RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 WNT2P09544 360 aa7.67□□□□□ -1.18
GGA3-223ENST00000621870 TDGF1P13385 188 aa7.67□□□□□ -1.18
GGA3-223ENST00000621870 CRISP2P16562 243 aa7.67□□□□□ -1.18
GGA3-223ENST00000621870 IGFBP2P18065 325 aa7.67□□□□□ -1.18
GGA3-223ENST00000621870 OTX1P32242 354 aaPredicted RBP7.67□□□□□ -1.18
GGA3-223ENST00000621870 RAB9AP51151 201 aa7.67□□□□□ -1.18
GGA3-223ENST00000621870 DEFA6Q01524 100 aa7.67□□□□□ -1.18
GGA3-223ENST00000621870 LYPD2Q6UXB3 125 aa7.67□□□□□ -1.18
GGA3-223ENST00000621870 TMEM116Q8NCL8 245 aa7.67□□□□□ -1.18
GGA3-223ENST00000621870 RTBDNQ9BSG5 229 aaPredicted RBP7.67□□□□□ -1.18
GGA3-223ENST00000621870 SEC11CQ9BY50 192 aa7.67□□□□□ -1.18
GGA3-223ENST00000621870 IGHV2-26A0A0B4J1V2 119 aa7.66□□□□□ -1.18
GGA3-223ENST00000621870 FAM181BA6NEQ2 426 aa7.66□□□□□ -1.18
GGA3-223ENST00000621870 FOXI3A8MTJ6 420 aaPredicted RBP7.66□□□□□ -1.18
GGA3-223ENST00000621870 SNURFLB1AK76 121 aa7.66□□□□□ -1.18
GGA3-223ENST00000621870 M0QZK8 103 aa7.66□□□□□ -1.18
GGA3-223ENST00000621870 IGHV1-8P0DP01 117 aa7.66□□□□□ -1.18
GGA3-223ENST00000621870 CEACAM8P31997 349 aaPredicted RBP7.66□□□□□ -1.18
GGA3-223ENST00000621870 DUTP33316 252 aaKnown RBP7.66□□□□□ -1.18
GGA3-223ENST00000621870 VDAC2P45880 294 aaPredicted RBP7.66□□□□□ -1.18
GGA3-223ENST00000621870 ATP5IP56385 69 aaPredicted RBP7.66□□□□□ -1.18
GGA3-223ENST00000621870 RHOGP84095 191 aa7.66□□□□□ -1.18
GGA3-223ENST00000621870 ZNF660Q6AZW8 331 aaPredicted RBP7.66□□□□□ -1.18
GGA3-223ENST00000621870 SPSB4Q96A44 273 aa7.66□□□□□ -1.18
GGA3-223ENST00000621870 DCAF16Q9NXF7 216 aa7.66□□□□□ -1.18
GGA3-223ENST00000621870 YTHDF2Q9Y5A9 579 aaKnown RBP7.66□□□□□ -1.18
GGA3-223ENST00000621870 TMEM189A5PLL7 270 aa7.66□□□□□ -1.18
GGA3-223ENST00000621870 ZNF98A6NK75 572 aa7.66□□□□□ -1.18
GGA3-223ENST00000621870 NBEAP1P0C6P0 100 aa7.66□□□□□ -1.18
GGA3-223ENST00000621870 ZP1P60852 638 aa7.66□□□□□ -1.18
GGA3-223ENST00000621870 WDR73Q6P4I2 378 aa7.66□□□□□ -1.18
GGA3-223ENST00000621870 Q71RC1 249 aaPredicted RBP7.66□□□□□ -1.18
GGA3-223ENST00000621870 CBLN2Q8IUK8 224 aa7.66□□□□□ -1.18
GGA3-223ENST00000621870 KIAA1671Q9BY89 1806 aa7.66□□□□□ -1.18
GGA3-223ENST00000621870 SIAH2O43255 324 aa7.66□□□□□ -1.18
GGA3-223ENST00000621870 CYP2G1PQ6ZSU1 146 aa7.66□□□□□ -1.18
GGA3-223ENST00000621870 VMO1Q7Z5L0 202 aa7.66□□□□□ -1.18
GGA3-223ENST00000621870 SZT2Q5T011 3432 aa7.65□□□□□ -1.18
GGA3-223ENST00000621870 UPK2O00526 184 aa7.65□□□□□ -1.18
GGA3-223ENST00000621870 MDKP21741 143 aaPredicted RBP7.65□□□□□ -1.18
GGA3-223ENST00000621870 MAS1LP35410 378 aa7.65□□□□□ -1.18
GGA3-223ENST00000621870 RND3P61587 244 aa7.65□□□□□ -1.18
GGA3-223ENST00000621870 CLDND2Q8NHS1 167 aa7.65□□□□□ -1.18
GGA3-223ENST00000621870 GFI1Q99684 422 aa7.65□□□□□ -1.18
GGA3-223ENST00000621870 PHLDA3Q9Y5J5 127 aa7.65□□□□□ -1.18
GGA3-223ENST00000621870 PKD1L2Q7Z442 2459 aa7.65□□□□□ -1.18
GGA3-223ENST00000621870 A6NNC1 897 aa7.65□□□□□ -1.18
GGA3-223ENST00000621870 NSUN5P1Q3KNT7 163 aa7.65□□□□□ -1.18
GGA3-223ENST00000621870 Q5PR19 223 aa7.65□□□□□ -1.18
GGA3-223ENST00000621870 SELENOKQ9Y6D0 94 aa7.65□□□□□ -1.18
GGA3-223ENST00000621870 NUTF2P61970 127 aaKnown RBP7.65□□□□□ -1.19
GGA3-223ENST00000621870 CX3CL1P78423 397 aa7.65□□□□□ -1.19
GGA3-223ENST00000621870 COTL1Q14019 142 aa7.65□□□□□ -1.19
GGA3-223ENST00000621870 C2orf68Q2NKX9 166 aa7.65□□□□□ -1.19
GGA3-223ENST00000621870 FAM74A3Q4VXF1 159 aa7.65□□□□□ -1.19
GGA3-223ENST00000621870 FAM74A4Q5TZK3 123 aa7.65□□□□□ -1.19
GGA3-223ENST00000621870 ZNF329Q86UD4 541 aa7.65□□□□□ -1.19
GGA3-223ENST00000621870 TSC2P49815 1807 aa7.64□□□□□ -1.19
GGA3-223ENST00000621870 IL6RP08887 468 aaPredicted RBP7.64□□□□□ -1.19
GGA3-223ENST00000621870 PTTG1IPP53801 180 aa7.64□□□□□ -1.19
GGA3-223ENST00000621870 NHLRC3Q5JS37 347 aa7.64□□□□□ -1.19
GGA3-223ENST00000621870 VCANP13611 3396 aa7.64□□□□□ -1.19
GGA3-223ENST00000621870 IGKV1D-17A0A075B6S4 117 aa7.64□□□□□ -1.19
GGA3-223ENST00000621870 GRNP28799 593 aaKnown RBP7.64□□□□□ -1.19
GGA3-223ENST00000621870 TSPOP30536 169 aa7.64□□□□□ -1.19
GGA3-223ENST00000621870 TMEM177Q53S58 311 aa7.64□□□□□ -1.19
GGA3-223ENST00000621870 IBA57Q5T440 356 aaKnown RBP7.64□□□□□ -1.19
GGA3-223ENST00000621870 TOMM20LQ6UXN7 152 aa7.64□□□□□ -1.19
GGA3-223ENST00000621870 TCRBV4S1A1TA0A5B7 111 aa7.64□□□□□ -1.19
GGA3-223ENST00000621870 C9JCJ5 164 aa7.64□□□□□ -1.19
GGA3-223ENST00000621870 SLC25A16P16260 332 aa7.64□□□□□ -1.19
GGA3-223ENST00000621870 NTF4P34130 210 aa7.64□□□□□ -1.19
GGA3-223ENST00000621870 TWIST1Q15672 202 aa7.64□□□□□ -1.19
GGA3-223ENST00000621870 KLF17Q5JT82 389 aaPredicted RBP7.64□□□□□ -1.19
GGA3-223ENST00000621870 KIR3DL3Q8N743 410 aa7.64□□□□□ -1.19
GGA3-223ENST00000621870 ANAPC16Q96DE5 110 aa7.64□□□□□ -1.19
GGA3-223ENST00000621870 RSPO3Q9BXY4 272 aaPredicted RBP7.64□□□□□ -1.19
GGA3-223ENST00000621870 ZNF581Q9P0T4 197 aa7.64□□□□□ -1.19
GGA3-223ENST00000621870 FUT9Q9Y231 359 aa7.64□□□□□ -1.19
GGA3-223ENST00000621870 OR9G9P0C7N8 305 aa7.63□□□□□ -1.19
GGA3-223ENST00000621870 SRD5A1P18405 259 aa7.63□□□□□ -1.19
GGA3-223ENST00000621870 EMP1P54849 157 aa7.63□□□□□ -1.19
GGA3-223ENST00000621870 OR10W1Q8NGF6 305 aa7.63□□□□□ -1.19
GGA3-223ENST00000621870 FAM74A7A6NL05 159 aa7.63□□□□□ -1.19
GGA3-223ENST00000621870 ETV2O00321 342 aaPredicted RBP7.63□□□□□ -1.19
GGA3-223ENST00000621870 ISLRO14498 428 aa7.63□□□□□ -1.19
GGA3-223ENST00000621870 NDUFS7O75251 213 aa7.63□□□□□ -1.19
GGA3-223ENST00000621870 CD55P08174 381 aa7.63□□□□□ -1.19
GGA3-223ENST00000621870 TFF3Q07654 80 aa7.63□□□□□ -1.19
GGA3-223ENST00000621870 FAM159AQ6UWV7 190 aa7.63□□□□□ -1.19
GGA3-223ENST00000621870 LINC00518Q8N0U6 118 aa7.63□□□□□ -1.19
GGA3-223ENST00000621870 OR10D4PQ8NGN7 298 aa7.63□□□□□ -1.19
GGA3-223ENST00000621870 TNFRSF14Q92956 283 aa7.63□□□□□ -1.19
GGA3-223ENST00000621870 TXNDC17Q9BRA2 123 aa7.63□□□□□ -1.19
GGA3-223ENST00000621870 PLXND1Q9Y4D7 1925 aa7.63□□□□□ -1.19
GGA3-223ENST00000621870 LOC389332A0A1B0GUA5 103 aa7.63□□□□□ -1.19
GGA3-223ENST00000621870 HTN3P15516 51 aa7.63□□□□□ -1.19
GGA3-223ENST00000621870 MEOX2P50222 304 aa7.63□□□□□ -1.19
GGA3-223ENST00000621870 PMS2P11Q13670 270 aa7.63□□□□□ -1.19
GGA3-223ENST00000621870 TMEM42Q69YG0 159 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms