RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 SDK2Q58EX2 2172 aa8.18□□□□□ -1.1
CLTCL1-211ENST00000621271 MDC1Q14676 2089 aaKnown RBP8.18□□□□□ -1.1
CLTCL1-211ENST00000621271 YPEL1O60688 119 aa8.18□□□□□ -1.1
CLTCL1-211ENST00000621271 ZNF585BQ52M93 769 aa8.18□□□□□ -1.1
CLTCL1-211ENST00000621271 BRD3OSQ6XYD6 125 aa8.18□□□□□ -1.1
CLTCL1-211ENST00000621271 ZNF600Q6ZNG1 722 aa8.18□□□□□ -1.1
CLTCL1-211ENST00000621271 YPEL2Q96QA6 119 aa8.18□□□□□ -1.1
CLTCL1-211ENST00000621271 MGAMO43451 1857 aa8.18□□□□□ -1.1
CLTCL1-211ENST00000621271 H7C2G1 150 aa8.17□□□□□ -1.1
CLTCL1-211ENST00000621271 K7ERU9 68 aa8.17□□□□□ -1.1
CLTCL1-211ENST00000621271 C1QL2Q7Z5L3 287 aa8.17□□□□□ -1.1
CLTCL1-211ENST00000621271 C17orf82Q86X59 251 aaPredicted RBP8.17□□□□□ -1.1
CLTCL1-211ENST00000621271 CACNG8Q8WXS5 425 aa8.17□□□□□ -1.1
CLTCL1-211ENST00000621271 A6NDN8 102 aa8.17□□□□□ -1.1
CLTCL1-211ENST00000621271 MALP21145 153 aa8.17□□□□□ -1.1
CLTCL1-211ENST00000621271 NBL1P41271 181 aa8.17□□□□□ -1.1
CLTCL1-211ENST00000621271 KCNS1Q96KK3 526 aa8.17□□□□□ -1.1
CLTCL1-211ENST00000621271 A0A0G2JMZ2 1700 aa8.17□□□□□ -1.1
CLTCL1-211ENST00000621271 HLA-DQA1P01909 254 aa8.17□□□□□ -1.1
CLTCL1-211ENST00000621271 TMEM187Q14656 261 aa8.17□□□□□ -1.1
CLTCL1-211ENST00000621271 TMEM219Q86XT9 240 aa8.17□□□□□ -1.1
CLTCL1-211ENST00000621271 BMPERQ8N8U9 685 aa8.17□□□□□ -1.1
CLTCL1-211ENST00000621271 FLVCR1-AS1Q8TAF5 88 aa8.17□□□□□ -1.1
CLTCL1-211ENST00000621271 C2orf88Q9BSF0 95 aa8.17□□□□□ -1.1
CLTCL1-211ENST00000621271 TCTAP57738 103 aa8.17□□□□□ -1.1
CLTCL1-211ENST00000621271 PAX8Q06710 450 aa8.17□□□□□ -1.1
CLTCL1-211ENST00000621271 SRSF7Q16629 238 aaKnown RBP eCLIP8.17□□□□□ -1.1
CLTCL1-211ENST00000621271 MDS2Q8NDY4 140 aa8.17□□□□□ -1.1
CLTCL1-211ENST00000621271 SLC50A1Q9BRV3 221 aa8.17□□□□□ -1.1
CLTCL1-211ENST00000621271 TM2D1Q9BX74 207 aa8.17□□□□□ -1.1
CLTCL1-211ENST00000621271 MBD3L4A6NDZ8 208 aaPredicted RBP8.16□□□□□ -1.1
CLTCL1-211ENST00000621271 MBD3L3A6NE82 208 aaPredicted RBP8.16□□□□□ -1.1
CLTCL1-211ENST00000621271 MBD3L5A6NJ08 208 aaPredicted RBP8.16□□□□□ -1.1
CLTCL1-211ENST00000621271 ERVK11-1P61568 191 aa8.16□□□□□ -1.1
CLTCL1-211ENST00000621271 MINOS1Q5TGZ0 78 aa8.16□□□□□ -1.1
CLTCL1-211ENST00000621271 TMEM183AQ8IXX5 376 aa8.16□□□□□ -1.1
CLTCL1-211ENST00000621271 MBD3L2Q8NHZ7 208 aaPredicted RBP8.16□□□□□ -1.1
CLTCL1-211ENST00000621271 MINOS1-NBL1R4GNA1 71 aa8.16□□□□□ -1.1
CLTCL1-211ENST00000621271 RPL24P83731 157 aaKnown RBP8.16□□□□□ -1.1
CLTCL1-211ENST00000621271 MESP1Q9BRJ9 268 aa8.16□□□□□ -1.1
CLTCL1-211ENST00000621271 AICDAQ9GZX7 198 aa8.16□□□□□ -1.1
CLTCL1-211ENST00000621271 OOSP1A8MZH6 123 aa8.16□□□□□ -1.1
CLTCL1-211ENST00000621271 GCHFRP30047 84 aa8.16□□□□□ -1.1
CLTCL1-211ENST00000621271 OR5AN1Q8NGI8 311 aa8.16□□□□□ -1.1
CLTCL1-211ENST00000621271 OR52E5Q8NH55 327 aa8.16□□□□□ -1.1
CLTCL1-211ENST00000621271 TP53RKQ96S44 253 aa8.16□□□□□ -1.1
CLTCL1-211ENST00000621271 ZNF256Q9Y2P7 627 aaPredicted RBP8.16□□□□□ -1.1
CLTCL1-211ENST00000621271 A0A1B0GTI1 187 aa8.16□□□□□ -1.1
CLTCL1-211ENST00000621271 ZNF415Q09FC8 603 aa8.16□□□□□ -1.1
CLTCL1-211ENST00000621271 ZNF506Q5JVG8 444 aa8.16□□□□□ -1.1
CLTCL1-211ENST00000621271 PLPPR1Q8TBJ4 325 aa8.16□□□□□ -1.1
CLTCL1-211ENST00000621271 GLMPQ8WWB7 406 aa8.16□□□□□ -1.1
CLTCL1-211ENST00000621271 RNF166Q96A37 237 aaPredicted RBP8.16□□□□□ -1.1
CLTCL1-211ENST00000621271 Q96MF0 132 aa8.16□□□□□ -1.1
CLTCL1-211ENST00000621271 TMEM70Q9BUB7 260 aa8.16□□□□□ -1.1
CLTCL1-211ENST00000621271 MRPL13Q9BYD1 178 aaKnown RBP8.16□□□□□ -1.1
CLTCL1-211ENST00000621271 BPESC1Q9GZL8 116 aa8.16□□□□□ -1.1
CLTCL1-211ENST00000621271 TOMM7Q9P0U1 55 aa8.16□□□□□ -1.1
CLTCL1-211ENST00000621271 UQCR10Q9UDW1 63 aa8.16□□□□□ -1.1
CLTCL1-211ENST00000621271 SLC25A15Q9Y619 301 aa8.16□□□□□ -1.1
CLTCL1-211ENST00000621271 CD7P09564 240 aa8.16□□□□□ -1.1
CLTCL1-211ENST00000621271 Q0VFX4 171 aa8.16□□□□□ -1.1
CLTCL1-211ENST00000621271 PVRIGQ6DKI7 326 aa8.16□□□□□ -1.1
CLTCL1-211ENST00000621271 UPK2O00526 184 aa8.15□□□□□ -1.1
CLTCL1-211ENST00000621271 TEX38Q6PEX7 206 aa8.15□□□□□ -1.1
CLTCL1-211ENST00000621271 ALPK2Q86TB3 2170 aa8.15□□□□□ -1.1
CLTCL1-211ENST00000621271 HOXA5P20719 270 aa8.15□□□□□ -1.1
CLTCL1-211ENST00000621271 SPATA45Q537H7 98 aa8.15□□□□□ -1.1
CLTCL1-211ENST00000621271 KLHL30-AS1Q8NEE0 82 aa8.15□□□□□ -1.1
CLTCL1-211ENST00000621271 IGHV2-26A0A0B4J1V2 119 aa8.15□□□□□ -1.11
CLTCL1-211ENST00000621271 TMEM178BH3BS89 294 aa8.15□□□□□ -1.11
CLTCL1-211ENST00000621271 CD5P06127 495 aa8.15□□□□□ -1.11
CLTCL1-211ENST00000621271 IGFBP2P18065 325 aa8.15□□□□□ -1.11
CLTCL1-211ENST00000621271 GATA3P23771 443 aa8.15□□□□□ -1.11
CLTCL1-211ENST00000621271 GPX4P36969 197 aaPredicted RBP8.15□□□□□ -1.11
CLTCL1-211ENST00000621271 CACNG7P62955 275 aa8.15□□□□□ -1.11
CLTCL1-211ENST00000621271 ZNF525Q8N782 197 aa8.15□□□□□ -1.11
CLTCL1-211ENST00000621271 OR9G4Q8NGQ1 327 aa8.15□□□□□ -1.11
CLTCL1-211ENST00000621271 THSD7BQ9C0I4 1608 aa8.15□□□□□ -1.11
CLTCL1-211ENST00000621271 DIDO1Q9BTC0 2240 aaKnown RBP8.15□□□□□ -1.11
CLTCL1-211ENST00000621271 AGAP20933 346 aa8.15□□□□□ -1.11
CLTCL1-211ENST00000621271 PMCHL1Q16048 86 aa8.15□□□□□ -1.11
CLTCL1-211ENST00000621271 MORN2Q502X0 79 aa8.15□□□□□ -1.11
CLTCL1-211ENST00000621271 H3BRM9 83 aa8.14□□□□□ -1.11
CLTCL1-211ENST00000621271 PSCAO43653 123 aa8.14□□□□□ -1.11
CLTCL1-211ENST00000621271 MST1P26927 711 aa8.14□□□□□ -1.11
CLTCL1-211ENST00000621271 PRR30Q53SZ7 412 aaPredicted RBP8.14□□□□□ -1.11
CLTCL1-211ENST00000621271 LY6G6FQ5SQ64 297 aa8.14□□□□□ -1.11
CLTCL1-211ENST00000621271 GGNQ86UU5 652 aa8.14□□□□□ -1.11
CLTCL1-211ENST00000621271 RNF125Q96EQ8 232 aa8.14□□□□□ -1.11
CLTCL1-211ENST00000621271 SOX21Q9Y651 276 aaPredicted RBP8.14□□□□□ -1.11
CLTCL1-211ENST00000621271 PIKFYVEQ9Y2I7 2098 aa8.14□□□□□ -1.11
CLTCL1-211ENST00000621271 THADAQ6YHU6 1953 aa8.14□□□□□ -1.11
CLTCL1-211ENST00000621271 CUL9Q8IWT3 2517 aa8.14□□□□□ -1.11
CLTCL1-211ENST00000621271 PCP4P48539 62 aa8.14□□□□□ -1.11
CLTCL1-211ENST00000621271 PSMG4Q5JS54 123 aa8.14□□□□□ -1.11
CLTCL1-211ENST00000621271 LINC00114Q6XXX2 140 aa8.14□□□□□ -1.11
CLTCL1-211ENST00000621271 A0A087WWC5 75 aa8.14□□□□□ -1.11
CLTCL1-211ENST00000621271 FBLL1A6NHQ2 334 aaKnown RBP8.14□□□□□ -1.11
CLTCL1-211ENST00000621271 A6NNC1 897 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms