RNA–Protein interactions for RNA: ENST00000619079.1

UPF3A-212, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-212ENST00000619079 GAGE10A6NGK3 116 aa8.91□□□□□ -0.98
UPF3A-212ENST00000619079 FOXH1O75593 365 aa8.91□□□□□ -0.98
UPF3A-212ENST00000619079 IGLV2-8P01709 118 aa8.91□□□□□ -0.98
UPF3A-212ENST00000619079 CELA3BP08861 270 aa8.91□□□□□ -0.98
UPF3A-212ENST00000619079 OR9G9P0C7N8 305 aa8.91□□□□□ -0.98
UPF3A-212ENST00000619079 CCL2P13500 99 aa8.91□□□□□ -0.98
UPF3A-212ENST00000619079 WT1P19544 449 aaPredicted RBP8.91□□□□□ -0.98
UPF3A-212ENST00000619079 ERVK11-1P61568 191 aa8.91□□□□□ -0.98
UPF3A-212ENST00000619079 ERVK-16P61578 105 aa8.91□□□□□ -0.98
UPF3A-212ENST00000619079 OR4S2Q8NH73 311 aa8.91□□□□□ -0.98
UPF3A-212ENST00000619079 OR2T6Q8NHC8 308 aa8.91□□□□□ -0.98
UPF3A-212ENST00000619079 ABHD3Q8WU67 409 aa8.91□□□□□ -0.98
UPF3A-212ENST00000619079 C19orf24Q9BVV8 132 aa8.91□□□□□ -0.98
UPF3A-212ENST00000619079 CLCF1Q9UBD9 225 aa8.91□□□□□ -0.98
UPF3A-212ENST00000619079 LOC102723996A0A087X1L8 192 aa8.91□□□□□ -0.98
UPF3A-212ENST00000619079 OR7C2O60412 319 aa8.91□□□□□ -0.98
UPF3A-212ENST00000619079 HBZP02008 142 aa8.91□□□□□ -0.98
UPF3A-212ENST00000619079 OR5AL1P0C617 328 aa8.91□□□□□ -0.98
UPF3A-212ENST00000619079 UCNP55089 124 aa8.91□□□□□ -0.98
UPF3A-212ENST00000619079 PRR20EP86478 221 aa8.91□□□□□ -0.98
UPF3A-212ENST00000619079 PRR20CP86479 221 aa8.91□□□□□ -0.98
UPF3A-212ENST00000619079 PRR20DP86480 221 aa8.91□□□□□ -0.98
UPF3A-212ENST00000619079 PRR20BP86481 221 aa8.91□□□□□ -0.98
UPF3A-212ENST00000619079 PRR20AP86496 221 aa8.91□□□□□ -0.98
UPF3A-212ENST00000619079 OR1C1Q15619 314 aa8.91□□□□□ -0.98
UPF3A-212ENST00000619079 SLC35E4Q6ICL7 350 aa8.91□□□□□ -0.98
UPF3A-212ENST00000619079 FER1L6-AS1Q8NA97 138 aa8.91□□□□□ -0.98
UPF3A-212ENST00000619079 ST6GALNAC6Q969X2 333 aa8.91□□□□□ -0.98
UPF3A-212ENST00000619079 GRAMD2BQ96HH9 432 aa8.91□□□□□ -0.98
UPF3A-212ENST00000619079 SCRT2Q9NQ03 307 aa8.91□□□□□ -0.98
UPF3A-212ENST00000619079 GTF3C1Q12789 2109 aa8.91□□□□□ -0.98
UPF3A-212ENST00000619079 G3V4G9 280 aa8.9□□□□□ -0.98
UPF3A-212ENST00000619079 HAND1O96004 215 aa8.9□□□□□ -0.98
UPF3A-212ENST00000619079 RPL8P62917 257 aaKnown RBP8.9□□□□□ -0.98
UPF3A-212ENST00000619079 LHFPL4Q7Z7J7 247 aa8.9□□□□□ -0.98
UPF3A-212ENST00000619079 YRDCQ86U90 279 aaKnown RBP8.9□□□□□ -0.98
UPF3A-212ENST00000619079 AP1S3Q96PC3 154 aa8.9□□□□□ -0.98
UPF3A-212ENST00000619079 GP6Q9HCN6 339 aa8.9□□□□□ -0.98
UPF3A-212ENST00000619079 GCM1Q9NP62 436 aa8.9□□□□□ -0.98
UPF3A-212ENST00000619079 ACACBO00763 2458 aa8.9□□□□□ -0.98
UPF3A-212ENST00000619079 TRAV8-6A0A0B4J262 113 aa8.9□□□□□ -0.99
UPF3A-212ENST00000619079 C7orf71A4D174 169 aa8.9□□□□□ -0.99
UPF3A-212ENST00000619079 LINC00473A8K010 186 aa8.9□□□□□ -0.99
UPF3A-212ENST00000619079 LEPROTL1O95214 131 aa8.9□□□□□ -0.99
UPF3A-212ENST00000619079 MIR17HGQ75NE6 70 aa8.9□□□□□ -0.99
UPF3A-212ENST00000619079 PPP1R32Q7Z5V6 425 aa8.9□□□□□ -0.99
UPF3A-212ENST00000619079 SPATA12Q7Z6I5 190 aa8.9□□□□□ -0.99
UPF3A-212ENST00000619079 FAM216AQ8WUB2 273 aa8.9□□□□□ -0.99
UPF3A-212ENST00000619079 MBD6Q96DN6 1003 aa8.9□□□□□ -0.99
UPF3A-212ENST00000619079 DUSP13Q9UII6 198 aa8.9□□□□□ -0.99
UPF3A-212ENST00000619079 ANKRD11Q6UB99 2663 aaPredicted RBP8.89□□□□□ -0.99
UPF3A-212ENST00000619079 IGKV3D-15A0A087WSY6 115 aa8.89□□□□□ -0.99
UPF3A-212ENST00000619079 A0A096LPE4 126 aa8.89□□□□□ -0.99
UPF3A-212ENST00000619079 A0A1W2PPZ6 126 aa8.89□□□□□ -0.99
UPF3A-212ENST00000619079 GGTLC3B5MD39 225 aa8.89□□□□□ -0.99
UPF3A-212ENST00000619079 IGHV3-9P01782 118 aa8.89□□□□□ -0.99
UPF3A-212ENST00000619079 GPR183P32249 361 aa8.89□□□□□ -0.99
UPF3A-212ENST00000619079 DUTP33316 252 aaKnown RBP8.89□□□□□ -0.99
UPF3A-212ENST00000619079 RIPPLY3P57055 190 aa8.89□□□□□ -0.99
UPF3A-212ENST00000619079 DEFB109BQ30KR1 87 aa8.89□□□□□ -0.99
UPF3A-212ENST00000619079 FAM120AOSQ5T036 256 aa8.89□□□□□ -0.99
UPF3A-212ENST00000619079 C1orf159Q96HA4 380 aa8.89□□□□□ -0.99
UPF3A-212ENST00000619079 FER1L6-AS2Q96M78 137 aa8.89□□□□□ -0.99
UPF3A-212ENST00000619079 PRRG4Q9BZD6 226 aa8.89□□□□□ -0.99
UPF3A-212ENST00000619079 CLEC5AQ9NY25 188 aa8.89□□□□□ -0.99
UPF3A-212ENST00000619079 EML6Q6ZMW3 1958 aa8.89□□□□□ -0.99
UPF3A-212ENST00000619079 LOC102724200A0A096LPH7 203 aaPredicted RBP8.89□□□□□ -0.99
UPF3A-212ENST00000619079 IGHV1-45A0A0A0MS14 117 aa8.89□□□□□ -0.99
UPF3A-212ENST00000619079 hDV102S1A0JD36 115 aa8.89□□□□□ -0.99
UPF3A-212ENST00000619079 P04436 131 aa8.89□□□□□ -0.99
UPF3A-212ENST00000619079 LIPFP07098 398 aa8.89□□□□□ -0.99
UPF3A-212ENST00000619079 UFSP1Q6NVU6 142 aa8.89□□□□□ -0.99
UPF3A-212ENST00000619079 NUP35Q8NFH5 326 aa8.89□□□□□ -0.99
UPF3A-212ENST00000619079 MAP1LC3CQ9BXW4 147 aa8.89□□□□□ -0.99
UPF3A-212ENST00000619079 USF3Q68DE3 2245 aa8.88□□□□□ -0.99
UPF3A-212ENST00000619079 ZZEF1O43149 2961 aa8.88□□□□□ -0.99
UPF3A-212ENST00000619079 K7ENP7 123 aa8.88□□□□□ -0.99
UPF3A-212ENST00000619079 CELA2AP08217 269 aa8.88□□□□□ -0.99
UPF3A-212ENST00000619079 HIST1H1EP10412 219 aaKnown RBP8.88□□□□□ -0.99
UPF3A-212ENST00000619079 INO80CQ6PI98 192 aaPredicted RBP8.88□□□□□ -0.99
UPF3A-212ENST00000619079 ABHD12Q8N2K0 398 aa8.88□□□□□ -0.99
UPF3A-212ENST00000619079 KIR3DL3Q8N743 410 aa8.88□□□□□ -0.99
UPF3A-212ENST00000619079 IMMP1LQ96LU5 166 aa8.88□□□□□ -0.99
UPF3A-212ENST00000619079 OR51B2Q9Y5P1 312 aa8.88□□□□□ -0.99
UPF3A-212ENST00000619079 A6NDN8 102 aa8.88□□□□□ -0.99
UPF3A-212ENST00000619079 FCGR3BO75015 233 aa8.88□□□□□ -0.99
UPF3A-212ENST00000619079 SAP30O75446 220 aa8.88□□□□□ -0.99
UPF3A-212ENST00000619079 ACTL6BO94805 426 aa8.88□□□□□ -0.99
UPF3A-212ENST00000619079 CA1P00915 261 aaPredicted RBP8.88□□□□□ -0.99
UPF3A-212ENST00000619079 SCGB1A1P11684 91 aa8.88□□□□□ -0.99
UPF3A-212ENST00000619079 COX6A1P12074 109 aa8.88□□□□□ -0.99
UPF3A-212ENST00000619079 GATA2P23769 480 aaPredicted RBP8.88□□□□□ -0.99
UPF3A-212ENST00000619079 BMI1P35226 326 aa8.88□□□□□ -0.99
UPF3A-212ENST00000619079 RBPJQ06330 500 aa8.88□□□□□ -0.99
UPF3A-212ENST00000619079 C1orf185Q5T7R7 199 aa8.88□□□□□ -0.99
UPF3A-212ENST00000619079 NHLRC2Q8NBF2 726 aa8.88□□□□□ -0.99
UPF3A-212ENST00000619079 OR1B1Q8NGR6 318 aa8.88□□□□□ -0.99
UPF3A-212ENST00000619079 SARAFQ96BY9 339 aa8.88□□□□□ -0.99
UPF3A-212ENST00000619079 NABP2Q9BQ15 211 aa8.88□□□□□ -0.99
UPF3A-212ENST00000619079 ENY2Q9NPA8 101 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms