RNA–Protein interactions for RNA: ENST00000616944.4

CBWD1-225, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-225ENST00000616944 WNT10AQ9GZT5 417 aa11.91□□□□□ -0.5
CBWD1-225ENST00000616944 WFDC1Q9HC57 220 aa11.91□□□□□ -0.5
CBWD1-225ENST00000616944 PAIP2BQ9ULR5 123 aaKnown RBP11.91□□□□□ -0.5
CBWD1-225ENST00000616944 TRIM77I1YAP6 450 aa11.9□□□□□ -0.5
CBWD1-225ENST00000616944 AP4M1O00189 453 aa11.9□□□□□ -0.5
CBWD1-225ENST00000616944 TAAR5O14804 337 aa11.9□□□□□ -0.5
CBWD1-225ENST00000616944 HBG1P69891 147 aa11.9□□□□□ -0.5
CBWD1-225ENST00000616944 HBG2P69892 147 aa11.9□□□□□ -0.5
CBWD1-225ENST00000616944 SLC38A11Q08AI6 406 aa11.9□□□□□ -0.5
CBWD1-225ENST00000616944 UNQ5815/PRO19632Q6UWF5 114 aa11.9□□□□□ -0.5
CBWD1-225ENST00000616944 RNASEH2CQ8TDP1 164 aaKnown RBP11.9□□□□□ -0.5
CBWD1-225ENST00000616944 PINX1Q96BK5 328 aaKnown RBP11.9□□□□□ -0.5
CBWD1-225ENST00000616944 SMIM3Q9BZL3 60 aa11.9□□□□□ -0.5
CBWD1-225ENST00000616944 PRSS22Q9GZN4 317 aa11.9□□□□□ -0.5
CBWD1-225ENST00000616944 TRAV41A0A0B4J266 112 aa11.89□□□□□ -0.51
CBWD1-225ENST00000616944 KANTRA0A1W2PQU2 76 aa11.89□□□□□ -0.51
CBWD1-225ENST00000616944 FAM181BA6NEQ2 426 aa11.89□□□□□ -0.51
CBWD1-225ENST00000616944 SOX15O60248 233 aa11.89□□□□□ -0.51
CBWD1-225ENST00000616944 IFNA4P05014 189 aa11.89□□□□□ -0.51
CBWD1-225ENST00000616944 RPL15P61313 204 aaKnown RBP11.89□□□□□ -0.51
CBWD1-225ENST00000616944 CFHR3Q02985 330 aa11.89□□□□□ -0.51
CBWD1-225ENST00000616944 CLINT1Q14677 625 aa11.89□□□□□ -0.51
CBWD1-225ENST00000616944 VWC2Q2TAL6 325 aa11.89□□□□□ -0.51
CBWD1-225ENST00000616944 OR1S2Q8NGQ3 325 aa11.89□□□□□ -0.51
CBWD1-225ENST00000616944 NOL4LQ96MY1 436 aaPredicted RBP11.89□□□□□ -0.51
CBWD1-225ENST00000616944 FANCD2OSQ96PS1 177 aa11.89□□□□□ -0.51
CBWD1-225ENST00000616944 FNDC4Q9H6D8 234 aaPredicted RBP11.89□□□□□ -0.51
CBWD1-225ENST00000616944 JMJD1CQ15652 2540 aa11.89□□□□□ -0.51
CBWD1-225ENST00000616944 IGLV11-55A0A075B6I3 123 aa11.89□□□□□ -0.51
CBWD1-225ENST00000616944 PPIFP30405 207 aaKnown RBP11.89□□□□□ -0.51
CBWD1-225ENST00000616944 UBA52P62987 128 aaKnown RBP11.89□□□□□ -0.51
CBWD1-225ENST00000616944 DLK1P80370 383 aa11.89□□□□□ -0.51
CBWD1-225ENST00000616944 TMEM95Q3KNT9 176 aa11.89□□□□□ -0.51
CBWD1-225ENST00000616944 OR1L6Q8NGR2 347 aa11.89□□□□□ -0.51
CBWD1-225ENST00000616944 ATP5SQ99766 215 aa11.89□□□□□ -0.51
CBWD1-225ENST00000616944 GGACTQ9BVM4 153 aa11.89□□□□□ -0.51
CBWD1-225ENST00000616944 LINC00527Q9UJ94 153 aa11.89□□□□□ -0.51
CBWD1-225ENST00000616944 CORTO00230 105 aa11.88□□□□□ -0.51
CBWD1-225ENST00000616944 PRH1P02810 166 aa11.88□□□□□ -0.51
CBWD1-225ENST00000616944 C4BPBP20851 252 aa11.88□□□□□ -0.51
CBWD1-225ENST00000616944 CD69Q07108 199 aa11.88□□□□□ -0.51
CBWD1-225ENST00000616944 ARSJQ5FYB0 599 aaPredicted RBP11.88□□□□□ -0.51
CBWD1-225ENST00000616944 RPL7L1Q6DKI1 246 aaKnown RBP11.88□□□□□ -0.51
CBWD1-225ENST00000616944 OR5T1Q8NG75 326 aa11.88□□□□□ -0.51
CBWD1-225ENST00000616944 TRBV9A0A0B4J1U6 114 aa11.87□□□□□ -0.51
CBWD1-225ENST00000616944 FNDC10F2Z333 226 aa11.87□□□□□ -0.51
CBWD1-225ENST00000616944 DEFA4P12838 97 aa11.87□□□□□ -0.51
CBWD1-225ENST00000616944 MDKP21741 143 aaPredicted RBP11.87□□□□□ -0.51
CBWD1-225ENST00000616944 ATP6V1FQ16864 119 aa11.87□□□□□ -0.51
CBWD1-225ENST00000616944 LILRB2Q8N423 598 aa11.87□□□□□ -0.51
CBWD1-225ENST00000616944 UBAC2Q8NBM4 344 aa11.87□□□□□ -0.51
CBWD1-225ENST00000616944 STOML3Q8TAV4 291 aa11.87□□□□□ -0.51
CBWD1-225ENST00000616944 CACNG8Q8WXS5 425 aa11.87□□□□□ -0.51
CBWD1-225ENST00000616944 JMJD8Q96S16 334 aa11.87□□□□□ -0.51
CBWD1-225ENST00000616944 TMEM147Q9BVK8 224 aa11.87□□□□□ -0.51
CBWD1-225ENST00000616944 I3L2K1 104 aa11.86□□□□□ -0.51
CBWD1-225ENST00000616944 K7EIM0 57 aa11.86□□□□□ -0.51
CBWD1-225ENST00000616944 TSPAN9O75954 239 aa11.86□□□□□ -0.51
CBWD1-225ENST00000616944 DFFBO76075 338 aa11.86□□□□□ -0.51
CBWD1-225ENST00000616944 BRI3O95415 125 aa11.86□□□□□ -0.51
CBWD1-225ENST00000616944 GPX4P36969 197 aaPredicted RBP11.86□□□□□ -0.51
CBWD1-225ENST00000616944 EXOSC2Q13868 293 aaKnown RBP11.86□□□□□ -0.51
CBWD1-225ENST00000616944 ZNF266Q14584 549 aa11.86□□□□□ -0.51
CBWD1-225ENST00000616944 MLANAQ16655 118 aa11.86□□□□□ -0.51
CBWD1-225ENST00000616944 SLC25A24Q6NUK1 477 aa11.86□□□□□ -0.51
CBWD1-225ENST00000616944 Q6ZSV7 163 aa11.86□□□□□ -0.51
CBWD1-225ENST00000616944 SLC51BQ86UW2 128 aa11.86□□□□□ -0.51
CBWD1-225ENST00000616944 ZNF471Q9BX82 626 aaPredicted RBP11.86□□□□□ -0.51
CBWD1-225ENST00000616944 ARV1Q9H2C2 271 aa11.86□□□□□ -0.51
CBWD1-225ENST00000616944 SERTAD4Q9NUC0 356 aa11.86□□□□□ -0.51
CBWD1-225ENST00000616944 JTBO76095 146 aa11.86□□□□□ -0.51
CBWD1-225ENST00000616944 IGLV1-40P01703 118 aa11.86□□□□□ -0.51
CBWD1-225ENST00000616944 OPRK1P41145 380 aa11.86□□□□□ -0.51
CBWD1-225ENST00000616944 SLC16A13Q7RTY0 426 aa11.86□□□□□ -0.51
CBWD1-225ENST00000616944 MISP3Q96FF7 219 aa11.86□□□□□ -0.51
CBWD1-225ENST00000616944 PARD6GQ9BYG4 376 aaPredicted RBP11.86□□□□□ -0.51
CBWD1-225ENST00000616944 UQCC1Q9NVA1 299 aa11.86□□□□□ -0.51
CBWD1-225ENST00000616944 GAMTQ14353 236 aa11.85□□□□□ -0.51
CBWD1-225ENST00000616944 TREML4Q6UXN2 200 aa11.85□□□□□ -0.51
CBWD1-225ENST00000616944 MRPL36Q9P0J6 103 aaKnown RBP11.85□□□□□ -0.51
CBWD1-225ENST00000616944 LSM4Q9Y4Z0 139 aaKnown RBP11.85□□□□□ -0.51
CBWD1-225ENST00000616944 UBE2L5PA0A1B0GUS4 154 aa11.84□□□□□ -0.51
CBWD1-225ENST00000616944 H3BUA1 57 aa11.84□□□□□ -0.51
CBWD1-225ENST00000616944 CYB5BO43169 146 aa11.84□□□□□ -0.51
CBWD1-225ENST00000616944 TCF21O43680 179 aa11.84□□□□□ -0.51
CBWD1-225ENST00000616944 MT-CO2P00403 227 aa11.84□□□□□ -0.51
CBWD1-225ENST00000616944 HIST1H1BP16401 226 aaKnown RBP11.84□□□□□ -0.51
CBWD1-225ENST00000616944 TMEM116Q8NCL8 245 aa11.84□□□□□ -0.51
CBWD1-225ENST00000616944 ST8SIA2Q92186 375 aa11.84□□□□□ -0.51
CBWD1-225ENST00000616944 TAF15Q92804 592 aaKnown RBP eCLIP11.84□□□□□ -0.51
CBWD1-225ENST00000616944 GON7Q9BXV9 100 aa11.84□□□□□ -0.51
CBWD1-225ENST00000616944 WDR61Q9GZS3 305 aaKnown RBP11.84□□□□□ -0.51
CBWD1-225ENST00000616944 WDR83OSQ9Y284 106 aa11.84□□□□□ -0.51
CBWD1-225ENST00000616944 IGKV1OR2-108A0A075B7D4 117 aa11.83□□□□□ -0.52
CBWD1-225ENST00000616944 BORCS7-ASMTA0A0B4J1R7 106 aa11.83□□□□□ -0.52
CBWD1-225ENST00000616944 IGHG4P01861 327 aa11.83□□□□□ -0.52
CBWD1-225ENST00000616944 IFITM2Q01629 132 aa11.83□□□□□ -0.52
CBWD1-225ENST00000616944 ETFRF1Q6IPR1 90 aa11.83□□□□□ -0.52
CBWD1-225ENST00000616944 BAP18Q8IXM2 172 aa11.83□□□□□ -0.52
CBWD1-225ENST00000616944 OR2T6Q8NHC8 308 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms