RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 IFNA17P01571 189 aa13.64□□□□□ -0.23
SCAMP4-213ENST00000621748 IGKV1-39P01597 117 aa13.64□□□□□ -0.23
SCAMP4-213ENST00000621748 IGKV1D-39P04432 117 aa13.64□□□□□ -0.23
SCAMP4-213ENST00000621748 SULT1A3P0DMM9 295 aa13.64□□□□□ -0.23
SCAMP4-213ENST00000621748 SULT1A4P0DMN0 295 aa13.64□□□□□ -0.23
SCAMP4-213ENST00000621748 ANKRD55Q3KP44 614 aa13.64□□□□□ -0.23
SCAMP4-213ENST00000621748 ADAMTSL5Q6ZMM2 481 aa13.64□□□□□ -0.23
SCAMP4-213ENST00000621748 LYZL2Q7Z4W2 148 aa13.64□□□□□ -0.23
SCAMP4-213ENST00000621748 OR52B4Q8NGK2 314 aa13.64□□□□□ -0.23
SCAMP4-213ENST00000621748 CCDC140Q96MF4 163 aa13.64□□□□□ -0.23
SCAMP4-213ENST00000621748 ENY2Q9NPA8 101 aa13.64□□□□□ -0.23
SCAMP4-213ENST00000621748 IGLV11-55A0A075B6I3 123 aa13.63□□□□□ -0.23
SCAMP4-213ENST00000621748 IZUMO1RA6ND01 250 aa13.63□□□□□ -0.23
SCAMP4-213ENST00000621748 OR2C1O95371 312 aa13.63□□□□□ -0.23
SCAMP4-213ENST00000621748 IGKV1-5P01602 117 aa13.63□□□□□ -0.23
SCAMP4-213ENST00000621748 FGF2P09038 288 aa13.63□□□□□ -0.23
SCAMP4-213ENST00000621748 DEFA4P12838 97 aa13.63□□□□□ -0.23
SCAMP4-213ENST00000621748 CLEC19AQ6UXS0 136 aa13.63□□□□□ -0.23
SCAMP4-213ENST00000621748 OR10W1Q8NGF6 305 aa13.63□□□□□ -0.23
SCAMP4-213ENST00000621748 OR1L8Q8NGR8 309 aa13.63□□□□□ -0.23
SCAMP4-213ENST00000621748 OR1S1Q8NH92 325 aa13.63□□□□□ -0.23
SCAMP4-213ENST00000621748 PEMTQ9UBM1 199 aa13.63□□□□□ -0.23
SCAMP4-213ENST00000621748 TEX50A0A1B0GTY4 177 aa13.62□□□□□ -0.23
SCAMP4-213ENST00000621748 A0A1B0GU03 582 aa13.62□□□□□ -0.23
SCAMP4-213ENST00000621748 C5orf51A6NDU8 294 aa13.62□□□□□ -0.23
SCAMP4-213ENST00000621748 FAM25EA8MYX2 175 aa13.62□□□□□ -0.23
SCAMP4-213ENST00000621748 CYB5BO43169 146 aa13.62□□□□□ -0.23
SCAMP4-213ENST00000621748 GGCTO75223 188 aaKnown RBP13.62□□□□□ -0.23
SCAMP4-213ENST00000621748 TRAPPC2P0DI81 140 aa13.62□□□□□ -0.23
SCAMP4-213ENST00000621748 TRAPPC2BP0DI82 140 aa13.62□□□□□ -0.23
SCAMP4-213ENST00000621748 HIST1H1BP16401 226 aaKnown RBP13.62□□□□□ -0.23
SCAMP4-213ENST00000621748 SMCO1Q147U7 214 aa13.62□□□□□ -0.23
SCAMP4-213ENST00000621748 FAM209BQ5JX69 171 aa13.62□□□□□ -0.23
SCAMP4-213ENST00000621748 OR5B3Q8NH48 314 aa13.62□□□□□ -0.23
SCAMP4-213ENST00000621748 LHFPL5Q8TAF8 219 aa13.62□□□□□ -0.23
SCAMP4-213ENST00000621748 QTRT1Q9BXR0 403 aaKnown RBP13.62□□□□□ -0.23
SCAMP4-213ENST00000621748 CACNG5Q9UF02 275 aa13.62□□□□□ -0.23
SCAMP4-213ENST00000621748 NSG2Q9Y328 171 aa13.62□□□□□ -0.23
SCAMP4-213ENST00000621748 C15orf61A6NNL5 157 aa13.61□□□□□ -0.23
SCAMP4-213ENST00000621748 IGHV4-30-4P0DP06 118 aa13.61□□□□□ -0.23
SCAMP4-213ENST00000621748 EDN2P20800 178 aa13.61□□□□□ -0.23
SCAMP4-213ENST00000621748 HSD17B13Q7Z5P4 300 aaPredicted RBP13.61□□□□□ -0.23
SCAMP4-213ENST00000621748 EEF1AKMT3Q96AZ1 226 aa13.61□□□□□ -0.23
SCAMP4-213ENST00000621748 GPR146Q96CH1 333 aa13.61□□□□□ -0.23
SCAMP4-213ENST00000621748 SRSF8Q9BRL6 282 aaKnown RBP13.61□□□□□ -0.23
SCAMP4-213ENST00000621748 DNAH7Q8WXX0 4024 aa13.61□□□□□ -0.23
SCAMP4-213ENST00000621748 MFSD2BA6NFX1 497 aa13.6□□□□□ -0.23
SCAMP4-213ENST00000621748 ARL3P36405 182 aa13.6□□□□□ -0.23
SCAMP4-213ENST00000621748 HSPE1P61604 102 aaKnown RBP13.6□□□□□ -0.23
SCAMP4-213ENST00000621748 WT1-ASQ06250 92 aa13.6□□□□□ -0.23
SCAMP4-213ENST00000621748 OXA1LQ15070 435 aa13.6□□□□□ -0.23
SCAMP4-213ENST00000621748 GGNBP1Q5YKI7 109 aa13.6□□□□□ -0.23
SCAMP4-213ENST00000621748 GSG1LQ6UXU4 331 aa13.6□□□□□ -0.23
SCAMP4-213ENST00000621748 C19orf73Q9NVV2 129 aa13.6□□□□□ -0.23
SCAMP4-213ENST00000621748 C2orf70A6NJV1 201 aa13.59□□□□□ -0.23
SCAMP4-213ENST00000621748 CEBPZOSA8MTT3 80 aa13.59□□□□□ -0.23
SCAMP4-213ENST00000621748 WRBO00258 174 aa13.59□□□□□ -0.23
SCAMP4-213ENST00000621748 MED6O75586 246 aa13.59□□□□□ -0.23
SCAMP4-213ENST00000621748 CLEC3BP05452 202 aa13.59□□□□□ -0.23
SCAMP4-213ENST00000621748 OR13C7P0DN81 318 aa13.59□□□□□ -0.23
SCAMP4-213ENST00000621748 SLC25A6P12236 298 aa13.59□□□□□ -0.23
SCAMP4-213ENST00000621748 ERHP84090 104 aaKnown RBP13.59□□□□□ -0.23
SCAMP4-213ENST00000621748 CD300EQ496F6 205 aaPredicted RBP13.59□□□□□ -0.23
SCAMP4-213ENST00000621748 LCN12Q6JVE5 192 aa13.59□□□□□ -0.23
SCAMP4-213ENST00000621748 GPHB5Q86YW7 130 aa13.59□□□□□ -0.23
SCAMP4-213ENST00000621748 CXorf58Q96LI9 332 aa13.59□□□□□ -0.23
SCAMP4-213ENST00000621748 PLEKHA3Q9HB20 300 aa13.59□□□□□ -0.23
SCAMP4-213ENST00000621748 NDUFA4L2Q9NRX3 87 aa13.59□□□□□ -0.23
SCAMP4-213ENST00000621748 TMEM14BQ9NUH8 114 aa13.59□□□□□ -0.23
SCAMP4-213ENST00000621748 GSKIPQ9P0R6 139 aa13.59□□□□□ -0.23
SCAMP4-213ENST00000621748 TRBV7-1A0A0A6YYK4 115 aa13.58□□□□□ -0.24
SCAMP4-213ENST00000621748 DBX1A6NMT0 343 aa13.58□□□□□ -0.24
SCAMP4-213ENST00000621748 A8MZ25 164 aa13.58□□□□□ -0.24
SCAMP4-213ENST00000621748 LGALS9O00182 355 aa13.58□□□□□ -0.24
SCAMP4-213ENST00000621748 ADAP1O75689 374 aa13.58□□□□□ -0.24
SCAMP4-213ENST00000621748 HOXA1P49639 335 aaPredicted RBP13.58□□□□□ -0.24
SCAMP4-213ENST00000621748 SPCS3P61009 180 aa13.58□□□□□ -0.24
SCAMP4-213ENST00000621748 IZUMO4Q1ZYL8 232 aa13.58□□□□□ -0.24
SCAMP4-213ENST00000621748 IAH1Q2TAA2 248 aaPredicted RBP13.58□□□□□ -0.24
SCAMP4-213ENST00000621748 NMSQ5H8A3 153 aa13.58□□□□□ -0.24
SCAMP4-213ENST00000621748 MED28Q9H204 178 aa13.58□□□□□ -0.24
SCAMP4-213ENST00000621748 HIPK2Q9H2X6 1198 aa13.58□□□□□ -0.24
SCAMP4-213ENST00000621748 ZC4H2Q9NQZ6 224 aa13.58□□□□□ -0.24
SCAMP4-213ENST00000621748 ALG5Q9Y673 324 aa13.58□□□□□ -0.24
SCAMP4-213ENST00000621748 NBEAL2Q6ZNJ1 2754 aa13.58□□□□□ -0.24
SCAMP4-213ENST00000621748 A0A0B4J293 547 aa13.57□□□□□ -0.24
SCAMP4-213ENST00000621748 GOSR2O14653 212 aa13.57□□□□□ -0.24
SCAMP4-213ENST00000621748 ST8SIA3O43173 380 aa13.57□□□□□ -0.24
SCAMP4-213ENST00000621748 FOLR2P14207 255 aa13.57□□□□□ -0.24
SCAMP4-213ENST00000621748 SNCAP37840 140 aa13.57□□□□□ -0.24
SCAMP4-213ENST00000621748 SUB1P53999 127 aaKnown RBP eCLIP13.57□□□□□ -0.24
SCAMP4-213ENST00000621748 MFAP2P55001 183 aa13.57□□□□□ -0.24
SCAMP4-213ENST00000621748 DEFB114Q30KQ6 69 aa13.57□□□□□ -0.24
SCAMP4-213ENST00000621748 OR2K2Q8NGT1 345 aa13.57□□□□□ -0.24
SCAMP4-213ENST00000621748 ZNF502Q8TBZ5 544 aa13.57□□□□□ -0.24
SCAMP4-213ENST00000621748 RCHY1Q96PM5 261 aa13.57□□□□□ -0.24
SCAMP4-213ENST00000621748 A0A0G2JRQ6 117 aa13.56□□□□□ -0.24
SCAMP4-213ENST00000621748 ZNF785A8K8V0 405 aa13.56□□□□□ -0.24
SCAMP4-213ENST00000621748 P0C879 139 aa13.56□□□□□ -0.24
SCAMP4-213ENST00000621748 CBLN1P23435 193 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms