RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 NDUFS8O00217 210 aa10.04□□□□□ -0.8
CIITA-212ENST00000618207 PPIAL4GP0DN37 164 aa10.04□□□□□ -0.8
CIITA-212ENST00000618207 NPPCP23582 126 aa10.04□□□□□ -0.8
CIITA-212ENST00000618207 DLX6P56179 175 aa10.04□□□□□ -0.8
CIITA-212ENST00000618207 GNB1P62873 340 aa10.04□□□□□ -0.8
CIITA-212ENST00000618207 POU2AF1Q16633 256 aa10.04□□□□□ -0.8
CIITA-212ENST00000618207 OR4P4Q8NGL7 312 aa10.04□□□□□ -0.8
CIITA-212ENST00000618207 C22orf15Q8WYQ4 148 aa10.04□□□□□ -0.8
CIITA-212ENST00000618207 TMEM186Q96B77 213 aa10.04□□□□□ -0.8
CIITA-212ENST00000618207 TMEM133Q9H2Q1 129 aa10.04□□□□□ -0.8
CIITA-212ENST00000618207 ZNF430Q9H8G1 570 aaPredicted RBP10.04□□□□□ -0.8
CIITA-212ENST00000618207 KAAG1Q9UBP8 84 aa10.04□□□□□ -0.8
CIITA-212ENST00000618207 OR10J1P30954 320 aa10.04□□□□□ -0.8
CIITA-212ENST00000618207 TMEM241Q24JQ0 296 aa10.04□□□□□ -0.8
CIITA-212ENST00000618207 C4orf17Q53FE4 359 aa10.04□□□□□ -0.8
CIITA-212ENST00000618207 HCP5Q6MZN7 132 aa10.04□□□□□ -0.8
CIITA-212ENST00000618207 BET1LQ9NYM9 111 aa10.04□□□□□ -0.8
CIITA-212ENST00000618207 DOK5Q9P104 306 aa10.04□□□□□ -0.8
CIITA-212ENST00000618207 IGHV2-26A0A0B4J1V2 119 aa10.03□□□□□ -0.8
CIITA-212ENST00000618207 NDUFS7O75251 213 aa10.03□□□□□ -0.8
CIITA-212ENST00000618207 MPDU1O75352 247 aa10.03□□□□□ -0.8
CIITA-212ENST00000618207 NDUFB4O95168 129 aa10.03□□□□□ -0.8
CIITA-212ENST00000618207 CD24P25063 80 aa10.03□□□□□ -0.8
CIITA-212ENST00000618207 UQCRFS1P47985 274 aa10.03□□□□□ -0.8
CIITA-212ENST00000618207 ARF6P62330 175 aa10.03□□□□□ -0.8
CIITA-212ENST00000618207 ST6GALNAC6Q969X2 333 aa10.03□□□□□ -0.8
CIITA-212ENST00000618207 WASHC3Q9Y3C0 194 aa10.03□□□□□ -0.8
CIITA-212ENST00000618207 LSM4Q9Y4Z0 139 aaKnown RBP10.03□□□□□ -0.8
CIITA-212ENST00000618207 ZFYVE26Q68DK2 2539 aa10.03□□□□□ -0.8
CIITA-212ENST00000618207 RNASE2P10153 161 aaKnown RBP10.03□□□□□ -0.8
CIITA-212ENST00000618207 CDKN1AP38936 164 aa10.03□□□□□ -0.8
CIITA-212ENST00000618207 PPOXP50336 477 aa10.03□□□□□ -0.8
CIITA-212ENST00000618207 RBX1P62877 108 aa10.03□□□□□ -0.8
CIITA-212ENST00000618207 SSBP2P81877 361 aaPredicted RBP10.03□□□□□ -0.8
CIITA-212ENST00000618207 WT1-ASQ06250 92 aa10.03□□□□□ -0.8
CIITA-212ENST00000618207 RAB31Q13636 194 aa10.03□□□□□ -0.8
CIITA-212ENST00000618207 GAMTQ14353 236 aa10.03□□□□□ -0.8
CIITA-212ENST00000618207 NEIL1Q96FI4 390 aaPredicted RBP10.03□□□□□ -0.8
CIITA-212ENST00000618207 ATG101Q9BSB4 218 aa10.03□□□□□ -0.8
CIITA-212ENST00000618207 MANBALQ9NQG1 85 aa10.03□□□□□ -0.8
CIITA-212ENST00000618207 PAX1P15863 534 aa10.02□□□□□ -0.8
CIITA-212ENST00000618207 RPL23P62829 140 aaKnown RBP10.02□□□□□ -0.8
CIITA-212ENST00000618207 BSXQ3C1V8 233 aa10.02□□□□□ -0.8
CIITA-212ENST00000618207 TMEM30BQ3MIR4 351 aa10.02□□□□□ -0.8
CIITA-212ENST00000618207 ZNF841Q6ZN19 808 aa10.02□□□□□ -0.8
CIITA-212ENST00000618207 MIR17HGQ75NE6 70 aa10.02□□□□□ -0.8
CIITA-212ENST00000618207 LHFPL4Q7Z7J7 247 aa10.02□□□□□ -0.8
CIITA-212ENST00000618207 OR1L8Q8NGR8 309 aa10.02□□□□□ -0.8
CIITA-212ENST00000618207 NAT8Q9UHE5 227 aa10.02□□□□□ -0.8
CIITA-212ENST00000618207 ZNF257Q9Y2Q1 563 aa10.02□□□□□ -0.8
CIITA-212ENST00000618207 INSIG2Q9Y5U4 225 aa10.02□□□□□ -0.8
CIITA-212ENST00000618207 OR10J4P0C629 311 aa10.02□□□□□ -0.81
CIITA-212ENST00000618207 AGAP20933 346 aa10.02□□□□□ -0.81
CIITA-212ENST00000618207 CHRNA7P36544 502 aa10.02□□□□□ -0.81
CIITA-212ENST00000618207 ERHP84090 104 aaKnown RBP10.02□□□□□ -0.81
CIITA-212ENST00000618207 TMEM177Q53S58 311 aa10.02□□□□□ -0.81
CIITA-212ENST00000618207 C16orf82Q7Z2V1 217 aa10.02□□□□□ -0.81
CIITA-212ENST00000618207 PNKDQ8N490 385 aa10.02□□□□□ -0.81
CIITA-212ENST00000618207 OR5B3Q8NH48 314 aa10.02□□□□□ -0.81
CIITA-212ENST00000618207 ELOVL1Q9BW60 279 aa10.02□□□□□ -0.81
CIITA-212ENST00000618207 FKBP11Q9NYL4 201 aa10.02□□□□□ -0.81
CIITA-212ENST00000618207 CACNA1AO00555 2505 aa10.02□□□□□ -0.81
CIITA-212ENST00000618207 CLDN34H7C241 214 aa10.02□□□□□ -0.81
CIITA-212ENST00000618207 TRGC2P03986 189 aa10.02□□□□□ -0.81
CIITA-212ENST00000618207 TNXAQ16473 311 aa10.02□□□□□ -0.81
CIITA-212ENST00000618207 FBXL19-AS1Q494R0 122 aa10.02□□□□□ -0.81
CIITA-212ENST00000618207 DNLZQ5SXM8 178 aa10.02□□□□□ -0.81
CIITA-212ENST00000618207 YPEL4Q96NS1 127 aa10.02□□□□□ -0.81
CIITA-212ENST00000618207 NDUFA4L2Q9NRX3 87 aa10.02□□□□□ -0.81
CIITA-212ENST00000618207 HILPDAQ9Y5L2 63 aa10.02□□□□□ -0.81
CIITA-212ENST00000618207 A0A087WWC5 75 aa10.01□□□□□ -0.81
CIITA-212ENST00000618207 A0A1W2PPR1 153 aa10.01□□□□□ -0.81
CIITA-212ENST00000618207 CGB1A6NKQ9 187 aa10.01□□□□□ -0.81
CIITA-212ENST00000618207 SEC14L6B5MCN3 397 aa10.01□□□□□ -0.81
CIITA-212ENST00000618207 STAG3L2P0CL84 134 aa10.01□□□□□ -0.81
CIITA-212ENST00000618207 STAG3L3P0CL85 134 aa10.01□□□□□ -0.81
CIITA-212ENST00000618207 USF1P22415 310 aaPredicted RBP10.01□□□□□ -0.81
CIITA-212ENST00000618207 PNRC1Q12796 327 aaPredicted RBP10.01□□□□□ -0.81
CIITA-212ENST00000618207 CDPF1Q6NVV7 123 aa10.01□□□□□ -0.81
CIITA-212ENST00000618207 PDPNQ86YL7 162 aa10.01□□□□□ -0.81
CIITA-212ENST00000618207 TMEM208Q9BTX3 173 aa10.01□□□□□ -0.81
CIITA-212ENST00000618207 SCO2A0A1W2PP80 73 aa10.01□□□□□ -0.81
CIITA-212ENST00000618207 C22orf46C9J442 243 aa10.01□□□□□ -0.81
CIITA-212ENST00000618207 AP4M1O00189 453 aa10.01□□□□□ -0.81
CIITA-212ENST00000618207 IGLV2-23P01705 113 aa10.01□□□□□ -0.81
CIITA-212ENST00000618207 NPSP0C0P6 89 aa10.01□□□□□ -0.81
CIITA-212ENST00000618207 KLRD1Q13241 179 aa10.01□□□□□ -0.81
CIITA-212ENST00000618207 CYP2G1PQ6ZSU1 146 aa10.01□□□□□ -0.81
CIITA-212ENST00000618207 OR8B3Q8NGG8 313 aa10.01□□□□□ -0.81
CIITA-212ENST00000618207 OR8B2Q96RD0 313 aa10.01□□□□□ -0.81
CIITA-212ENST00000618207 RAB1BQ9H0U4 201 aa10.01□□□□□ -0.81
CIITA-212ENST00000618207 YTHDF2Q9Y5A9 579 aaKnown RBP10.01□□□□□ -0.81
CIITA-212ENST00000618207 CELSR1Q9NYQ6 3014 aa10□□□□□ -0.81
CIITA-212ENST00000618207 A0A0U1RQK1 487 aa10□□□□□ -0.81
CIITA-212ENST00000618207 TMEM250H0YL14 139 aa10□□□□□ -0.81
CIITA-212ENST00000618207 OR7C2O60412 319 aa10□□□□□ -0.81
CIITA-212ENST00000618207 NDUFA6P56556 154 aa10□□□□□ -0.81
CIITA-212ENST00000618207 VMA21Q3ZAQ7 101 aa10□□□□□ -0.81
CIITA-212ENST00000618207 PDZD11Q5EBL8 140 aa10□□□□□ -0.81
CIITA-212ENST00000618207 ZNF114Q8NC26 417 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms