RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 HSPB7Q9UBY9 170 aa13.64□□□□□ -0.23
TRAPPC3-209ENST00000616395 A0A0G2JRQ6 117 aa13.64□□□□□ -0.23
TRAPPC3-209ENST00000616395 LINC01548A6NM66 108 aa13.64□□□□□ -0.23
TRAPPC3-209ENST00000616395 DFFBO76075 338 aa13.64□□□□□ -0.23
TRAPPC3-209ENST00000616395 INSL3P51460 131 aa13.64□□□□□ -0.23
TRAPPC3-209ENST00000616395 SPCS3P61009 180 aa13.64□□□□□ -0.23
TRAPPC3-209ENST00000616395 UBE2KP61086 200 aa13.64□□□□□ -0.23
TRAPPC3-209ENST00000616395 RPS16P62249 146 aaKnown RBP13.64□□□□□ -0.23
TRAPPC3-209ENST00000616395 TMEM177Q53S58 311 aa13.64□□□□□ -0.23
TRAPPC3-209ENST00000616395 SSX9Q7RTT3 188 aa13.64□□□□□ -0.23
TRAPPC3-209ENST00000616395 OR8H3Q8N146 312 aa13.64□□□□□ -0.23
TRAPPC3-209ENST00000616395 LRRC20Q8TCA0 184 aa13.64□□□□□ -0.23
TRAPPC3-209ENST00000616395 ST6GALNAC6Q969X2 333 aa13.64□□□□□ -0.23
TRAPPC3-209ENST00000616395 HARBI1Q96MB7 349 aa13.64□□□□□ -0.23
TRAPPC3-209ENST00000616395 TMEM140Q9NV12 185 aa13.64□□□□□ -0.23
TRAPPC3-209ENST00000616395 PLECQ15149 4684 aaKnown RBP13.63□□□□□ -0.23
TRAPPC3-209ENST00000616395 IGHV3-72A0A0B4J1Y9 119 aa13.63□□□□□ -0.23
TRAPPC3-209ENST00000616395 H0YJW9 148 aa13.63□□□□□ -0.23
TRAPPC3-209ENST00000616395 SPDEFO95238 335 aa13.63□□□□□ -0.23
TRAPPC3-209ENST00000616395 IGHG2P01859 326 aa13.63□□□□□ -0.23
TRAPPC3-209ENST00000616395 FGF2P09038 288 aa13.63□□□□□ -0.23
TRAPPC3-209ENST00000616395 P0C879 139 aa13.63□□□□□ -0.23
TRAPPC3-209ENST00000616395 FHL3Q13643 280 aa13.63□□□□□ -0.23
TRAPPC3-209ENST00000616395 MOB3BQ86TA1 216 aa13.63□□□□□ -0.23
TRAPPC3-209ENST00000616395 ZNF429Q86V71 674 aa13.63□□□□□ -0.23
TRAPPC3-209ENST00000616395 SCARB1Q8WTV0 552 aa13.63□□□□□ -0.23
TRAPPC3-209ENST00000616395 TSNAXQ99598 290 aaKnown RBP13.63□□□□□ -0.23
TRAPPC3-209ENST00000616395 RNF5Q99942 180 aa13.63□□□□□ -0.23
TRAPPC3-209ENST00000616395 BET1LQ9NYM9 111 aa13.63□□□□□ -0.23
TRAPPC3-209ENST00000616395 BRWD1-AS2P59051 145 aa13.62□□□□□ -0.23
TRAPPC3-209ENST00000616395 THNSL2Q86YJ6 484 aa13.62□□□□□ -0.23
TRAPPC3-209ENST00000616395 BAP18Q8IXM2 172 aa13.62□□□□□ -0.23
TRAPPC3-209ENST00000616395 OR1S2Q8NGQ3 325 aa13.62□□□□□ -0.23
TRAPPC3-209ENST00000616395 STOML3Q8TAV4 291 aa13.62□□□□□ -0.23
TRAPPC3-209ENST00000616395 DTD1Q8TEA8 209 aa13.62□□□□□ -0.23
TRAPPC3-209ENST00000616395 ST8SIA2Q92186 375 aa13.62□□□□□ -0.23
TRAPPC3-209ENST00000616395 RBKSQ9H477 322 aa13.62□□□□□ -0.23
TRAPPC3-209ENST00000616395 STRAPQ9Y3F4 350 aaKnown RBP13.62□□□□□ -0.23
TRAPPC3-209ENST00000616395 NXPH3O95157 252 aa13.61□□□□□ -0.23
TRAPPC3-209ENST00000616395 IFNA5P01569 189 aa13.61□□□□□ -0.23
TRAPPC3-209ENST00000616395 SULT1A1P50225 295 aa13.61□□□□□ -0.23
TRAPPC3-209ENST00000616395 EWSR1Q01844 656 aaKnown RBP eCLIP13.61□□□□□ -0.23
TRAPPC3-209ENST00000616395 EXOSC2Q13868 293 aaKnown RBP13.61□□□□□ -0.23
TRAPPC3-209ENST00000616395 HNF4GQ14541 408 aa13.61□□□□□ -0.23
TRAPPC3-209ENST00000616395 OR4A47Q6IF82 309 aa13.61□□□□□ -0.23
TRAPPC3-209ENST00000616395 Q6ZRM9 215 aa13.61□□□□□ -0.23
TRAPPC3-209ENST00000616395 TMEM252Q8N6L7 170 aa13.61□□□□□ -0.23
TRAPPC3-209ENST00000616395 ZNF257Q9Y2Q1 563 aa13.61□□□□□ -0.23
TRAPPC3-209ENST00000616395 C15orf61A6NNL5 157 aa13.6□□□□□ -0.23
TRAPPC3-209ENST00000616395 FGF16O43320 207 aa13.6□□□□□ -0.23
TRAPPC3-209ENST00000616395 IGKV1D-33P01593 117 aa13.6□□□□□ -0.23
TRAPPC3-209ENST00000616395 IGKV1-33P01594 117 aa13.6□□□□□ -0.23
TRAPPC3-209ENST00000616395 TMEM11P17152 192 aa13.6□□□□□ -0.23
TRAPPC3-209ENST00000616395 ATP5IP56385 69 aaPredicted RBP13.6□□□□□ -0.23
TRAPPC3-209ENST00000616395 HES1Q14469 280 aa13.6□□□□□ -0.23
TRAPPC3-209ENST00000616395 IZUMO4Q1ZYL8 232 aa13.6□□□□□ -0.23
TRAPPC3-209ENST00000616395 AARDQ4LEZ3 155 aa13.6□□□□□ -0.23
TRAPPC3-209ENST00000616395 SLC25A24Q6NUK1 477 aa13.6□□□□□ -0.23
TRAPPC3-209ENST00000616395 OR11H1Q8NG94 326 aa13.6□□□□□ -0.23
TRAPPC3-209ENST00000616395 C4orf3Q8WVX3 66 aa13.6□□□□□ -0.23
TRAPPC3-209ENST00000616395 COMMD5Q9GZQ3 224 aa13.6□□□□□ -0.23
TRAPPC3-209ENST00000616395 FBXL17Q9UF56 701 aa13.6□□□□□ -0.23
TRAPPC3-209ENST00000616395 FOXA2Q9Y261 457 aaPredicted RBP13.6□□□□□ -0.23
TRAPPC3-209ENST00000616395 IGHV1-3A0A0C4DH29 117 aa13.59□□□□□ -0.23
TRAPPC3-209ENST00000616395 FAM24AA6NFZ4 105 aa13.59□□□□□ -0.23
TRAPPC3-209ENST00000616395 MSGN1A6NI15 193 aa13.59□□□□□ -0.23
TRAPPC3-209ENST00000616395 ACTL6BO94805 426 aa13.59□□□□□ -0.23
TRAPPC3-209ENST00000616395 KBTBD11O94819 623 aa13.59□□□□□ -0.23
TRAPPC3-209ENST00000616395 IAPPP10997 89 aa13.59□□□□□ -0.23
TRAPPC3-209ENST00000616395 GP9P14770 177 aa13.59□□□□□ -0.23
TRAPPC3-209ENST00000616395 CD1BP29016 333 aa13.59□□□□□ -0.23
TRAPPC3-209ENST00000616395 HOXA1P49639 335 aaPredicted RBP13.59□□□□□ -0.23
TRAPPC3-209ENST00000616395 F2RL1P55085 397 aa13.59□□□□□ -0.23
TRAPPC3-209ENST00000616395 LINC00205P59089 165 aa13.59□□□□□ -0.23
TRAPPC3-209ENST00000616395 HSPE1P61604 102 aaKnown RBP13.59□□□□□ -0.23
TRAPPC3-209ENST00000616395 RAB11AP62491 216 aa13.59□□□□□ -0.23
TRAPPC3-209ENST00000616395 FOXE3Q13461 319 aa13.59□□□□□ -0.23
TRAPPC3-209ENST00000616395 ATP6V1FQ16864 119 aa13.59□□□□□ -0.23
TRAPPC3-209ENST00000616395 LILRB2Q8N423 598 aa13.59□□□□□ -0.23
TRAPPC3-209ENST00000616395 RNF152Q8N8N0 203 aa13.59□□□□□ -0.23
TRAPPC3-209ENST00000616395 OR5B3Q8NH48 314 aa13.59□□□□□ -0.23
TRAPPC3-209ENST00000616395 PINX1Q96BK5 328 aaKnown RBP13.59□□□□□ -0.23
TRAPPC3-209ENST00000616395 HEYLQ9NQ87 328 aaPredicted RBP13.59□□□□□ -0.23
TRAPPC3-209ENST00000616395 FRAS1Q86XX4 4008 aa13.58□□□□□ -0.24
TRAPPC3-209ENST00000616395 AP4M1O00189 453 aa13.58□□□□□ -0.24
TRAPPC3-209ENST00000616395 UPK2O00526 184 aa13.58□□□□□ -0.24
TRAPPC3-209ENST00000616395 SPANXN5Q5MJ07 72 aa13.58□□□□□ -0.24
TRAPPC3-209ENST00000616395 TEX45Q8NA69 505 aa13.58□□□□□ -0.24
TRAPPC3-209ENST00000616395 UBAC2Q8NBM4 344 aa13.58□□□□□ -0.24
TRAPPC3-209ENST00000616395 QTRT1Q9BXR0 403 aaKnown RBP13.58□□□□□ -0.24
TRAPPC3-209ENST00000616395 SLC25A32Q9H2D1 315 aa13.58□□□□□ -0.24
TRAPPC3-209ENST00000616395 C11orf1Q9H5F2 150 aa13.58□□□□□ -0.24
TRAPPC3-209ENST00000616395 OR51B2Q9Y5P1 312 aa13.58□□□□□ -0.24
TRAPPC3-209ENST00000616395 A0A1W2PN81 502 aa13.57□□□□□ -0.24
TRAPPC3-209ENST00000616395 ELANEP08246 267 aa13.57□□□□□ -0.24
TRAPPC3-209ENST00000616395 OR9G9P0C7N8 305 aa13.57□□□□□ -0.24
TRAPPC3-209ENST00000616395 MAS1LP35410 378 aa13.57□□□□□ -0.24
TRAPPC3-209ENST00000616395 CHRNA7P36544 502 aa13.57□□□□□ -0.24
TRAPPC3-209ENST00000616395 HTR2BP41595 481 aa13.57□□□□□ -0.24
TRAPPC3-209ENST00000616395 OR2B8PP59922 312 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms