RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 CYSLTR1Q9Y271 337 aa8.58□□□□□ -1.04
VPS11-207ENST00000620429 IGKV1-39P01597 117 aa8.57□□□□□ -1.04
VPS11-207ENST00000620429 IGKV1D-39P04432 117 aa8.57□□□□□ -1.04
VPS11-207ENST00000620429 FGF6P10767 208 aa8.57□□□□□ -1.04
VPS11-207ENST00000620429 SLC35B1P78383 322 aa8.57□□□□□ -1.04
VPS11-207ENST00000620429 SRSF6Q13247 344 aaKnown RBP8.57□□□□□ -1.04
VPS11-207ENST00000620429 LPAL2Q16609 132 aa8.57□□□□□ -1.04
VPS11-207ENST00000620429 SAMD5Q5TGI4 173 aa8.57□□□□□ -1.04
VPS11-207ENST00000620429 FAM27BQ5VT28 67 aa8.57□□□□□ -1.04
VPS11-207ENST00000620429 IGF2-ASQ6U949 168 aa8.57□□□□□ -1.04
VPS11-207ENST00000620429 LCNL1Q6ZST4 164 aa8.57□□□□□ -1.04
VPS11-207ENST00000620429 CHCHD1Q96BP2 118 aaKnown RBP8.57□□□□□ -1.04
VPS11-207ENST00000620429 C19orf25Q9UFG5 118 aaPredicted RBP8.57□□□□□ -1.04
VPS11-207ENST00000620429 SYNGR3O43761 229 aa8.57□□□□□ -1.04
VPS11-207ENST00000620429 LEPROTL1O95214 131 aa8.57□□□□□ -1.04
VPS11-207ENST00000620429 CA1P00915 261 aaPredicted RBP8.57□□□□□ -1.04
VPS11-207ENST00000620429 OR5AL1P0C617 328 aa8.57□□□□□ -1.04
VPS11-207ENST00000620429 CCL4P13236 92 aa8.57□□□□□ -1.04
VPS11-207ENST00000620429 MOB1BQ7L9L4 216 aa8.57□□□□□ -1.04
VPS11-207ENST00000620429 ZNF645Q8N7E2 425 aa8.57□□□□□ -1.04
VPS11-207ENST00000620429 Q8N7P7 452 aa8.57□□□□□ -1.04
VPS11-207ENST00000620429 ZNF611Q8N823 705 aa8.57□□□□□ -1.04
VPS11-207ENST00000620429 A0A1W2PPV4 95 aa8.56□□□□□ -1.04
VPS11-207ENST00000620429 HELTA6NFD8 242 aa8.56□□□□□ -1.04
VPS11-207ENST00000620429 HSPB6O14558 160 aa8.56□□□□□ -1.04
VPS11-207ENST00000620429 SIVA1O15304 175 aa8.56□□□□□ -1.04
VPS11-207ENST00000620429 CXorf1O96002 111 aa8.56□□□□□ -1.04
VPS11-207ENST00000620429 IGKV1-5P01602 117 aa8.56□□□□□ -1.04
VPS11-207ENST00000620429 FKBP2P26885 142 aaKnown RBP8.56□□□□□ -1.04
VPS11-207ENST00000620429 PEAR1Q5VY43 1037 aaPredicted RBP8.56□□□□□ -1.04
VPS11-207ENST00000620429 TMEM42Q69YG0 159 aa8.56□□□□□ -1.04
VPS11-207ENST00000620429 OR52E5Q8NH55 327 aa8.56□□□□□ -1.04
VPS11-207ENST00000620429 SPXQ9BT56 116 aa8.56□□□□□ -1.04
VPS11-207ENST00000620429 GGTLC1Q9BX51 225 aa8.56□□□□□ -1.04
VPS11-207ENST00000620429 RABAC1Q9UI14 185 aa8.56□□□□□ -1.04
VPS11-207ENST00000620429 ARL14EPLP0DKL9 152 aa8.56□□□□□ -1.04
VPS11-207ENST00000620429 ARL3P36405 182 aa8.56□□□□□ -1.04
VPS11-207ENST00000620429 CEACAM16Q2WEN9 425 aa8.56□□□□□ -1.04
VPS11-207ENST00000620429 LINC01545Q5VT33 79 aa8.56□□□□□ -1.04
VPS11-207ENST00000620429 DHRS13Q6UX07 377 aa8.56□□□□□ -1.04
VPS11-207ENST00000620429 FADS6Q8N9I5 356 aa8.56□□□□□ -1.04
VPS11-207ENST00000620429 OR51H1Q8NH63 302 aa8.56□□□□□ -1.04
VPS11-207ENST00000620429 RAB37Q96AX2 223 aa8.56□□□□□ -1.04
VPS11-207ENST00000620429 HARBI1Q96MB7 349 aa8.56□□□□□ -1.04
VPS11-207ENST00000620429 MAP1LC3CQ9BXW4 147 aa8.56□□□□□ -1.04
VPS11-207ENST00000620429 DEFB126Q9BYW3 111 aa8.56□□□□□ -1.04
VPS11-207ENST00000620429 SH2D2AQ9NP31 389 aa8.56□□□□□ -1.04
VPS11-207ENST00000620429 YTHDF2Q9Y5A9 579 aaKnown RBP8.56□□□□□ -1.04
VPS11-207ENST00000620429 IGHV1-24A0A0C4DH33 117 aa8.55□□□□□ -1.04
VPS11-207ENST00000620429 KBTBD11-OT1A0A1B0GTJ5 212 aa8.55□□□□□ -1.04
VPS11-207ENST00000620429 SPINK8P0C7L1 97 aa8.55□□□□□ -1.04
VPS11-207ENST00000620429 AREGP15514 252 aa8.55□□□□□ -1.04
VPS11-207ENST00000620429 ZNF32P17041 273 aa8.55□□□□□ -1.04
VPS11-207ENST00000620429 RPL8P62917 257 aaKnown RBP8.55□□□□□ -1.04
VPS11-207ENST00000620429 DAZAP2Q15038 168 aaPredicted RBP8.55□□□□□ -1.04
VPS11-207ENST00000620429 LINC00173Q6ZV60 143 aa8.55□□□□□ -1.04
VPS11-207ENST00000620429 OR9G4Q8NGQ1 327 aa8.55□□□□□ -1.04
VPS11-207ENST00000620429 OR10X1Q8NGY0 326 aa8.55□□□□□ -1.04
VPS11-207ENST00000620429 LRRC29Q8WV35 223 aa8.55□□□□□ -1.04
VPS11-207ENST00000620429 HSPB8Q9UJY1 196 aa8.55□□□□□ -1.04
VPS11-207ENST00000620429 HILPDAQ9Y5L2 63 aa8.55□□□□□ -1.04
VPS11-207ENST00000620429 hADV38S2A0JD32 116 aa8.55□□□□□ -1.04
VPS11-207ENST00000620429 C21orf140B9A014 251 aa8.55□□□□□ -1.04
VPS11-207ENST00000620429 CNIH1O95406 144 aa8.55□□□□□ -1.04
VPS11-207ENST00000620429 IGHV3-7P01780 117 aa8.55□□□□□ -1.04
VPS11-207ENST00000620429 B4GALT1P15291 398 aa8.55□□□□□ -1.04
VPS11-207ENST00000620429 TCL1AP56279 114 aa8.55□□□□□ -1.04
VPS11-207ENST00000620429 ATP5G2Q06055 141 aa8.55□□□□□ -1.04
VPS11-207ENST00000620429 OR4X2Q8NGF9 303 aa8.55□□□□□ -1.04
VPS11-207ENST00000620429 LINC00312Q9Y6C7 94 aa8.55□□□□□ -1.04
VPS11-207ENST00000620429 CELSR3Q9NYQ7 3312 aa8.54□□□□□ -1.04
VPS11-207ENST00000620429 hCG_38984A0A1B0GV85 526 aa8.54□□□□□ -1.04
VPS11-207ENST00000620429 TEPPQ6URK8 271 aa8.54□□□□□ -1.04
VPS11-207ENST00000620429 RNASE7Q9H1E1 156 aaKnown RBP8.54□□□□□ -1.04
VPS11-207ENST00000620429 DIDO1Q9BTC0 2240 aaKnown RBP8.54□□□□□ -1.04
VPS11-207ENST00000620429 KLF7O75840 302 aaPredicted RBP8.54□□□□□ -1.04
VPS11-207ENST00000620429 MGST1P10620 155 aaKnown RBP8.54□□□□□ -1.04
VPS11-207ENST00000620429 BCL3P20749 454 aa8.54□□□□□ -1.04
VPS11-207ENST00000620429 WFDC2Q14508 124 aa8.54□□□□□ -1.04
VPS11-207ENST00000620429 CENPWQ5EE01 88 aa8.54□□□□□ -1.04
VPS11-207ENST00000620429 MRPL14Q6P1L8 145 aaKnown RBP8.54□□□□□ -1.04
VPS11-207ENST00000620429 BOD1L2Q8IYS8 172 aa8.54□□□□□ -1.04
VPS11-207ENST00000620429 SMIM20Q8N5G0 67 aa8.54□□□□□ -1.04
VPS11-207ENST00000620429 TEX45Q8NA69 505 aa8.54□□□□□ -1.04
VPS11-207ENST00000620429 NDFIP1Q9BT67 221 aa8.54□□□□□ -1.04
VPS11-207ENST00000620429 ARRDC1-AS1Q9H2J1 176 aa8.54□□□□□ -1.04
VPS11-207ENST00000620429 UFC1Q9Y3C8 167 aa8.54□□□□□ -1.04
VPS11-207ENST00000620429 CHCHD2Q9Y6H1 151 aaPredicted RBP8.54□□□□□ -1.04
VPS11-207ENST00000620429 IGKV1-6A0A0C4DH72 117 aa8.53□□□□□ -1.04
VPS11-207ENST00000620429 RRHO14718 337 aa8.53□□□□□ -1.04
VPS11-207ENST00000620429 TNFSF11O14788 317 aa8.53□□□□□ -1.04
VPS11-207ENST00000620429 SYNGR1O43759 233 aa8.53□□□□□ -1.04
VPS11-207ENST00000620429 NEURL1O76050 574 aa8.53□□□□□ -1.04
VPS11-207ENST00000620429 CLDN14O95500 239 aa8.53□□□□□ -1.04
VPS11-207ENST00000620429 FCGR2BP31994 310 aaPredicted RBP8.53□□□□□ -1.04
VPS11-207ENST00000620429 FXYD3Q14802 87 aa8.53□□□□□ -1.04
VPS11-207ENST00000620429 GCSAMLQ5JQS6 135 aa8.53□□□□□ -1.04
VPS11-207ENST00000620429 MED12LQ86YW9 2145 aa8.53□□□□□ -1.04
VPS11-207ENST00000620429 STPG3Q8N7X2 389 aa8.53□□□□□ -1.04
VPS11-207ENST00000620429 GPR179Q6PRD1 2367 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms