RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 MED12Q93074 2177 aa6.57□□□□□ -1.36
VPS11-209ENST00000622309 LOC102723996A0A087X1L8 192 aa6.57□□□□□ -1.36
VPS11-209ENST00000622309 FAM90A26D6RGX4 464 aa6.57□□□□□ -1.36
VPS11-209ENST00000622309 IGKV1-5P01602 117 aa6.57□□□□□ -1.36
VPS11-209ENST00000622309 CAMPP49913 170 aa6.57□□□□□ -1.36
VPS11-209ENST00000622309 GNG3P63215 75 aa6.57□□□□□ -1.36
VPS11-209ENST00000622309 TMEM92Q6UXU6 159 aa6.57□□□□□ -1.36
VPS11-209ENST00000622309 Q6ZPA2 131 aa6.57□□□□□ -1.36
VPS11-209ENST00000622309 CABIN1Q9Y6J0 2220 aa6.57□□□□□ -1.36
VPS11-209ENST00000622309 RALGAPA1Q6GYQ0 2036 aa6.57□□□□□ -1.36
VPS11-209ENST00000622309 SRSF1Q07955 248 aaKnown RBP eCLIP6.57□□□□□ -1.36
VPS11-209ENST00000622309 FOXE3Q13461 319 aa6.57□□□□□ -1.36
VPS11-209ENST00000622309 VWC2Q2TAL6 325 aa6.57□□□□□ -1.36
VPS11-209ENST00000622309 RASL11AQ6T310 242 aa6.57□□□□□ -1.36
VPS11-209ENST00000622309 SH2D6Q7Z4S9 175 aa6.57□□□□□ -1.36
VPS11-209ENST00000622309 OOSP2Q86WS3 158 aa6.57□□□□□ -1.36
VPS11-209ENST00000622309 ELSPBP1Q96BH3 223 aa6.57□□□□□ -1.36
VPS11-209ENST00000622309 MUC22E2RYF6 1773 aaPredicted RBP6.56□□□□□ -1.36
VPS11-209ENST00000622309 SMIM27A0A1W2PRY6 76 aa6.56□□□□□ -1.36
VPS11-209ENST00000622309 CELA2BP08218 269 aaPredicted RBP6.56□□□□□ -1.36
VPS11-209ENST00000622309 OR5AL1P0C617 328 aa6.56□□□□□ -1.36
VPS11-209ENST00000622309 MFAP5Q13361 173 aa6.56□□□□□ -1.36
VPS11-209ENST00000622309 SLC25A53Q5H9E4 307 aa6.56□□□□□ -1.36
VPS11-209ENST00000622309 SPEM1Q8N4L4 309 aa6.56□□□□□ -1.36
VPS11-209ENST00000622309 OR1L3Q8NH93 324 aa6.56□□□□□ -1.36
VPS11-209ENST00000622309 H1FXQ92522 213 aaKnown RBP6.56□□□□□ -1.36
VPS11-209ENST00000622309 ADTRPQ96IZ2 230 aa6.56□□□□□ -1.36
VPS11-209ENST00000622309 SH2D2AQ9NP31 389 aa6.56□□□□□ -1.36
VPS11-209ENST00000622309 IGHV1-24A0A0C4DH33 117 aa6.56□□□□□ -1.36
VPS11-209ENST00000622309 A0A1W2PRE2 83 aa6.56□□□□□ -1.36
VPS11-209ENST00000622309 OR2J3O76001 311 aa6.56□□□□□ -1.36
VPS11-209ENST00000622309 IGKV1-39P01597 117 aa6.56□□□□□ -1.36
VPS11-209ENST00000622309 IGKV1D-39P04432 117 aa6.56□□□□□ -1.36
VPS11-209ENST00000622309 OR9G9P0C7N8 305 aa6.56□□□□□ -1.36
VPS11-209ENST00000622309 FCGR2BP31994 310 aaPredicted RBP6.56□□□□□ -1.36
VPS11-209ENST00000622309 RBM11P57052 281 aaKnown RBP6.56□□□□□ -1.36
VPS11-209ENST00000622309 GUSBP1Q15486 140 aa6.56□□□□□ -1.36
VPS11-209ENST00000622309 MBNL2Q5VZF2 373 aaKnown RBP6.56□□□□□ -1.36
VPS11-209ENST00000622309 HLA-DQA1Q5Y7H0 255 aa6.56□□□□□ -1.36
VPS11-209ENST00000622309 TMEM105Q8N8V8 129 aa6.56□□□□□ -1.36
VPS11-209ENST00000622309 CHCHD1Q96BP2 118 aaKnown RBP6.56□□□□□ -1.36
VPS11-209ENST00000622309 BMFQ96LC9 184 aa6.56□□□□□ -1.36
VPS11-209ENST00000622309 DEPPQ9NTK1 212 aa6.56□□□□□ -1.36
VPS11-209ENST00000622309 ZNF785A8K8V0 405 aa6.55□□□□□ -1.36
VPS11-209ENST00000622309 HSPB6O14558 160 aa6.55□□□□□ -1.36
VPS11-209ENST00000622309 NKX2-8O15522 239 aa6.55□□□□□ -1.36
VPS11-209ENST00000622309 CER1O95813 267 aa6.55□□□□□ -1.36
VPS11-209ENST00000622309 IGHV3-7P01780 117 aa6.55□□□□□ -1.36
VPS11-209ENST00000622309 GCHFRP30047 84 aa6.55□□□□□ -1.36
VPS11-209ENST00000622309 SRSF6Q13247 344 aaKnown RBP6.55□□□□□ -1.36
VPS11-209ENST00000622309 ZNF585BQ52M93 769 aa6.55□□□□□ -1.36
VPS11-209ENST00000622309 ACP7Q6ZNF0 438 aa6.55□□□□□ -1.36
VPS11-209ENST00000622309 TTC9CQ8N5M4 171 aa6.55□□□□□ -1.36
VPS11-209ENST00000622309 OR4X2Q8NGF9 303 aa6.55□□□□□ -1.36
VPS11-209ENST00000622309 ST8SIA1Q92185 356 aa6.55□□□□□ -1.36
VPS11-209ENST00000622309 ARPC1AQ92747 370 aa6.55□□□□□ -1.36
VPS11-209ENST00000622309 C11orf52Q96A22 123 aa6.55□□□□□ -1.36
VPS11-209ENST00000622309 GRAMD2BQ96HH9 432 aa6.55□□□□□ -1.36
VPS11-209ENST00000622309 GGTLC1Q9BX51 225 aa6.55□□□□□ -1.36
VPS11-209ENST00000622309 IL36RNQ9UBH0 155 aa6.55□□□□□ -1.36
VPS11-209ENST00000622309 ZFHX2Q9C0A1 2572 aaPredicted RBP6.55□□□□□ -1.36
VPS11-209ENST00000622309 RP1P56715 2156 aa6.55□□□□□ -1.36
VPS11-209ENST00000622309 IGKV1-27A0A075B6S5 117 aa6.55□□□□□ -1.36
VPS11-209ENST00000622309 IGKV1-12A0A0C4DH73 117 aa6.55□□□□□ -1.36
VPS11-209ENST00000622309 TEX50A0A1B0GTY4 177 aa6.55□□□□□ -1.36
VPS11-209ENST00000622309 IGKV1D-12P01611 117 aa6.55□□□□□ -1.36
VPS11-209ENST00000622309 GLRXP35754 106 aa6.55□□□□□ -1.36
VPS11-209ENST00000622309 TAS2R45P59539 299 aa6.55□□□□□ -1.36
VPS11-209ENST00000622309 RTL8BQ17RB0 113 aa6.55□□□□□ -1.36
VPS11-209ENST00000622309 RSPO4Q2I0M5 234 aaPredicted RBP6.55□□□□□ -1.36
VPS11-209ENST00000622309 ZNF718Q3SXZ3 478 aa6.55□□□□□ -1.36
VPS11-209ENST00000622309 FAM120AOSQ5T036 256 aa6.55□□□□□ -1.36
VPS11-209ENST00000622309 SLC35E4Q6ICL7 350 aa6.55□□□□□ -1.36
VPS11-209ENST00000622309 Q6ZS52 159 aa6.55□□□□□ -1.36
VPS11-209ENST00000622309 SSBP3Q9BWW4 388 aaPredicted RBP6.55□□□□□ -1.36
VPS11-209ENST00000622309 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.55□□□□□ -1.36
VPS11-209ENST00000622309 LIN7CQ9NUP9 197 aaKnown RBP6.55□□□□□ -1.36
VPS11-209ENST00000622309 WDFY3Q8IZQ1 3526 aa6.55□□□□□ -1.36
VPS11-209ENST00000622309 F5H768 121 aa6.55□□□□□ -1.36
VPS11-209ENST00000622309 WIPF1O43516 503 aa6.55□□□□□ -1.36
VPS11-209ENST00000622309 SYNGR1O43759 233 aa6.55□□□□□ -1.36
VPS11-209ENST00000622309 OR9G4Q8NGQ1 327 aa6.55□□□□□ -1.36
VPS11-209ENST00000622309 WIPF2Q8TF74 440 aaPredicted RBP6.55□□□□□ -1.36
VPS11-209ENST00000622309 LRRC29Q8WV35 223 aa6.55□□□□□ -1.36
VPS11-209ENST00000622309 MBD6Q96DN6 1003 aa6.55□□□□□ -1.36
VPS11-209ENST00000622309 NDFIP1Q9BT67 221 aa6.55□□□□□ -1.36
VPS11-209ENST00000622309 GCM1Q9NP62 436 aa6.55□□□□□ -1.36
VPS11-209ENST00000622309 ZNF391Q9UJN7 358 aa6.55□□□□□ -1.36
VPS11-209ENST00000622309 M0R135 149 aa6.54□□□□□ -1.36
VPS11-209ENST00000622309 RRHO14718 337 aa6.54□□□□□ -1.36
VPS11-209ENST00000622309 IGLV3-1P01715 115 aa6.54□□□□□ -1.36
VPS11-209ENST00000622309 FOXA3P55318 350 aaPredicted RBP6.54□□□□□ -1.36
VPS11-209ENST00000622309 FGFRL1Q8N441 504 aa6.54□□□□□ -1.36
VPS11-209ENST00000622309 GJC3Q8NFK1 279 aa6.54□□□□□ -1.36
VPS11-209ENST00000622309 OR13H1Q8NG92 308 aa6.54□□□□□ -1.36
VPS11-209ENST00000622309 IL1F10Q8WWZ1 152 aa6.54□□□□□ -1.36
VPS11-209ENST00000622309 ZNF799Q96GE5 643 aa6.54□□□□□ -1.36
VPS11-209ENST00000622309 CSDC2Q9Y534 153 aaKnown RBP6.54□□□□□ -1.36
VPS11-209ENST00000622309 VWC2LB2RUY7 222 aa6.54□□□□□ -1.36
VPS11-209ENST00000622309 TNFRSF4P43489 277 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms