514 252 aa11.26□□□□□ -0.61
CLTCL1-212ENST00000622493 VWC2Q2TAL6 325 aa11.26□□□□□ -0.61
CLTCL1-212ENST00000622493 PVRIGQ6DKI7 326 aa11.26□□□□□ -0.61
CLTCL1-212ENST00000622493 EIF5AL1Q6IS14 154 aaKnown RBP11.26□□□□□ -0.61
CLTCL1-212ENST00000622493 OR1L6Q8NGR2 347 aa11.26□□□□□ -0.61
CLTCL1-212ENST00000622493 ABHD5Q8WTS1 349 aa11.26□□□□□ -0.61
CLTCL1-212ENST00000622493 RNF141Q8WVD5 230 aa11.26□□□□□ -0.61
CLTCL1-212ENST00000622493 TMEM68Q96MH6 324 aa11.26□□□□□ -0.61
CLTCL1-212ENST00000622493 ZNF48Q96MX3 618 aaPredicted RBP11.26□□□□□ -0.61
CLTCL1-212ENST00000622493 C12orf57Q99622 126 aa11.26□□□□□ -0.61
CLTCL1-212ENST00000622493 TMEM147Q9BVK8 224 aa11.26□□□□□ -0.61
CLTCL1-212ENST00000622493 PARD6GQ9BYG4 376 aaPredicted RBP11.26□□□□□ -0.61
CLTCL1-212ENST00000622493 ARV1Q9H2C2 271 aa11.26□□□□□ -0.61
CLTCL1-212ENST00000622493 FNDC10F2Z333 226 aa11.25□□□□□ -0.61
CLTCL1-212ENST00000622493 CORTO00230 105 aa11.25□□□□□ -0.61
CLTCL1-212ENST00000622493 AMY1AP04745 511 aa11.25□□□□□ -0.61
CLTCL1-212ENST00000622493 AKR1D1P51857 326 aa11.25□□□□□ -0.61
CLTCL1-212ENST00000622493 DLK1P80370 383 aa11.25□□□□□ -0.61
CLTCL1-212ENST00000622493 NDPQ00604 133 aa11.25□□□□□ -0.61
CLTCL1-212ENST00000622493 IL34Q6ZMJ4 242 aa11.25□□□□□ -0.61
CLTCL1-212ENST00000622493 SGMS2Q8NHU3 365 aa11.25□□□□□ -0.61
CLTCL1-212ENST00000622493 SEC11CQ9BY50 192 aa11.25□□□□□ -0.61
CLTCL1-212ENST00000622493 UQCC1Q9NVA1 299 aa11.25□□□□□ -0.61
CLTCL1-212ENST00000622493 F11RQ9Y624 299 aaKnown RBP11.25□□□□□ -0.61
CLTCL1-212ENST00000622493 NPIPB5A8MRT5 1133 aa11.24□□□□□ -0.61
CLTCL1-212ENST00000622493 F8W036 122 aa11.24□□□□□ -0.61
CLTCL1-212ENST00000622493 CRYGCP07315 174 aa11.24□□□□□ -0.61
CLTCL1-212ENST00000622493 RPL35P42766 123 aaKnown RBP11.24□□□□□ -0.61
CLTCL1-212ENST00000622493 BLOC1S1P78537 153 aa11.24□□□□□ -0.61
CLTCL1-212ENST00000622493 TTC9CQ8N5M4 171 aa11.24□□□□□ -0.61
CLTCL1-212ENST00000622493 CACNG8Q8WXS5 425 aa11.24□□□□□ -0.61
CLTCL1-212ENST00000622493 HSPB9Q9BQS6 159 aa11.24□□□□□ -0.61
CLTCL1-212ENST00000622493 GINS3Q9BRX5 216 aa11.24□□□□□ -0.61
CLTCL1-212ENST00000622493 FAM103A1Q9BTL3 118 aaKnown RBP11.24□□□□□ -0.61
CLTCL1-212ENST00000622493 VPREB3Q9UKI3 123 aa11.24□□□□□ -0.61
CLTCL1-212ENST00000622493 AKAP9Q99996 3911 aa11.24□□□□□ -0.61
CLTCL1-212ENST00000622493 REG1AP05451 166 aa11.23□□□□□ -0.61
CLTCL1-212ENST00000622493 EGR2P11161 476 aaPredicted RBP11.23□□□□□ -0.61
CLTCL1-212ENST00000622493 GPX4P36969 197 aaPredicted RBP11.23□□□□□ -0.61
CLTCL1-212ENST00000622493 SLC25A24Q6NUK1 477 aa11.23□□□□□ -0.61
CLTCL1-212ENST00000622493 IL17RELQ6ZVW7 336 aa11.23□□□□□ -0.61
CLTCL1-212ENST00000622493 TMEM86BQ8N661 226 aa11.23□□□□□ -0.61
CLTCL1-212ENST00000622493 SCGB1C1Q8TD33 95 aa11.23□□□□□ -0.61
CLTCL1-212ENST00000622493 GNPNAT1Q96EK6 184 aaPredicted RBP11.23□□□□□ -0.61
CLTCL1-212ENST00000622493 TMUB1Q9BVT8 246 aa11.23□□□□□ -0.61
CLTCL1-212ENST00000622493 CYB5BO43169 146 aa11.23□□□□□ -0.61
CLTCL1-212ENST00000622493 SEC11BP0C7V7 166 aa11.23□□□□□ -0.61
CLTCL1-212ENST00000622493 APELAP0DMC3 54 aa11.23□□□□□ -0.61
CLTCL1-212ENST00000622493 CD99P14209 185 aa11.23□□□□□ -0.61
CLTCL1-212ENST00000622493 CRIP2P52943 208 aaPredicted RBP11.23□□□□□ -0.61
CLTCL1-212ENST00000622493 CD69Q07108 199 aa11.23□□□□□ -0.61
CLTCL1-212ENST00000622493 AKIRIN2Q53H80 203 aa11.23□□□□□ -0.61
CLTCL1-212ENST00000622493 ETFRF1Q6IPR1 90 aa11.23□□□□□ -0.61
CLTCL1-212ENST00000622493 RBMS3Q6XE24 437 aaKnown RBP11.23□□□□□ -0.61
CLTCL1-212ENST00000622493 LFNGQ8NES3 379 aa11.23□□□□□ -0.61
CLTCL1-212ENST00000622493 WDR61Q9GZS3 305 aaKnown RBP11.23□□□□□ -0.61
CLTCL1-212ENST00000622493 WNT10AQ9GZT5 417 aa11.23□□□□□ -0.61
CLTCL1-212ENST00000622493 NPVFQ9HCQ7 196 aa11.23□□□□□ -0.61
CLTCL1-212ENST00000622493 ZMAT5Q9UDW3 170 aaKnown RBP11.23□□□□□ -0.61
CLTCL1-212ENST00000622493 FBXO7Q9Y3I1 522 aa11.23□□□□□ -0.61
CLTCL1-212ENST00000622493 ATP6V0E1O15342 81 aa11.22□□□□□ -0.61
CLTCL1-212ENST00000622493 HOXA3O43365 443 aaPredicted RBP11.22□□□□□ -0.61
CLTCL1-212ENST00000622493 FBXO24O75426 580 aa11.22□□□□□ -0.61
CLTCL1-212ENST00000622493 IGHG2P01859 326 aa11.22□□□□□ -0.61
CLTCL1-212ENST00000622493 DEFA4P12838 97 aa11.22□□□□□ -0.61
CLTCL1-212ENST00000622493 MEOX2P50222 304 aa11.22□□□□□ -0.61
CLTCL1-212ENST00000622493 GUCA2BQ16661 112 aa11.22□□□□□ -0.61
CLTCL1-212ENST00000622493 ASPHD1Q5U4P2 390 aa11.22□□□□□ -0.61
CLTCL1-212ENST00000622493 PARP11Q9NR21 331 aa11.22□□□□□ -0.61
CLTCL1-212ENST00000622493 ACANP16112 2415 aa11.22□□□□□ -0.61
CLTCL1-212ENST00000622493 TLN2Q9Y4G6 2542 aa11.22□□□□□ -0.61
CLTCL1-212ENST00000622493 UBE2L5PA0A1B0GUS4 154 aa11.21□□□□□ -0.61
CLTCL1-212ENST00000622493 MPDU1O75352 247 aa11.21□□□□□ -0.61
CLTCL1-212ENST00000622493 LY6G6DO95868 133 aa11.21□□□□□ -0.61
CLTCL1-212ENST00000622493 IGF1P05019 195 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms