RNA–Protein interactions for RNA: ENST00000621534.4

PSMD13-215, Transcript of proteasome 26S subunit, non-ATPase 13, human

TSL 5 BASIC

Gene PSMD13, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD13-215	ENST00000621534	C16orf82	Q7Z2V1	217 aa		11.92	□□□□□ -0.5
PSMD13-215	ENST00000621534	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	11.92	□□□□□ -0.5
PSMD13-215	ENST00000621534	BAP18	Q8IXM2	172 aa		11.92	□□□□□ -0.5
PSMD13-215	ENST00000621534	MRPL41	Q8IXM3	137 aa	Known RBP	11.92	□□□□□ -0.5
PSMD13-215	ENST00000621534	UBAC2	Q8NBM4	344 aa		11.92	□□□□□ -0.5
PSMD13-215	ENST00000621534	ZNF680	Q8NEM1	530 aa		11.92	□□□□□ -0.5
PSMD13-215	ENST00000621534	PINX1	Q96BK5	328 aa	Known RBP	11.92	□□□□□ -0.5
PSMD13-215	ENST00000621534	ARV1	Q9H2C2	271 aa		11.92	□□□□□ -0.5
PSMD13-215	ENST00000621534	BORCS7-ASMT	A0A0B4J1R7	106 aa		11.91	□□□□□ -0.5
PSMD13-215	ENST00000621534	BTBD17	A6NE02	478 aa		11.91	□□□□□ -0.5
PSMD13-215	ENST00000621534	RGS13	O14921	159 aa		11.91	□□□□□ -0.5
PSMD13-215	ENST00000621534	FBXO24	O75426	580 aa		11.91	□□□□□ -0.5
PSMD13-215	ENST00000621534	DFFB	O76075	338 aa		11.91	□□□□□ -0.5
PSMD13-215	ENST00000621534	JTB	O76095	146 aa		11.91	□□□□□ -0.5
PSMD13-215	ENST00000621534	CTRB1	P17538	263 aa		11.91	□□□□□ -0.5
PSMD13-215	ENST00000621534	ATP5I	P56385	69 aa	Predicted RBP	11.91	□□□□□ -0.5
PSMD13-215	ENST00000621534	BLCAP	P62952	87 aa		11.91	□□□□□ -0.5
PSMD13-215	ENST00000621534	ZNF266	Q14584	549 aa		11.91	□□□□□ -0.5
PSMD13-215	ENST00000621534	VWC2	Q2TAL6	325 aa		11.91	□□□□□ -0.5
PSMD13-215	ENST00000621534	CTRB2	Q6GPI1	263 aa		11.91	□□□□□ -0.5
PSMD13-215	ENST00000621534		Q6ZS46	218 aa		11.91	□□□□□ -0.5
PSMD13-215	ENST00000621534	HSD17B11	Q8NBQ5	300 aa		11.91	□□□□□ -0.5
PSMD13-215	ENST00000621534	LFNG	Q8NES3	379 aa		11.91	□□□□□ -0.5
PSMD13-215	ENST00000621534	TMEM147	Q9BVK8	224 aa		11.91	□□□□□ -0.5
PSMD13-215	ENST00000621534	F11R	Q9Y624	299 aa	Known RBP	11.91	□□□□□ -0.5
PSMD13-215	ENST00000621534	RFNG	Q9Y644	331 aa		11.91	□□□□□ -0.5
PSMD13-215	ENST00000621534		M0QZK8	103 aa		11.9	□□□□□ -0.5
PSMD13-215	ENST00000621534	DLK1	P80370	383 aa		11.9	□□□□□ -0.5
PSMD13-215	ENST00000621534	RUNX1	Q01196	453 aa		11.9	□□□□□ -0.5
PSMD13-215	ENST00000621534	MLANA	Q16655	118 aa		11.9	□□□□□ -0.5
PSMD13-215	ENST00000621534	ARSJ	Q5FYB0	599 aa	Predicted RBP	11.9	□□□□□ -0.5
PSMD13-215	ENST00000621534	C9orf152	Q5JTZ5	239 aa		11.9	□□□□□ -0.5
PSMD13-215	ENST00000621534	SGMS2	Q8NHU3	365 aa		11.9	□□□□□ -0.5
PSMD13-215	ENST00000621534	DUX5	Q96PT3	197 aa		11.9	□□□□□ -0.5
PSMD13-215	ENST00000621534	GINS3	Q9BRX5	216 aa		11.9	□□□□□ -0.5
PSMD13-215	ENST00000621534	SH3BGRL3	Q9H299	93 aa		11.9	□□□□□ -0.5
PSMD13-215	ENST00000621534	UQCC1	Q9NVA1	299 aa		11.9	□□□□□ -0.5
PSMD13-215	ENST00000621534	SCAF4	O95104	1147 aa	Known RBP	11.89	□□□□□ -0.51
PSMD13-215	ENST00000621534	PRH1	P02810	166 aa		11.89	□□□□□ -0.51
PSMD13-215	ENST00000621534	SUB1	P53999	127 aa	Known RBP eCLIP	11.89	□□□□□ -0.51	2e-7	■■■■□ 25.4
PSMD13-215	ENST00000621534	ATP6V1F	Q16864	119 aa		11.89	□□□□□ -0.51
PSMD13-215	ENST00000621534	ECSCR	Q19T08	205 aa		11.89	□□□□□ -0.51
PSMD13-215	ENST00000621534	OR1P1	Q8NH06	330 aa		11.89	□□□□□ -0.51
PSMD13-215	ENST00000621534	TMED6	Q8WW62	240 aa		11.89	□□□□□ -0.51
PSMD13-215	ENST00000621534	WNT10A	Q9GZT5	417 aa		11.89	□□□□□ -0.51
PSMD13-215	ENST00000621534	FNDC4	Q9H6D8	234 aa	Predicted RBP	11.89	□□□□□ -0.51
PSMD13-215	ENST00000621534	NPIPB5	A8MRT5	1133 aa		11.88	□□□□□ -0.51
PSMD13-215	ENST00000621534		G3V318	75 aa		11.88	□□□□□ -0.51
PSMD13-215	ENST00000621534	CRYGC	P07315	174 aa		11.88	□□□□□ -0.51
PSMD13-215	ENST00000621534	FAM74A1	Q5RGS3	127 aa		11.88	□□□□□ -0.51
PSMD13-215	ENST00000621534	TTC9C	Q8N5M4	171 aa		11.88	□□□□□ -0.51
PSMD13-215	ENST00000621534	MISP3	Q96FF7	219 aa		11.88	□□□□□ -0.51
PSMD13-215	ENST00000621534	GGACT	Q9BVM4	153 aa		11.88	□□□□□ -0.51
PSMD13-215	ENST00000621534	WDR61	Q9GZS3	305 aa	Known RBP	11.88	□□□□□ -0.51
PSMD13-215	ENST00000621534	PLA2G2E	Q9NZK7	142 aa		11.88	□□□□□ -0.51
PSMD13-215	ENST00000621534	SMCO3	A2RU48	225 aa		11.88	□□□□□ -0.51
PSMD13-215	ENST00000621534	IFNA7	P01567	189 aa		11.88	□□□□□ -0.51
PSMD13-215	ENST00000621534	IFNA5	P01569	189 aa		11.88	□□□□□ -0.51
PSMD13-215	ENST00000621534	IGHV3-48	P01763	117 aa		11.88	□□□□□ -0.51
PSMD13-215	ENST00000621534	IGHG2	P01859	326 aa		11.88	□□□□□ -0.51
PSMD13-215	ENST00000621534	MDK	P21741	143 aa	Predicted RBP	11.88	□□□□□ -0.51
PSMD13-215	ENST00000621534	ATP6V0C	P27449	155 aa		11.88	□□□□□ -0.51
PSMD13-215	ENST00000621534	EIF5A	P63241	154 aa	Known RBP	11.88	□□□□□ -0.51
PSMD13-215	ENST00000621534	CD69	Q07108	199 aa		11.88	□□□□□ -0.51
PSMD13-215	ENST00000621534	C19orf54	Q5BKX5	351 aa		11.88	□□□□□ -0.51
PSMD13-215	ENST00000621534	SLC25A24	Q6NUK1	477 aa		11.88	□□□□□ -0.51
PSMD13-215	ENST00000621534	UNQ5815/PRO19632	Q6UWF5	114 aa		11.88	□□□□□ -0.51
PSMD13-215	ENST00000621534	ZNF767P	Q75MW2	155 aa		11.88	□□□□□ -0.51
PSMD13-215	ENST00000621534	SLC16A13	Q7RTY0	426 aa		11.88	□□□□□ -0.51
PSMD13-215	ENST00000621534	OR5T1	Q8NG75	326 aa		11.88	□□□□□ -0.51
PSMD13-215	ENST00000621534	RNASEH2C	Q8TDP1	164 aa	Known RBP	11.88	□□□□□ -0.51
PSMD13-215	ENST00000621534	PHYHIPL	Q96FC7	376 aa		11.88	□□□□□ -0.51
PSMD13-215	ENST00000621534	PARD6G	Q9BYG4	376 aa	Predicted RBP	11.88	□□□□□ -0.51
PSMD13-215	ENST00000621534	MRPL36	Q9P0J6	103 aa	Known RBP	11.88	□□□□□ -0.51
PSMD13-215	ENST00000621534	LINC00527	Q9UJ94	153 aa		11.88	□□□□□ -0.51
PSMD13-215	ENST00000621534	FGF7	P21781	194 aa		11.87	□□□□□ -0.51
PSMD13-215	ENST00000621534	OPRK1	P41145	380 aa		11.87	□□□□□ -0.51
PSMD13-215	ENST00000621534	CRIP2	P52943	208 aa	Predicted RBP	11.87	□□□□□ -0.51
PSMD13-215	ENST00000621534	TREML4	Q6UXN2	200 aa		11.87	□□□□□ -0.51
PSMD13-215	ENST00000621534	SLC35E3	Q7Z769	313 aa		11.87	□□□□□ -0.51
PSMD13-215	ENST00000621534	FAM110D	Q8TAY7	271 aa	Predicted RBP	11.87	□□□□□ -0.51
PSMD13-215	ENST00000621534	SCARB1	Q8WTV0	552 aa		11.87	□□□□□ -0.51
PSMD13-215	ENST00000621534	TAF15	Q92804	592 aa	Known RBP eCLIP	11.87	□□□□□ -0.51
PSMD13-215	ENST00000621534	RSG1	Q9BU20	258 aa		11.87	□□□□□ -0.51
PSMD13-215	ENST00000621534	SLC25A32	Q9H2D1	315 aa		11.87	□□□□□ -0.51
PSMD13-215	ENST00000621534	UBQLN2	Q9UHD9	624 aa		11.87	□□□□□ -0.51
PSMD13-215	ENST00000621534	WDR83OS	Q9Y284	106 aa		11.87	□□□□□ -0.51
PSMD13-215	ENST00000621534	IGHV3-21	A0A0B4J1V1	117 aa		11.86	□□□□□ -0.51
PSMD13-215	ENST00000621534	DNAJC9-AS1	A6NH13	148 aa		11.86	□□□□□ -0.51
PSMD13-215	ENST00000621534	SPP1	P10451	314 aa		11.86	□□□□□ -0.51
PSMD13-215	ENST00000621534	DEFA4	P12838	97 aa		11.86	□□□□□ -0.51
PSMD13-215	ENST00000621534	GAMT	Q14353	236 aa		11.86	□□□□□ -0.51
PSMD13-215	ENST00000621534	TMEM95	Q3KNT9	176 aa		11.86	□□□□□ -0.51
PSMD13-215	ENST00000621534	OR2T6	Q8NHC8	308 aa		11.86	□□□□□ -0.51
PSMD13-215	ENST00000621534	SCGB1C1	Q8TD33	95 aa		11.86	□□□□□ -0.51
PSMD13-215	ENST00000621534	PCNP	Q8WW12	178 aa	Known RBP	11.86	□□□□□ -0.51
PSMD13-215	ENST00000621534	FANCD2OS	Q96PS1	177 aa		11.86	□□□□□ -0.51
PSMD13-215	ENST00000621534	ESM1	Q9NQ30	184 aa		11.86	□□□□□ -0.51
PSMD13-215	ENST00000621534	IGLV11-55	A0A075B6I3	123 aa		11.85	□□□□□ -0.51
PSMD13-215	ENST00000621534	TRAV41	A0A0B4J266	112 aa		11.85	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms